BP918050
Clone id YMU001_000109_A09
Library
Length 162
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACCTCTTTCATTGTTATCCCTTTAAAGGGAAGAACGTGTCTAGCATACAAAAAGTGGTA
TGACCCCACATGAATAAAAACTCAAATGTTGAGGTTTATCTATACAGACACTTCCGCTTC
GGGCGGTAGAGGAGCCAAAACCTGACAGCTTCTTTCTTTGGA
■■Homology search results ■■ -
sp_hit_id Q9PRB3
Definition sp|Q9PRB3|Y032_UREPA Uncharacterized protein UU032 OS=Ureaplasma parvum
Align length 37
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918050|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A09.
(162 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9PRB3|Y032_UREPA Uncharacterized protein UU032 OS=Ureaplasma... 29 8.4

>sp|Q9PRB3|Y032_UREPA Uncharacterized protein UU032 OS=Ureaplasma
parvum GN=UU032 PE=4 SV=1
Length = 175

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +1

Query: 10 HCYPFKGKNVSS----IQKVV*PHMNKNSNVEVYLYR 108
HC+P K NV S + K + P++ KN N E+ LY+
Sbjct: 82 HCHPIKQNNVFSKYIKLIKKLHPNLLKNDNEELELYQ 118


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918050|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A09.
(162 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******