BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918053|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A12.
         (454 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25585|FYV5_YEAST Protein FYV5 OS=Saccharomyces cerevisiae GN...    30   4.8  
sp|P16154|TOXA_CLODI Toxin A OS=Clostridium difficile GN=toxA PE...    29   8.4  
sp|O17657|NH164_CAEEL Nuclear hormone receptor family member nhr...    29   8.4  

>sp|P25585|FYV5_YEAST Protein FYV5 OS=Saccharomyces cerevisiae
           GN=FYV5 PE=4 SV=1
          Length = 152

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 15  SSSCQMKRESNCLASNTLMLSGFATVSVLLFLCSINHILFFCAF 146
           + SC +   S+     +L+L  F+T + +LFL ++   LFFC F
Sbjct: 71  AGSCVLASRSSVGIIVSLLLFNFSTCNFVLFLSAVLIDLFFCTF 114


>sp|P16154|TOXA_CLODI Toxin A OS=Clostridium difficile GN=toxA PE=1
            SV=2
          Length = 2710

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 274  SIKGTKVYFYMVGNWVSFRKKLGYFVFSQQHLYLNTDGMI 393
            +I G K YF    N  +     GY + S +H Y NTDG++
Sbjct: 2485 TINGKKYYF----NTNTSIASTGYTIISGKHFYFNTDGIM 2520


>sp|O17657|NH164_CAEEL Nuclear hormone receptor family member
           nhr-164 OS=Caenorhabditis elegans GN=nhr-164 PE=2 SV=1
          Length = 389

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -1

Query: 133 KRI*LMLQRKRSTLTVAKPE-SINVFDARQFDSLFIWQLL 17
           KR+  +++  +STL ++  +  +N+F+   F S F+W+L+
Sbjct: 264 KRLKELIEHVKSTLLISLSQLKLNIFEFAAFKSFFVWKLV 303

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918053|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_A12.
         (454 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4J0Q6|B4J0Q6_DROGR GH14434 OS=Drosophila grimshawi GN=GH1443...    34   3.2  
tr|B3TZ24|B3TZ24_9ABAC Hz18-like protein OS=Ampelophaga rubigino...    33   5.4  
tr|Q66TT4|Q66TT4_9HIV1 Envelope glycoprotein OS=Human immunodefi...    33   7.1  
tr|Q0N485|Q0N485_9ABAC Hz18-like protein OS=Clanis bilineata nuc...    33   7.1  

>tr|B4J0Q6|B4J0Q6_DROGR GH14434 OS=Drosophila grimshawi GN=GH14434
           PE=4 SV=1
          Length = 599

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 160 SKYPQTHAVFLQFWLVCSCCAIKLTHLLHVLAIH**TSSIKGTKVYFYMVGNWV 321
           S+YP  HAV    W + +CC    TH L  L +   + ++ G+K   +M+  +V
Sbjct: 378 SQYPIMHAVRFFAWRITNCCFCWFTHTLIALGLSLNSVNLGGSKYNNFMLNGFV 431


>tr|B3TZ24|B3TZ24_9ABAC Hz18-like protein OS=Ampelophaga rubiginosa
           nucleopolyhedrovirus PE=4 SV=1
          Length = 133

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = -2

Query: 378 IQIKMLLGKNKIS*FLPK*YPIPNHVKIDLCTLDR*CLLMNCQHMKEMCKFNGTTRTNKP 199
           ++IK +L K     F+P  Y         L TL++ C+  +C+  K+  + NG T T   
Sbjct: 38  LRIKNMLNKRIFDRFVPHVY---------LVTLNKQCVFKSCEQFKDSEQPNGATYTTDG 88

Query: 198 KLEKYSV 178
           KL+ Y V
Sbjct: 89  KLKYYLV 95


>tr|Q66TT4|Q66TT4_9HIV1 Envelope glycoprotein OS=Human
           immunodeficiency virus 1 GN=env PE=4 SV=1
          Length = 847

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
 Frame = -2

Query: 270 CLLMNCQH---------MKEM--CKFNGTTRTNKPKLEKYSVGLRILTGPIEEKHRKKGY 124
           C+ +NC +         MKE+  C FN TT     K ++Y++  R    PI+EK+ K  Y
Sbjct: 125 CVTLNCTNANSSADNDIMKEIKNCSFNTTTEIRDRKKKEYALFYRPDIVPIDEKNNKSSY 184


>tr|Q0N485|Q0N485_9ABAC Hz18-like protein OS=Clanis bilineata
           nucleopolyhedrosis virus PE=4 SV=1
          Length = 133

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = -2

Query: 378 IQIKMLLGKNKIS*FLPK*YPIPNHVKIDLCTLDR*CLLMNCQHMKEMCKFNGTTRTNKP 199
           ++IK +L K     F+P  Y         L TL++ C+L +C+  ++  + NG T T   
Sbjct: 38  LRIKNMLNKRIFDRFVPHVY---------LVTLNKQCVLKSCKQFEDSEQPNGATYTTDG 88

Query: 198 KLEKYSV 178
           KL+ Y V
Sbjct: 89  KLKYYLV 95