BP918055 |
Clone id |
YMU001_000109_B02 |
Library |
YMU01 |
Length |
337 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000109_B02. |
Accession |
BP918055 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1749Contig1 |
Sequence |
GAGGCAAATTCAACTCCCTCAGATATCGTTGCAGCTCTCCATGGTGCCTGAGCATCAGTA CCCGCCTTTGGTCCTCTTCAAGTGTAAAGTGGGACATGTGGAAGGAGGGTGTTACTTGCC TACATGTTATCATGCAGGATCTTGGATGCCTAAATCTGTTTTTGTGGAGATGTCAAGCTC AACATGTACGTCTCCTGGATGACTACCACCAACTGTCATCATCACTCTCGCGCCTTGGTG GATATGCATATCTTTTCCTAATGATACTACCCCGAGTTGGTCTACCCACTGGAGTGATGG CACACTTATCTACTCACCTCACTCACTAGCAGTTTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q06GY5 |
Definition |
sp|Q06GY5|CEMA_DRIGR Chloroplast envelope membrane protein OS=Drimys granadensis |
Align length |
30 |
Score (bit) |
33.9 |
E-value |
0.26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6MF20 |
Definition |
tr|B6MF20|B6MF20_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae |
Align length |
49 |
Score (bit) |
38.5 |
E-value |
0.17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918055|Adiantum capillus-veneris mRNA, clone: YMU001_000109_B02. (337 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6MF20|B6MF20_BRAFL Putative uncharacterized protein OS=Branc... 39 0.17 tr|Q01TN4|Q01TN4_SOLUE Putative uncharacterized protein OS=Solib... 37 0.38 tr|B6NNS3|B6NNS3_BRAFL Putative uncharacterized protein (Fragmen... 37 0.38 tr|B6NNS1|B6NNS1_BRAFL Putative uncharacterized protein (Fragmen... 37 0.38 tr|B6MF18|B6MF18_BRAFL Putative uncharacterized protein OS=Branc... 35 1.4 tr|B6LIT0|B6LIT0_BRAFL Putative uncharacterized protein (Fragmen... 35 1.4 tr|B6MF10|B6MF10_BRAFL Putative uncharacterized protein (Fragmen... 34 4.2 tr|B6MY97|B6MY97_BRAFL Putative uncharacterized protein OS=Branc... 33 5.5 tr|B6L167|B6L167_BRAFL Putative uncharacterized protein (Fragmen... 33 5.5 tr|B6NNT0|B6NNT0_BRAFL Putative uncharacterized protein (Fragmen... 33 7.2 tr|B6L161|B6L161_BRAFL Putative uncharacterized protein (Fragmen... 33 7.2 tr|A7VLW0|A7VLW0_9VIRU Putative uncharacterized protein OS=Torqu... 33 9.3 tr|A8L114|A8L114_FRASN Protein serine phosphatase with GAF(S) se... 33 9.3 tr|Q9GDV0|Q9GDV0_CARCL CemA (Fragment) OS=Carpobrotus chilensis ... 33 9.3 tr|B6PD07|B6PD07_BRAFL Putative uncharacterized protein (Fragmen... 33 9.3 tr|B6N8L2|B6N8L2_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3
>tr|B6MF20|B6MF20_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_81633 PE=4 SV=1 Length = 1263
Score = 38.5 bits (88), Expect = 0.17 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSWM-PKSVFVEMSSSTCTSP 196 H YP V F C G+V G TC GSW P + +S T+P Sbjct: 670 HNYPATVTFTCNTGYVRNGAETTTCQADGSWSNPTPTCIPVSCPALTAP 718
>tr|Q01TN4|Q01TN4_SOLUE Putative uncharacterized protein OS=Solibacter usitatus (strain Ellin6076) GN=Acid_6051 PE=3 SV=1 Length = 564
Score = 37.4 bits (85), Expect = 0.38 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = +2
Query: 62 PPLVLFKCKVGHVEGGCYLPTCYHAGSWMPKSVFVEMSSSTCTSPG*LPPTVIITLAPWW 241 P L+L C + + G + Y GS +P + ++S+T +P I T WW Sbjct: 13 PLLILATCGLSFADYGDTVYFTYQIGSTIPSPQYSTITSTTTRQ---IPNLAIRTSGQWW 69
Query: 242 ICISFPNDTTPSWST 286 I S + TTPS T Sbjct: 70 IQASLSSTTTPSTLT 84
>tr|B6NNS3|B6NNS3_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_233277 PE=4 SV=1 Length = 276
Score = 37.4 bits (85), Expect = 0.38 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW-MPKSVFVEMSSSTC 187 H YP V F C G+V G TC + GSW P + S C Sbjct: 225 HNYPVTVTFTCNTGYVRNGAVTTTCQNDGSWSKPVPTCTQTRKSIC 270
>tr|B6NNS1|B6NNS1_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_176545 PE=4 SV=1 Length = 255
Score = 37.4 bits (85), Expect = 0.38 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +2
Query: 47 PEHQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145 P H YP V F C G+V G TC GSW Sbjct: 216 PLHSYPVTVTFTCNAGYVRNGAQTTTCQTDGSW 248
>tr|B6MF18|B6MF18_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_81631 PE=4 SV=1 Length = 992
Score = 35.4 bits (80), Expect = 1.4 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145 H YP V F C G+V G TC GSW Sbjct: 530 HNYPVTVTFTCNTGYVRNGAATTTCQTDGSW 560
Score = 33.9 bits (76), Expect = 4.2 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSWMPKSVFVEMSSSTCT 190 H YP V F C G+V G TC G+W S TCT Sbjct: 589 HNYPVTVTFTCNTGYVRNGDQTTTCQADGTW-------SNHSPTCT 627
>tr|B6LIT0|B6LIT0_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_187059 PE=4 SV=1 Length = 261
Score = 35.4 bits (80), Expect = 1.4 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145 H YP V F C GHV G C GSW Sbjct: 224 HNYPATVTFSCNAGHVVNGAETTKCQTDGSW 254
>tr|B6MF10|B6MF10_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_135646 PE=4 SV=1 Length = 606
Score = 33.9 bits (76), Expect = 4.2 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSWMPKSVFVEMSSSTCT 190 H YP V F C G+V G TC G+W S TCT Sbjct: 382 HNYPVTVTFTCNTGYVRNGDQTTTCQADGTW-------SNHSPTCT 420
>tr|B6MY97|B6MY97_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_88271 PE=4 SV=1 Length = 1873
Score = 33.5 bits (75), Expect = 5.5 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145 H YP V F C G+V G C GSW Sbjct: 339 HSYPATVTFTCNPGYVRNGAQTTVCQTDGSW 369
>tr|B6L167|B6L167_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_200877 PE=4 SV=1 Length = 472
Score = 33.5 bits (75), Expect = 5.5 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Frame = +2
Query: 47 PEHQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW---MPKSVFVEMSSSTCTSPG*LPPT- 214 P + YP V F C +G+V G TC G+W +P V ++T P P Sbjct: 182 PAYSYPSTVTFTCNLGYVRIGASSTTCQADGTWSNPVPICTVVFFFTNTVVCPMLTAPPN 241
Query: 215 -VIITLAPWWICISFPNDTT 271 + + P++ +PN T Sbjct: 242 GALSPIGPYF----YPNQVT 257
>tr|B6NNT0|B6NNT0_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_233160 PE=4 SV=1 Length = 589
Score = 33.1 bits (74), Expect = 7.2 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +2
Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145 H YP V F C G+V G C G+W Sbjct: 538 HNYPATVTFTCNTGYVRNGAQTTVCQTDGTW 568
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