BP918055
Clone id YMU001_000109_B02
Library
Length 337
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGGCAAATTCAACTCCCTCAGATATCGTTGCAGCTCTCCATGGTGCCTGAGCATCAGTA
CCCGCCTTTGGTCCTCTTCAAGTGTAAAGTGGGACATGTGGAAGGAGGGTGTTACTTGCC
TACATGTTATCATGCAGGATCTTGGATGCCTAAATCTGTTTTTGTGGAGATGTCAAGCTC
AACATGTACGTCTCCTGGATGACTACCACCAACTGTCATCATCACTCTCGCGCCTTGGTG
GATATGCATATCTTTTCCTAATGATACTACCCCGAGTTGGTCTACCCACTGGAGTGATGG
CACACTTATCTACTCACCTCACTCACTAGCAGTTTAC
■■Homology search results ■■ -
sp_hit_id Q06GY5
Definition sp|Q06GY5|CEMA_DRIGR Chloroplast envelope membrane protein OS=Drimys granadensis
Align length 30
Score (bit) 33.9
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918055|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B02.
(337 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q06GY5|CEMA_DRIGR Chloroplast envelope membrane protein OS=Dr... 34 0.26
sp|Q09G34|CEMA_PLAOC Chloroplast envelope membrane protein OS=Pl... 33 0.44
sp|A6MMD4|CEMA_CHLSC Chloroplast envelope membrane protein OS=Ch... 33 0.44
sp|Q09FU9|CEMA_NANDO Chloroplast envelope membrane protein OS=Na... 33 0.58
sp|Q2L922|CEMA_GOSHI Chloroplast envelope membrane protein OS=Go... 32 0.76
sp|A0ZZ47|CEMA_GOSBA Chloroplast envelope membrane protein OS=Go... 32 0.76
sp|Q0G9K7|CEMA_LIRTU Chloroplast envelope membrane protein OS=Li... 32 0.99
sp|Q09MG6|CEMA_CITSI Chloroplast envelope membrane protein OS=Ci... 32 0.99
sp|A6MM48|CEMA_BUXMI Chloroplast envelope membrane protein OS=Bu... 32 0.99
sp|Q06GP8|CEMA_PIPCE Chloroplast envelope membrane protein OS=Pi... 32 1.3
sp|A6MML9|CEMA_DIOEL Chloroplast envelope membrane protein OS=Di... 32 1.3
sp|Q2QD77|CEMA_CUCSA Chloroplast envelope membrane protein OS=Cu... 31 1.7
sp|A8SEB5|CEMA_CERDE Chloroplast envelope membrane protein OS=Ce... 31 1.7
sp|Q3V523|CEMA_ACOCL Chloroplast envelope membrane protein OS=Ac... 31 2.2
sp|A9LYB2|CEMA_ACOAM Chloroplast envelope membrane protein OS=Ac... 31 2.2
sp|Q68RZ4|CEMA_PANGI Chloroplast envelope membrane protein OS=Pa... 30 2.9
sp|Q0G9V0|CEMA_DAUCA Chloroplast envelope membrane protein OS=Da... 30 2.9
sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and... 30 3.8
sp|Q96L50|LLR1_HUMAN Peptidylprolyl isomerase-like 5 OS=Homo sap... 30 3.8
sp|Q7YJW1|CEMA_CALFG Chloroplast envelope membrane protein OS=Ca... 30 3.8
sp|P19070|CR2_MOUSE Complement receptor type 2 OS=Mus musculus G... 30 4.9
sp|Q3BAM9|CEMA_PHAAO Chloroplast envelope membrane protein OS=Ph... 30 4.9
sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF a... 29 6.4
sp|Q71E53|CEMA_FAGSY Chloroplast envelope membrane protein OS=Fa... 29 6.4
sp|A0A347|CEMA_COFAR Chloroplast envelope membrane protein OS=Co... 29 6.4
sp|P02920|LACY_ECOLI Lactose permease OS=Escherichia coli (strai... 29 8.4
sp|P49295|HEM12_CUCSA Glutamyl-tRNA reductase 2, chloroplastic O... 29 8.4
sp|Q9Z7L5|CSD_CHLPN Probable cysteine desulfurase OS=Chlamydia p... 29 8.4
sp|Q0ZJ08|CEMA_VITVI Chloroplast envelope membrane protein OS=Vi... 29 8.4
sp|Q09X05|CEMA_MORIN Chloroplast envelope membrane protein OS=Mo... 29 8.4

>sp|Q06GY5|CEMA_DRIGR Chloroplast envelope membrane protein
OS=Drimys granadensis GN=cemA PE=3 SV=1
Length = 236

Score = 33.9 bits (76), Expect = 0.26
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2

Query: 203 LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
LP I PWWI +SF N + W THW
Sbjct: 11 LPYLASIVFLPWWISLSF-NKSLEPWVTHW 39


>sp|Q09G34|CEMA_PLAOC Chloroplast envelope membrane protein
OS=Platanus occidentalis GN=cemA PE=3 SV=1
Length = 229

Score = 33.1 bits (74), Expect = 0.44
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2

Query: 203 LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
LP I PWWI +SF N + SW T+W
Sbjct: 10 LPYLASIVFLPWWISLSF-NKSLESWITNW 38


>sp|A6MMD4|CEMA_CHLSC Chloroplast envelope membrane protein
OS=Chloranthus spicatus GN=cemA PE=3 SV=1
Length = 242

Score = 33.1 bits (74), Expect = 0.44
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2

Query: 188 TSPG*LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
++P P I L PWWI +SF P W THW
Sbjct: 14 STPLPFPYLASIVLLPWWISLSFKKCFEP-WVTHW 47


>sp|Q09FU9|CEMA_NANDO Chloroplast envelope membrane protein
OS=Nandina domestica GN=cemA PE=3 SV=1
Length = 229

Score = 32.7 bits (73), Expect = 0.58
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2

Query: 203 LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
LP I PWWI SF N + SW HW
Sbjct: 10 LPYLASIVFLPWWISFSF-NKSLESWVIHW 38


>sp|Q2L922|CEMA_GOSHI Chloroplast envelope membrane protein
OS=Gossypium hirsutum GN=cemA PE=3 SV=1
Length = 229

Score = 32.3 bits (72), Expect = 0.76
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2

Query: 221 ITLAPWWICISFPNDTTPSWSTHWSD 298
I PWWI +SF N + SW T+W D
Sbjct: 16 IVFLPWWISLSF-NKSLKSWITNWWD 40


>sp|A0ZZ47|CEMA_GOSBA Chloroplast envelope membrane protein
OS=Gossypium barbadense GN=cemA PE=3 SV=1
Length = 229

Score = 32.3 bits (72), Expect = 0.76
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2

Query: 221 ITLAPWWICISFPNDTTPSWSTHWSD 298
I PWWI +SF N + SW T+W D
Sbjct: 16 IVFLPWWISLSF-NKSLKSWITNWWD 40


>sp|Q0G9K7|CEMA_LIRTU Chloroplast envelope membrane protein
OS=Liriodendron tulipifera GN=cemA PE=3 SV=1
Length = 229

Score = 32.0 bits (71), Expect = 0.99
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2

Query: 203 LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
LP I PWWI ISF N + W T+W
Sbjct: 10 LPYLASIVFLPWWISISF-NKSLEPWVTNW 38


>sp|Q09MG6|CEMA_CITSI Chloroplast envelope membrane protein
OS=Citrus sinensis GN=cemA PE=3 SV=1
Length = 234

Score = 32.0 bits (71), Expect = 0.99
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2

Query: 203 LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
L V + PWWI +SF N + SW T+W
Sbjct: 13 LSSIVFVVFLPWWIPLSF-NKSLESWVTNW 41


>sp|A6MM48|CEMA_BUXMI Chloroplast envelope membrane protein OS=Buxus
microphylla GN=cemA PE=3 SV=1
Length = 226

Score = 32.0 bits (71), Expect = 0.99
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2

Query: 203 LPPTVIITLAPWWICISFPNDTTPSWSTHW 292
LP I PWWI +SF N SW T+W
Sbjct: 10 LPYLASIVFLPWWISLSF-NKWLESWVTNW 38


>sp|Q06GP8|CEMA_PIPCE Chloroplast envelope membrane protein OS=Piper
cenocladum GN=cemA PE=3 SV=1
Length = 229

Score = 31.6 bits (70), Expect = 1.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2

Query: 206 PPTVIITLAPWWICISFPNDTTPSWSTHW 292
P V I PWWI +SF P W T+W
Sbjct: 11 PYLVSIVFLPWWISLSFQKSLEP-WITNW 38


tr_hit_id B6MF20
Definition tr|B6MF20|B6MF20_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 49
Score (bit) 38.5
E-value 0.17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918055|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B02.
(337 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6MF20|B6MF20_BRAFL Putative uncharacterized protein OS=Branc... 39 0.17
tr|Q01TN4|Q01TN4_SOLUE Putative uncharacterized protein OS=Solib... 37 0.38
tr|B6NNS3|B6NNS3_BRAFL Putative uncharacterized protein (Fragmen... 37 0.38
tr|B6NNS1|B6NNS1_BRAFL Putative uncharacterized protein (Fragmen... 37 0.38
tr|B6MF18|B6MF18_BRAFL Putative uncharacterized protein OS=Branc... 35 1.4
tr|B6LIT0|B6LIT0_BRAFL Putative uncharacterized protein (Fragmen... 35 1.4
tr|B6MF10|B6MF10_BRAFL Putative uncharacterized protein (Fragmen... 34 4.2
tr|B6MY97|B6MY97_BRAFL Putative uncharacterized protein OS=Branc... 33 5.5
tr|B6L167|B6L167_BRAFL Putative uncharacterized protein (Fragmen... 33 5.5
tr|B6NNT0|B6NNT0_BRAFL Putative uncharacterized protein (Fragmen... 33 7.2
tr|B6L161|B6L161_BRAFL Putative uncharacterized protein (Fragmen... 33 7.2
tr|A7VLW0|A7VLW0_9VIRU Putative uncharacterized protein OS=Torqu... 33 9.3
tr|A8L114|A8L114_FRASN Protein serine phosphatase with GAF(S) se... 33 9.3
tr|Q9GDV0|Q9GDV0_CARCL CemA (Fragment) OS=Carpobrotus chilensis ... 33 9.3
tr|B6PD07|B6PD07_BRAFL Putative uncharacterized protein (Fragmen... 33 9.3
tr|B6N8L2|B6N8L2_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3

>tr|B6MF20|B6MF20_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_81633 PE=4 SV=1
Length = 1263

Score = 38.5 bits (88), Expect = 0.17
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSWM-PKSVFVEMSSSTCTSP 196
H YP V F C G+V G TC GSW P + +S T+P
Sbjct: 670 HNYPATVTFTCNTGYVRNGAETTTCQADGSWSNPTPTCIPVSCPALTAP 718


>tr|Q01TN4|Q01TN4_SOLUE Putative uncharacterized protein
OS=Solibacter usitatus (strain Ellin6076) GN=Acid_6051
PE=3 SV=1
Length = 564

Score = 37.4 bits (85), Expect = 0.38
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2

Query: 62 PPLVLFKCKVGHVEGGCYLPTCYHAGSWMPKSVFVEMSSSTCTSPG*LPPTVIITLAPWW 241
P L+L C + + G + Y GS +P + ++S+T +P I T WW
Sbjct: 13 PLLILATCGLSFADYGDTVYFTYQIGSTIPSPQYSTITSTTTRQ---IPNLAIRTSGQWW 69

Query: 242 ICISFPNDTTPSWST 286
I S + TTPS T
Sbjct: 70 IQASLSSTTTPSTLT 84


>tr|B6NNS3|B6NNS3_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_233277 PE=4 SV=1
Length = 276

Score = 37.4 bits (85), Expect = 0.38
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW-MPKSVFVEMSSSTC 187
H YP V F C G+V G TC + GSW P + S C
Sbjct: 225 HNYPVTVTFTCNTGYVRNGAVTTTCQNDGSWSKPVPTCTQTRKSIC 270


>tr|B6NNS1|B6NNS1_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_176545 PE=4 SV=1
Length = 255

Score = 37.4 bits (85), Expect = 0.38
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2

Query: 47 PEHQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145
P H YP V F C G+V G TC GSW
Sbjct: 216 PLHSYPVTVTFTCNAGYVRNGAQTTTCQTDGSW 248


>tr|B6MF18|B6MF18_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_81631 PE=4 SV=1
Length = 992

Score = 35.4 bits (80), Expect = 1.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145
H YP V F C G+V G TC GSW
Sbjct: 530 HNYPVTVTFTCNTGYVRNGAATTTCQTDGSW 560



Score = 33.9 bits (76), Expect = 4.2
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSWMPKSVFVEMSSSTCT 190
H YP V F C G+V G TC G+W S TCT
Sbjct: 589 HNYPVTVTFTCNTGYVRNGDQTTTCQADGTW-------SNHSPTCT 627


>tr|B6LIT0|B6LIT0_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_187059 PE=4 SV=1
Length = 261

Score = 35.4 bits (80), Expect = 1.4
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145
H YP V F C GHV G C GSW
Sbjct: 224 HNYPATVTFSCNAGHVVNGAETTKCQTDGSW 254


>tr|B6MF10|B6MF10_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_135646 PE=4 SV=1
Length = 606

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSWMPKSVFVEMSSSTCT 190
H YP V F C G+V G TC G+W S TCT
Sbjct: 382 HNYPVTVTFTCNTGYVRNGDQTTTCQADGTW-------SNHSPTCT 420


>tr|B6MY97|B6MY97_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_88271 PE=4 SV=1
Length = 1873

Score = 33.5 bits (75), Expect = 5.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145
H YP V F C G+V G C GSW
Sbjct: 339 HSYPATVTFTCNPGYVRNGAQTTVCQTDGSW 369


>tr|B6L167|B6L167_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_200877 PE=4 SV=1
Length = 472

Score = 33.5 bits (75), Expect = 5.5
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = +2

Query: 47 PEHQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW---MPKSVFVEMSSSTCTSPG*LPPT- 214
P + YP V F C +G+V G TC G+W +P V ++T P P
Sbjct: 182 PAYSYPSTVTFTCNLGYVRIGASSTTCQADGTWSNPVPICTVVFFFTNTVVCPMLTAPPN 241

Query: 215 -VIITLAPWWICISFPNDTT 271
+ + P++ +PN T
Sbjct: 242 GALSPIGPYF----YPNQVT 257


>tr|B6NNT0|B6NNT0_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_233160 PE=4 SV=1
Length = 589

Score = 33.1 bits (74), Expect = 7.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2

Query: 53 HQYPPLVLFKCKVGHVEGGCYLPTCYHAGSW 145
H YP V F C G+V G C G+W
Sbjct: 538 HNYPATVTFTCNTGYVRNGAQTTVCQTDGTW 568