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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918056
Clone id YMU001_000109_B03
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TACCCATAACGACAGATATCACATTCCAGAAGGTAAAGTTTTCAATGGAGGTTTTCGCTT
TCTAGGAAAGTGGCCTGCAGCTTGTACAAAACATGCCCAGTTTTACCATAAACTGGCTGC
AATATGTCTATTAAAACAAGTACAGTGGACTATAGTATTGACTATAATACAATGCTTACA
AAAACAGAGGAAGAAAACCTTGCTTTCAGGTTATTAGGAATCTTTGTGCCCGTATTGAGG
CGGTAAGAACACACGCACTTCTCTCTCCTCTGAGACCTCTTCATGCTTGGGGATGAATAC
CTCCAACCCAGCTCCTGCCTCCATATAAAAGGCTTCTAGCTCAGCATTCTCTGGAATCCG
TGTCGCTAACGCTATTTCTCTCATAAATTCTCCAGGTGGGCAATGTTCTGGAGATGGATC
TGTAAGCTCGAAAGTGCGATCTCCCCTCTTGATATATTGGGTCCTTGCAGTGCTAGTACA
TTGGATTTTGACCACACCATGTGTGGTT
■■Homology search results ■■ -
sp_hit_id P47548
Definition sp|P47548|Y306_MYCGE Uncharacterized protein MG306 OS=Mycoplasma genitalium
Align length 32
Score (bit) 29.6
E-value 8.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918056|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B03.
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P47548|Y306_MYCGE Uncharacterized protein MG306 OS=Mycoplasma...    30   8.6  

>sp|P47548|Y306_MYCGE Uncharacterized protein MG306 OS=Mycoplasma
           genitalium GN=MG306 PE=4 SV=1
          Length = 393

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 IKGF*LSILWNPCR*RYFSHKFSRWAMFWRWI 420
           I GF +S+LWN     + S +F  +A +W W+
Sbjct: 63  ILGFLVSVLWNVIINWWVSRRFCFYASWWEWL 94
tr_hit_id A9U0L8
Definition tr|A9U0L8|A9U0L8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 96
Score (bit) 132.0
E-value 7.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918056|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B03.
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U0L8|A9U0L8_PHYPA Predicted protein OS=Physcomitrella paten...   132   7e-30
tr|Q5ZEI0|Q5ZEI0_ORYSJ cDNA clone:J023009J05, full insert sequen...   122   1e-26
tr|B8A038|B8A038_MAIZE Putative uncharacterized protein OS=Zea m...   121   2e-26
tr|B6U1W7|B6U1W7_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1             121   2e-26
tr|A2ZPB5|A2ZPB5_ORYSJ Putative uncharacterized protein OS=Oryza...   121   2e-26
tr|A2WKR0|A2WKR0_ORYSI Putative uncharacterized protein OS=Oryza...   121   2e-26
tr|B6SV12|B6SV12_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1             108   1e-22
tr|Q943K6|Q943K6_ORYSJ cDNA clone:J023034F22, full insert sequen...   107   3e-22
tr|A2WWU6|A2WWU6_ORYSI Putative uncharacterized protein OS=Oryza...   107   3e-22
tr|Q10NA2|Q10NA2_ORYSJ SLT1 protein, putative, expressed (Putati...   107   3e-22
tr|Q0DT06|Q0DT06_ORYSJ Os03g0277100 protein (Fragment) OS=Oryza ...   107   3e-22
tr|A7PNK9|A7PNK9_VITVI Chromosome chr8 scaffold_23, whole genome...   107   3e-22
tr|A2XF46|A2XF46_ORYSI Putative uncharacterized protein OS=Oryza...   107   3e-22
tr|Q9LHA9|Q9LHA9_ARATH Genomic DNA, chromosome 3, BAC clone: T16...   107   4e-22
tr|A7NZ35|A7NZ35_VITVI Chromosome chr6 scaffold_3, whole genome ...   105   1e-21
tr|B8A2M5|B8A2M5_MAIZE Putative uncharacterized protein OS=Zea m...   104   3e-21
tr|B8A1F4|B8A1F4_MAIZE Putative uncharacterized protein OS=Zea m...   104   3e-21
tr|B6SW94|B6SW94_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1             104   3e-21
tr|B6SV01|B6SV01_MAIZE Putative uncharacterized protein OS=Zea m...   104   3e-21
tr|A7PIX0|A7PIX0_VITVI Chromosome chr13 scaffold_17, whole genom...   102   1e-20
tr|A5AGE0|A5AGE0_VITVI Putative uncharacterized protein OS=Vitis...   102   1e-20
tr|Q3EBL0|Q3EBL0_ARATH Uncharacterized protein At2g37570.2 OS=Ar...   102   1e-20
tr|O80926|O80926_ARATH Expressed protein (Putative uncharacteriz...   102   1e-20
tr|Q9FQY3|Q9FQY3_TOBAC SLT1 protein OS=Nicotiana tabacum PE=2 SV=1     95   2e-18
tr|Q9LZ54|Q9LZ54_ARATH Putative uncharacterized protein T22P11_7...    89   9e-17
tr|Q9C5N0|Q9C5N0_ARATH Putative uncharacterized protein At5g0248...    89   9e-17
tr|A5FTJ0|A5FTJ0_ACICJ 2-nitropropane dioxygenase, NPD OS=Acidip...    34   3.5  
tr|A2DGC3|A2DGC3_TRIVA Transmembrane amino acid transporter prot...    34   3.6  

>tr|A9U0L8|A9U0L8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_200096 PE=4 SV=1
          Length = 489

 Score =  132 bits (333), Expect = 7e-30
 Identities = 62/96 (64%), Positives = 74/96 (77%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THGV+KI CTSTART  + RGDRTF+LTDP+PEHC PG+F+REI LATRIPENA+L+AFY
Sbjct: 391 THGVLKIHCTSTARTPTVVRGDRTFKLTDPNPEHCGPGDFVREIGLATRIPENADLKAFY 450

Query: 324 MEAGAGLEVFIPKHXXXXXXXXXXVFLPPQYGHKDS 217
            EA AGLE+ +PKH          VFLPPQ  H ++
Sbjct: 451 AEACAGLEIMVPKHNILSEEREVRVFLPPQMSHTEA 486


>tr|Q5ZEI0|Q5ZEI0_ORYSJ cDNA clone:J023009J05, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0009G03.17 PE=2 SV=1
          Length = 547

 Score =  122 bits (305), Expect = 1e-26
 Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STAR  ++KR DRTF+LTDP PEHCPPGEF+REI LATRIPE+A+LEA+Y
Sbjct: 448 THGIVKISCVSTARMPFVKRHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKLEAYY 507

Query: 324 MEAGAGLEVFIPKHXXXXXXXXXXVFL-PPQYGHKD 220
            E G GLE+ +PKH          V + PP  G  D
Sbjct: 508 DETGTGLEIMVPKHRVGPEEHEVQVCMRPPHLGEND 543


>tr|B8A038|B8A038_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 537

 Score =  121 bits (303), Expect = 2e-26
 Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STAR  YIK+ DRTF+LTDP PEHCPPGEF+REI LATRIPE+A++EA+Y
Sbjct: 438 THGIVKITCVSTARMPYIKKHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKIEAYY 497

Query: 324 MEAGAGLEVFIPKHXXXXXXXXXXVFL-PPQYGHKD 220
            E G GLE+ +PKH          V + PP  G  D
Sbjct: 498 DETGTGLEIMVPKHRVGPEEHEVQVCMRPPHLGDND 533


>tr|B6U1W7|B6U1W7_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1
          Length = 539

 Score =  121 bits (303), Expect = 2e-26
 Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STAR  YIK+ DRTF+LTDP PEHCPPGEF+REI LATRIPE+A++EA+Y
Sbjct: 440 THGIVKITCVSTARMPYIKKHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKIEAYY 499

Query: 324 MEAGAGLEVFIPKHXXXXXXXXXXVFL-PPQYGHKD 220
            E G GLE+ +PKH          V + PP  G  D
Sbjct: 500 DETGTGLEIMVPKHRVGPEEHEVQVCMRPPHLGDND 535


>tr|A2ZPB5|A2ZPB5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000387 PE=3 SV=1
          Length = 952

 Score =  121 bits (303), Expect = 2e-26
 Identities = 53/74 (71%), Positives = 63/74 (85%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STAR  ++KR DRTF+LTDP PEHCPPGEF+REI LATRIPE+A+LEA+Y
Sbjct: 448 THGIVKISCVSTARMPFVKRHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKLEAYY 507

Query: 324 MEAGAGLEVFIPKH 283
            E G GLE+ +PKH
Sbjct: 508 DETGTGLEIMVPKH 521


>tr|A2WKR0|A2WKR0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00421 PE=4 SV=1
          Length = 535

 Score =  121 bits (303), Expect = 2e-26
 Identities = 53/74 (71%), Positives = 63/74 (85%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STAR  ++KR DRTF+LTDP PEHCPPGEF+REI LATRIPE+A+LEA+Y
Sbjct: 448 THGIVKISCVSTARMPFVKRHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKLEAYY 507

Query: 324 MEAGAGLEVFIPKH 283
            E G GLE+ +PKH
Sbjct: 508 DETGTGLEIMVPKH 521


>tr|B6SV12|B6SV12_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1
          Length = 520

 Score =  108 bits (270), Expect = 1e-22
 Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STAR Q+I+R  R F L DPSPEHCPPG+F+REI LATRIPE+A+LEA +
Sbjct: 421 THGIVKIVCVSTARMQHIRRHGRMFALADPSPEHCPPGDFIREIPLATRIPEDAKLEACF 480

Query: 324 MEAGAGLEVFIPKHXXXXXXXXXXVFL-PPQYGHKD 220
            EA + LE+ +PK           V L PP YG  D
Sbjct: 481 DEAASVLEIMVPKRGNEPEEHEVRVSLRPPHYGAND 516


>tr|Q943K6|Q943K6_ORYSJ cDNA clone:J023034F22, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0031D11.42 PE=2 SV=1
          Length = 521

 Score =  107 bits (268), Expect = 3e-22
 Identities = 49/73 (67%), Positives = 60/73 (82%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STA+T YI+R DR F+L DP PEHCP GEF+REI LATRIPE+A+LEA++
Sbjct: 422 THGIVKILCVSTAQTPYIRRHDRVFKLADPMPEHCPHGEFVREIPLATRIPEDAKLEAYF 481

Query: 324 MEAGAGLEVFIPK 286
            EA A LE+ +PK
Sbjct: 482 DEAAAVLEIMVPK 494


>tr|A2WWU6|A2WWU6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04376 PE=4 SV=1
          Length = 521

 Score =  107 bits (268), Expect = 3e-22
 Identities = 49/73 (67%), Positives = 60/73 (82%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           THG+VKI C STA+T YI+R DR F+L DP PEHCP GEF+REI LATRIPE+A+LEA++
Sbjct: 422 THGIVKILCVSTAQTPYIRRHDRVFKLADPMPEHCPHGEFVREIPLATRIPEDAKLEAYF 481

Query: 324 MEAGAGLEVFIPK 286
            EA A LE+ +PK
Sbjct: 482 DEAAAVLEIMVPK 494


>tr|Q10NA2|Q10NA2_ORYSJ SLT1 protein, putative, expressed (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g16910 PE=4 SV=1
          Length = 539

 Score =  107 bits (267), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = -2

Query: 504 THGVVKIQCTSTARTQYIKRGDRTFELTDPSPEHCPPGEFMREIALATRIPENAELEAFY 325
           T+G+VK+ CTS  R  ++KR DRTF+L DP+PEHCPPGEF+REI L TRIPE+A LEA+ 
Sbjct: 444 TNGIVKVSCTSVGRMPFLKRHDRTFKLVDPTPEHCPPGEFIREIPLPTRIPEDATLEAYC 503

Query: 324 MEAGAGLEVFIPKH 283
            E+G GLE+ +PK+
Sbjct: 504 DESGTGLEIIVPKY 517