BP918062
Clone id YMU001_000109_B10
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGATATCTTAATATTAACGTGTTTATAAATATGTACAAATGCCAGAAAACAAACTATCA
AATGTACAGTTTGGCATCCTCTTCTCCTGCTTAGGTTAGGCCTCAATACATGTAATTATA
GGAAAAAGCTAAAGCATGATATAGCAGGGAAATGCTTCCCACATGCCTGCAAGGCACAGG
CTGGGGGGAATGCATTGTGTGCTGCAAACTGCACCAATACTTATTATGGGGCAAGGCATT
GTGTCATGCGAACTGCAACAATGGCTCCATCTTCCCCTGCTCTCATGGTGTAGAGTTTTA
CCACCAGACCTGATATGACATGGAGTACTTCATGTTACTGCATAGCTTTACATATAACTT
CCCATTAGCAGCTGCTAGTTAGAGCAAGGGAAACTCGACAGGCACCTTTAGCTTCATCAT
CGCTTTGGTCTAGATTTGTACTTGCTCCAGCAGCAAACAATGTGCTCATGGTTGCTGGCA
CACAAACGTAGGGAGGATAAACCCAGGCCTCTAAATCCAACAATTCTGT
■■Homology search results ■■ -
sp_hit_id Q700K0
Definition sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus
Align length 46
Score (bit) 30.4
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918062|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B10.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2... 30 5.4
sp|Q9Z6Y2|PRIA_CHLPN Primosomal protein N' OS=Chlamydia pneumoni... 30 5.5
sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guani... 30 9.2

>sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2
SV=1
Length = 5141

Score = 30.4 bits (67), Expect = 5.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3

Query: 111 CNYRKKLKHDIAGKCFPHA-CKAQAGGNALCAANCTNTYYGARHCV 245
CN L D+ G+C P + C Q GG+ A N T T HC+
Sbjct: 863 CNCPPGLLWDLEGQCVPPSMCPCQLGGHRY-AFNTTTTLKDCSHCI 907


>sp|Q9Z6Y2|PRIA_CHLPN Primosomal protein N' OS=Chlamydia pneumoniae
GN=priA PE=3 SV=1
Length = 749

Score = 30.4 bits (67), Expect = 5.5
Identities = 25/87 (28%), Positives = 35/87 (40%)
Frame = -1

Query: 526 ELLDLEAWVYPPYVCVPATMSTLFAAGASTNLDQSDDEAKGACRVSLALTSSC*WEVICK 347
+LLDL W+ Y LF S+N+ Q + + S A T E++ K
Sbjct: 83 DLLDLLFWISQYYFAPLGKTLKLFLPAISSNVIQPKQHYRVVLKQSKAKTK----EILAK 138

Query: 346 AMQ*HEVLHVISGLVVKLYTMRAGEDG 266
EVLH G V+K+ A G
Sbjct: 139 L----EVLHPSQGAVLKILLQHASPPG 161


>sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guanine
nucleotide exchange factor 1 OS=Cricetulus griseus
GN=GBF1 PE=2 SV=1
Length = 1856

Score = 29.6 bits (65), Expect = 9.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3

Query: 317 HIRSGGKTLHHESRGRWSHCCSSHDTMPCPIISIGAVC 204
H+ SGG+ + +SR W+HC CP++ G C
Sbjct: 1522 HLESGGRKIEADSRTLWAHCW-------CPLLQ-GIAC 1551


tr_hit_id A8PM30
Definition tr|A8PM30|A8PM30_BRUMA Trypsin Inhibitor like cysteine rich domain containing protein OS=Brugia malayi
Align length 78
Score (bit) 35.8
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918062|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B10.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8PM30|A8PM30_BRUMA Trypsin Inhibitor like cysteine rich doma... 36 1.4
tr|A0DMU8|A0DMU8_PARTE Chromosome undetermined scaffold_57, whol... 35 3.0
tr|Q9M365|Q9M365_ARATH Putative uncharacterized protein F15G16.1... 35 3.1
tr|Q9FGB8|Q9FGB8_ARATH Emb|CAB71103.1 OS=Arabidopsis thaliana PE... 35 3.1
tr|A9TZH4|A9TZH4_PHYPA Predicted protein (Fragment) OS=Physcomit... 34 5.3
tr|A8I8G6|A8I8G6_AZOC5 ABC transporter permease protein OS=Azorh... 33 6.9
tr|B4GVZ8|B4GVZ8_DROPE GL14569 OS=Drosophila persimilis GN=GL145... 33 8.8

>tr|A8PM30|A8PM30_BRUMA Trypsin Inhibitor like cysteine rich domain
containing protein OS=Brugia malayi GN=Bm1_29730 PE=4
SV=1
Length = 662

Score = 35.8 bits (81), Expect = 1.4
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = -3

Query: 407 RCLSSFPCSN*QLLMGSYM*SYAVT*STPCHIRSGGKTLHHESRGRWSHCCSSHDTMPCP 228
+C++ C N +L +Y + CH + + + + R +W+HC SS T C
Sbjct: 507 QCVAGCFCRNPYILQDAYNLNSPCILPHQCHSLTXQQQICSDPRKQWTHCFSSQCTRSCS 566

Query: 227 IISIGAVCSTQCIPPSLC 174
+ S++C P +C
Sbjct: 567 NLETSCK-SSECTPGCIC 583


>tr|A0DMU8|A0DMU8_PARTE Chromosome undetermined scaffold_57, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00018569001 PE=4 SV=1
Length = 3870

Score = 34.7 bits (78), Expect = 3.0
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 19/93 (20%)
Frame = +3

Query: 57 IKCTVWHPXXXXXXXXNTCNYRKKLKHDIA----GKC--FPHACKAQAGGNALCAANCTN 218
+ C W+P N C Y+ H ++ KC + CKA A GN CTN
Sbjct: 2263 VNCEQWNPLCTVNGTNNGCTYKTCFNHGMSSTTTAKCGQWLTICKANASGNGCELKTCTN 2322

Query: 219 -------------TYYGARHCVMRTATMAPSSP 278
Y+ C T T A P
Sbjct: 2323 YGSAITNSFSAYCPYWIGNQCTYNTVTNAACVP 2355


>tr|Q9M365|Q9M365_ARATH Putative uncharacterized protein F15G16.120
OS=Arabidopsis thaliana GN=F15G16.120 PE=4 SV=1
Length = 354

Score = 34.7 bits (78), Expect = 3.1
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1

Query: 334 HEVLHVISGLVVKLYTMRAGEDGAIVAVRMTQCL 233
H L G++VK +TM+AG DG IV++R++Q L
Sbjct: 320 HTRLQENEGILVKYHTMKAGTDGDIVSIRISQQL 353


>tr|Q9FGB8|Q9FGB8_ARATH Emb|CAB71103.1 OS=Arabidopsis thaliana PE=4
SV=1
Length = 350

Score = 34.7 bits (78), Expect = 3.1
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1

Query: 334 HEVLHVISGLVVKLYTMRAGEDGAIVAVRMTQCL 233
H L G++VK +TM+AG DG IV++R++Q L
Sbjct: 316 HTRLQQNEGILVKYHTMKAGTDGDIVSIRISQQL 349


>tr|A9TZH4|A9TZH4_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_153090 PE=4 SV=1
Length = 269

Score = 33.9 bits (76), Expect = 5.3
Identities = 26/98 (26%), Positives = 38/98 (38%)
Frame = -1

Query: 523 LLDLEAWVYPPYVCVPATMSTLFAAGASTNLDQSDDEAKGACRVSLALTSSC*WEVICKA 344
LL+L +W PP P +++ A A TNL +
Sbjct: 208 LLNLSSWNAPPGQWQPKGITSSHGAAACTNLQPNQ------------------------- 242

Query: 343 MQ*HEVLHVISGLVVKLYTMRAGEDGAIVAVRMTQCLA 230
GL VK +TM+AG +G +V +R+ Q LA
Sbjct: 243 -----------GLKVKFHTMKAGTEGPVVGIRICQQLA 269


>tr|A8I8G6|A8I8G6_AZOC5 ABC transporter permease protein
OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=AZC_2660 PE=3 SV=1
Length = 337

Score = 33.5 bits (75), Expect = 6.9
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1

Query: 412 LHHRFGLDLYLLQQQTMCSWLLAHKRREDKPR 507
L +RFGLDL +LQQ W LAH D PR
Sbjct: 68 LRNRFGLDLPVLQQLADYLWTLAHFSLGDSPR 99


>tr|B4GVZ8|B4GVZ8_DROPE GL14569 OS=Drosophila persimilis GN=GL14569
PE=4 SV=1
Length = 256

Score = 33.1 bits (74), Expect = 8.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3

Query: 278 RGRWSHCCSSHDTMPCPIISIGAVCSTQCIPPSLCLAGMWEAFPCYI 138
R RW C S HD P P+ +V + + S CLA +W P Y+
Sbjct: 170 RQRWRPCWSLHDAFPMPLFESSSVSVSVFVSMSWCLA-VW-CVPAYV 214