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NBDC - LSDB Archive
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BP918064
Clone id YMU001_000109_B12
Library
Length 151
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCAAGCAACGGAAGGACCGAGGCCACTGTAAAATGACAAGAAGCCTTCTTCCCTTACCAT
ATTGGTTGCTACTTGAATCATAGATTTGGAAGCGGGATCTACAGGCAAGCGCAAACGAAA
CACATCAAGCGGATATGTAACCAACGTTGAG
■■Homology search results ■■ -
sp_hit_id Q9M024
Definition sp|Q9M024|TAAC_ARATH Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana
Align length 48
Score (bit) 70.9
E-value 2.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918064|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B12.
         (151 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M024|TAAC_ARATH Thylakoid ADP,ATP carrier protein, chloropl...    71   2e-12
sp|O65023|EAAC_ARATH Probable envelope ADP,ATP carrier protein, ...    66   6e-11
sp|Q05AQ3|S2542_XENTR Solute carrier family 25 member 42 OS=Xeno...    44   3e-04
sp|A4RF23|TPC1_MAGGR Mitochondrial thiamine pyrophosphate carrie...    40   0.003
sp|Q5PQ27|S2542_XENLA Solute carrier family 25 member 42 OS=Xeno...    40   0.003
sp|A3LVX1|TPC1_PICST Mitochondrial thiamine pyrophosphate carrie...    40   0.004
sp|A2A3V2|S2543_MOUSE Solute carrier family 25 member 43 OS=Mus ...    40   0.004
sp|A5DIS9|TPC1_PICGU Mitochondrial thiamine pyrophosphate carrie...    40   0.005
sp|O60029|PET8_ASHGO Putative mitochondrial carrier protein PET8...    39   0.008
sp|Q1LZB3|S2533_BOVIN Solute carrier family 25 member 33 OS=Bos ...    39   0.011
sp|P38921|PET8_YEAST Putative mitochondrial carrier protein PET8...    39   0.011
sp|Q7S2H8|TPC1_NEUCR Mitochondrial thiamine pyrophosphate carrie...    38   0.014
sp|Q8WUT9|S2543_HUMAN Solute carrier family 25 member 43 OS=Homo...    38   0.018
sp|Q0P483|S2542_DANRE Solute carrier family 25 member 42 OS=Dani...    38   0.018
sp|Q9BSK2|S2533_HUMAN Solute carrier family 25 member 33 OS=Homo...    38   0.018
sp|Q3TZX3|S2533_MOUSE Solute carrier family 25 member 33 OS=Mus ...    37   0.031
sp|Q10442|YDE9_SCHPO Uncharacterized mitochondrial carrier C12B1...    36   0.069
sp|Q5NVC1|TPC_PONAB Mitochondrial thiamine pyrophosphate carrier...    36   0.069
sp|Q5IS35|TPC_MACFA Mitochondrial thiamine pyrophosphate carrier...    36   0.069
sp|Q9HC21|TPC_HUMAN Mitochondrial thiamine pyrophosphate carrier...    36   0.069
sp|P0C546|S2542_RAT Solute carrier family 25 member 42 OS=Rattus...    35   0.12 
sp|Q8R0Y8|S2542_MOUSE Solute carrier family 25 member 42 OS=Mus ...    35   0.12 
sp|Q86VD7|S2542_HUMAN Solute carrier family 25 member 42 OS=Homo...    35   0.12 
sp|O43808|PM34_HUMAN Peroxisomal membrane protein PMP34 OS=Homo ...    35   0.12 
sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus m...    35   0.15 
sp|P53257|TPC1_YEAST Mitochondrial thiamine pyrophosphate carrie...    34   0.20 
sp|Q29RM1|TPC_BOVIN Mitochondrial thiamine pyrophosphate carrier...    34   0.26 
sp|Q59Q36|TPC1_CANAL Mitochondrial thiamine pyrophosphate carrie...    34   0.26 
sp|P38127|RIM2_YEAST Mitochondrial carrier protein RIM2 OS=Sacch...    34   0.26 
sp|P16261|GDC_RAT Graves disease carrier protein (Fragment) OS=R...    34   0.26 

>sp|Q9M024|TAAC_ARATH Thylakoid ADP,ATP carrier protein,
           chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1
          Length = 415

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STL+TYPLDV RLRL V+P  ++M QVA NM+REEG  SFY+GLGPS+
Sbjct: 229 STLITYPLDVLRLRLAVEPGYRTMSQVALNMLREEGVASFYNGLGPSL 276


>sp|O65023|EAAC_ARATH Probable envelope ADP,ATP carrier protein,
           chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1
          Length = 381

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STL+TYPLDV RLRL V+P  ++M QVA +M+R+EG  SFY GLGPS+
Sbjct: 201 STLLTYPLDVLRLRLAVEPRYRTMSQVALSMLRDEGIASFYYGLGPSL 248


>sp|Q05AQ3|S2542_XENTR Solute carrier family 25 member 42 OS=Xenopus
           tropicalis GN=slc25a42 PE=2 SV=1
          Length = 327

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPAS--KSMIQVATNMVREEGFLSFYSGLGPSV 7
           +T++TYPLD+ R R+ V P     ++I V   M REEG  S Y G  P+V
Sbjct: 148 ATIITYPLDLVRARMAVTPKEMYSNIIHVFMRMSREEGLKSLYRGFTPTV 197


>sp|A4RF23|TPC1_MAGGR Mitochondrial thiamine pyrophosphate carrier 1
           OS=Magnaporthe grisea GN=TPC1 PE=3 SV=2
          Length = 327

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPV-----DPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           ST VTYPLD+ R R        D   +S+ +   ++ R+EG+  F+ G+GP+V
Sbjct: 142 STTVTYPLDLLRTRFAAQGSGDDRVYQSLRRAVADIWRDEGYRGFFRGIGPAV 194


>sp|Q5PQ27|S2542_XENLA Solute carrier family 25 member 42 OS=Xenopus
           laevis GN=slc25a42 PE=2 SV=1
          Length = 327

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPAS--KSMIQVATNMVREEGFLSFYSGLGPSV 7
           +TL+TYPLD+ R R+ V       ++I V   M REEG  S Y G  P+V
Sbjct: 148 ATLLTYPLDLVRARMAVTQKEMYSNIIHVFMRMSREEGLKSLYRGFTPTV 197


>sp|A3LVX1|TPC1_PICST Mitochondrial thiamine pyrophosphate carrier 1
           OS=Pichia stipitis GN=TPC1 PE=3 SV=2
          Length = 305

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASK--SMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYP D+ R RL  +   K  SM   A  ++  EGF   ++G+ P++
Sbjct: 132 STLVTYPFDLLRTRLAANSEKKLLSMSGTAREIISSEGFTGLFAGIKPAM 181


>sp|A2A3V2|S2543_MOUSE Solute carrier family 25 member 43 OS=Mus
           musculus GN=Slc25a43 PE=2 SV=1
          Length = 341

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPV----DPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           ST+VTYP D+ + RL V    +P+ + +I   + + ++EGFL+ Y G+  +V
Sbjct: 120 STIVTYPTDLIKTRLMVQNVLEPSYRGLIHAFSTIYQQEGFLALYRGVSLTV 171


>sp|A5DIS9|TPC1_PICGU Mitochondrial thiamine pyrophosphate carrier 1
           OS=Pichia guilliermondii GN=TPC1 PE=3 SV=3
          Length = 291

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -2

Query: 141 VTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           +T+PLD  R R+ +  +  S+I +A  ++R EG   FY G G S+
Sbjct: 226 ITFPLDTLRKRMQMRSSKTSIIGLARTILRREGLFGFYKGFGISL 270


>sp|O60029|PET8_ASHGO Putative mitochondrial carrier protein PET8
           OS=Ashbya gossypii GN=PET8 PE=3 SV=1
          Length = 271

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -2

Query: 138 TYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSVAW 1
           T PLDV + R+ +      M+ +A  + REEG   F+ G+GP   W
Sbjct: 207 TTPLDVLKTRMMLHERRVPMLHLARTLFREEGARVFFRGIGPRTMW 252


>sp|Q1LZB3|S2533_BOVIN Solute carrier family 25 member 33 OS=Bos
           taurus GN=SLC25A33 PE=2 SV=1
          Length = 321

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPAS-KSMIQVATNMVREEGFLSFYSGL 19
           ++ V YP +V R RL  + +  KS +Q A  + REEG+L+FY GL
Sbjct: 247 ASCVAYPHEVIRTRLREEGSKYKSFVQTARLVFREEGYLAFYRGL 291
tr_hit_id B8LMT2
Definition tr|B8LMT2|B8LMT2_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 48
Score (bit) 75.9
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918064|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_B12.
         (151 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LMT2|B8LMT2_PICSI Putative uncharacterized protein OS=Picea...    76   1e-12
tr|A9S6L8|A9S6L8_PHYPA Predicted protein OS=Physcomitrella paten...    70   7e-11
tr|A9SLP1|A9SLP1_PHYPA Predicted protein OS=Physcomitrella paten...    68   2e-10
tr|A7PP43|A7PP43_VITVI Chromosome chr8 scaffold_23, whole genome...    67   6e-10
tr|Q9LD54|Q9LD54_ORYSJ cDNA clone:J023053G08, full insert sequen...    66   1e-09
tr|B8AC70|B8AC70_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|B6TN88|B6TN88_MAIZE Protein brittle-1 OS=Zea mays PE=2 SV=1         66   1e-09
tr|A2ZRJ7|A2ZRJ7_ORYSJ Putative uncharacterized protein OS=Oryza...    61   3e-08
tr|A4S8E6|A4S8E6_OSTLU MC family transporter OS=Ostreococcus luc...    51   3e-05
tr|B2B0E9|B2B0E9_PODAN Predicted CDS Pa_3_5440 OS=Podospora anse...    47   4e-04
tr|A4RDA1|A4RDA1_MAGGR Putative uncharacterized protein OS=Magna...    46   8e-04
tr|B3RMX8|B3RMX8_TRIAD Putative uncharacterized protein OS=Trich...    45   0.001
tr|A9SRD8|A9SRD8_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.002
tr|A3M0K7|A3M0K7_PICST Mitochondrial carrier protein PET8 OS=Pic...    43   0.009
tr|A8HW48|A8HW48_CHLRE Mitochondrial substrate carrier protein O...    42   0.012
tr|A4S1L1|A4S1L1_OSTLU MC family transporter: Grave's disease ca...    42   0.012
tr|B4M6C1|B4M6C1_DROVI GJ10419 OS=Drosophila virilis GN=GJ10419 ...    42   0.012
tr|B3MSA5|B3MSA5_DROAN GF20835 OS=Drosophila ananassae GN=GF2083...    42   0.012
tr|Q6CS09|Q6CS09_KLULA KLLA0D04950p OS=Kluyveromyces lactis GN=K...    42   0.012
tr|Q9W2T2|Q9W2T2_DROME LD16544p OS=Drosophila melanogaster GN=CG...    42   0.015
tr|Q7KVQ8|Q7KVQ8_DROME CG1628 OS=Drosophila melanogaster GN=CG16...    42   0.015
tr|B4R7L2|B4R7L2_DROSI GD16025 OS=Drosophila simulans GN=GD16025...    42   0.015
tr|B4PXY0|B4PXY0_DROYA GE15385 OS=Drosophila yakuba GN=GE15385 P...    42   0.015
tr|B4MT67|B4MT67_DROWI GK19764 OS=Drosophila willistoni GN=GK197...    42   0.015
tr|B4IDS2|B4IDS2_DROSE GM11300 OS=Drosophila sechellia GN=GM1130...    42   0.015
tr|B3NW16|B3NW16_DROER GG18911 OS=Drosophila erecta GN=GG18911 P...    42   0.015
tr|Q29A20|Q29A20_DROPS GA21325 OS=Drosophila pseudoobscura pseud...    42   0.020
tr|B4NKC6|B4NKC6_DROWI GK13938 OS=Drosophila willistoni GN=GK139...    42   0.020
tr|B4JKN9|B4JKN9_DROGR GH12025 OS=Drosophila grimshawi GN=GH1202...    42   0.020
tr|B4G3M1|B4G3M1_DROPE GL24469 OS=Drosophila persimilis GN=GL244...    42   0.020

>tr|B8LMT2|B8LMT2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 404

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 40/48 (83%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYPLDV RLRL VDPA K+M QVA NM+REEG  SFY GLGPS+
Sbjct: 223 STLVTYPLDVLRLRLAVDPACKTMSQVAINMMREEGLASFYKGLGPSL 270


>tr|A9S6L8|A9S6L8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124901 PE=3 SV=1
          Length = 327

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 34/48 (70%), Positives = 38/48 (79%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYPLDV RLRL VDP ++SM QV   M+REEG  SFY GLGPS+
Sbjct: 147 STLVTYPLDVLRLRLAVDPTTRSMGQVVGTMLREEGLKSFYKGLGPSL 194


>tr|A9SLP1|A9SLP1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_131856 PE=3 SV=1
          Length = 346

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 34/48 (70%), Positives = 38/48 (79%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYPLDV RLRL VD  ++SM QVA  M+REEG  SFY GLGPS+
Sbjct: 166 STLVTYPLDVLRLRLAVDSTTRSMGQVAGTMLREEGLKSFYKGLGPSL 213


>tr|A7PP43|A7PP43_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021503001
           PE=3 SV=1
          Length = 381

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           ST VTYPLDV RLRL V+P  ++M +VA N++REEG  SFY GLGPS+
Sbjct: 198 STFVTYPLDVLRLRLAVEPGHQTMSEVALNILREEGVASFYKGLGPSL 245


>tr|Q9LD54|Q9LD54_ORYSJ cDNA clone:J023053G08, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0453A06.32 PE=2 SV=1
          Length = 381

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYPLDV RLRL V     +M QVA NM+R+EG  SFY GLGPS+
Sbjct: 203 STLVTYPLDVLRLRLAVQSGHSTMSQVAMNMLRDEGLASFYGGLGPSL 250


>tr|B8AC70|B8AC70_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01295 PE=4 SV=1
          Length = 328

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYPLDV RLRL V     +M QVA NM+R+EG  SFY GLGPS+
Sbjct: 150 STLVTYPLDVLRLRLAVQSGHSTMSQVAMNMLRDEGLASFYGGLGPSL 197


>tr|B6TN88|B6TN88_MAIZE Protein brittle-1 OS=Zea mays PE=2 SV=1
          Length = 396

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           STLVTYPLDV RLRL V     ++ QVA NM+REEG  SFY GLGPS+
Sbjct: 218 STLVTYPLDVLRLRLAVQSGHSTLSQVALNMLREEGLASFYGGLGPSL 265


>tr|A2ZRJ7|A2ZRJ7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001169 PE=3 SV=1
          Length = 252

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = -2

Query: 141 VTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSV 7
           VTYPLDV RLRL V     +M QVA NM+R+EG  SFY GLGPS+
Sbjct: 77  VTYPLDVLRLRLAVQSGHSTMSQVAMNMLRDEGLASFYGGLGPSL 121


>tr|A4S8E6|A4S8E6_OSTLU MC family transporter OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_40647 PE=3 SV=1
          Length = 322

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -2

Query: 150 STLVTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGL 19
           +T+VTYPLD+ RLRL VD ++KSM  VA  ++  EG L F+ GL
Sbjct: 141 ATIVTYPLDIIRLRLSVDTSAKSMGDVARTILANEGPLGFFKGL 184


>tr|B2B0E9|B2B0E9_PODAN Predicted CDS Pa_3_5440 OS=Podospora
           anserina PE=4 SV=1
          Length = 295

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = -2

Query: 141 VTYPLDVFRLRLPVDPASKSMIQVATNMVREEGFLSFYSGLGPSVAW 1
           VT PLDV + R+ +    +SM +V T+++RE G   F++G+GP V W
Sbjct: 216 VTTPLDVLKTRVMLSTEKQSMFKVMTDILRENGIRPFFAGIGPRVMW 262