BP918066
Clone id YMU001_000109_C02
Library
Length 221
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTAAGTACACTCTCTGTTGGTCCTGACAGATTCCAACAGCGTATTCTGATCGAGGGATC
CAATGGCAAGCAGGCTATTTTCTCATGGTCTTTGTCAAGACAAGACACAGAACCATTTCA
AGACTGCTGGATGACAGATTCTGTCCATCGTGATCCGTGATATGGGAAACCAATGAACAT
GCACGTTCGTACGAAGGCACCAACATGATTGCCACCTTCAT
■■Homology search results ■■ -
sp_hit_id Q6VNB8
Definition sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus
Align length 42
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918066|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_C02.
(221 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing prote... 30 3.7
sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing prote... 30 4.8

>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3
OS=Mus musculus GN=Wdfy3 PE=2 SV=1
Length = 3508

Score = 30.0 bits (66), Expect = 3.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2

Query: 14 SVGPDRFQQRILIEGSNGKQAIFSWSLSRQDTEPFQDCWMTD 139
++G + RIL+ S G+ +FSWS+S Q D W+ D
Sbjct: 3397 ALGVSKDHSRILVGDSRGR--VFSWSVSDQPGRSAADHWVKD 3436


>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3
OS=Homo sapiens GN=WDFY3 PE=1 SV=2
Length = 3526

Score = 29.6 bits (65), Expect = 4.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2

Query: 14 SVGPDRFQQRILIEGSNGKQAIFSWSLSRQDTEPFQDCWMTD 139
++G + RIL+ S G+ +FSWS+S Q D W+ D
Sbjct: 3415 ALGISKDHSRILVGDSRGR--VFSWSVSDQPGRSAADHWVKD 3454


tr_hit_id Q5V6H8
Definition tr|Q5V6H8|Q5V6H8_HALMA Putative uncharacterized protein OS=Haloarcula marismortui
Align length 37
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918066|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_C02.
(221 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5V6H8|Q5V6H8_HALMA Putative uncharacterized protein OS=Haloa... 35 1.9
tr|Q2S4B5|Q2S4B5_SALRD Putative uncharacterized protein OS=Salin... 35 2.5
tr|Q18HT6|Q18HT6_HALWD Putative uncharacterized protein OS=Haloq... 33 7.2

>tr|Q5V6H8|Q5V6H8_HALMA Putative uncharacterized protein
OS=Haloarcula marismortui GN=pNG7168 PE=4 SV=1
Length = 134

Score = 35.0 bits (79), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2

Query: 35 QQRILIEGSNGKQAIFSWSLSRQDTEPFQDCWMTDSV 145
+QR+ + G +G+ + + LS Q F+ CW TD V
Sbjct: 95 EQRVTVTGPDGRTTTYEFGLSVQSVGEFRGCWQTDRV 131


>tr|Q2S4B5|Q2S4B5_SALRD Putative uncharacterized protein
OS=Salinibacter ruber (strain DSM 13855) GN=SRU_0831
PE=4 SV=1
Length = 213

Score = 34.7 bits (78), Expect = 2.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2

Query: 44 ILIEGSNGKQAIFSWSLSRQDTEPFQDCWMTDSVHRDP 157
+++ + G + + + LS+QD DCWMTD+V R P
Sbjct: 167 VILTTAQGDRVGYLFRLSKQDGGAHTDCWMTDAVQRVP 204


>tr|Q18HT6|Q18HT6_HALWD Putative uncharacterized protein
OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ2328A
PE=4 SV=1
Length = 141

Score = 33.1 bits (74), Expect = 7.2
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Frame = +2

Query: 26 DRFQQRILIEGSNGKQAIFSWSLSR------QDTEPFQDCWMTDSVHRD 154
D QQR+ + G +G+ + + +S+ +T P +CW+TD V R+
Sbjct: 93 DSAQQRVTLTGEDGQTVTYRFGVSKYESTPEDETIPEPNCWLTDRVLRE 141