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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918067
Clone id YMU001_000109_C03
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCTTCAGCCAATGTTGCATTCCAACAGGTACTCACCTCATCTTGGACTCAAAGCAACAAG
ATATACCGTCGCTATTTGGTAAAAGTAACCAACGTCTCGCGGGGCAAGCTGTCTAACATA
AAACTGGTCAGTCGAGACCTTACAGTGGGCGGTCTACGGCATTTACAAGCTCTCAGCTTC
CTCTAACCTTTACACATTTCCTCAGTCTCTCGCCCCTCGTCAATCCGCGATGTTTGTCTA
CATCCAACCAGGCCCTCAGGCCACCTTCACTCTTGCAAGCTTCACTCCAACATTTTGAGG
CTTTTCTCTAAATTGGCTTACCGTCTAACCTCAACCCTCCTTGCACAAAGTGTTGAGGAG
CATTGTTATAGATAACATGCCCCAAGTATTGCTCATTTTTAGCAAAACAAGAGAGGCTGG
AAAAACTCACCTGTAAGCATAACCCCATTCTTTCATCACCATTGAACTGCAATTCCCACC
CTACTATGGACCTCTTGGTGTGCATA
■■Homology search results ■■ -
sp_hit_id Q6L4I2
Definition sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 34.3
E-value 0.34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918067|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_C03.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. ja...    34   0.34 
sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japo...    26   0.74 
sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana G...    32   1.7  
sp|Q01981|CREA_EMENI DNA-binding protein creA OS=Emericella nidu...    31   2.9  
sp|Q9P889|CREA_ASPOR DNA-binding protein creA OS=Aspergillus ory...    31   3.8  
sp|Q05620|CREA_ASPNG DNA-binding protein creA OS=Aspergillus nig...    30   4.9  
sp|Q7NTH5|RADC_CHRVO DNA repair protein radC homolog OS=Chromoba...    30   6.5  
sp|O94166|CREA_ASPAC DNA-binding protein creA OS=Aspergillus acu...    30   6.5  

>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp.
           japonica GN=Os05g0212300 PE=2 SV=1
          Length = 629

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 13  VAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGK 108
           +  +Q +T +W +  + Y RY V VTN SRGK
Sbjct: 535 IGIEQNVTGTWARRRRTYYRYAVTVTNRSRGK 566


>sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp.
           japonica GN=GLU7 PE=2 SV=1
          Length = 640

 Score = 26.2 bits (56), Expect(2) = 0.74
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  TSSWTQSNKIYRRYLVKVTNVS 99
           T+SW +  + YRRY   V+N S
Sbjct: 550 TASWKKDGRTYRRYAATVSNRS 571



 Score = 25.0 bits (53), Expect(2) = 0.74
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 152 VYGIYKLSASSNLYTFPQSLAPRQSAMFVYIQPGPQA 262
           V+G+ K  A+   Y  P SLA  +SA F Y+  G  A
Sbjct: 592 VWGLEK--AARYGYVLPSSLAAGESAAFAYVVRGRAA 626


>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana
           GN=At4g11050 PE=2 SV=1
          Length = 626

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +1

Query: 13  VAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDL--TVGGLRHLQALSFL* 186
           +   Q +T+SW    K+Y RY   +TN S   L  +K+    L   + G+      SF  
Sbjct: 534 ITISQKMTNSWKNEGKVYYRYSTILTNRSTKTLKILKISITKLYGPIWGVTK-TGNSFSF 592

Query: 187 PLHISSVSRPSSIRDVCLHPTRPSGHLHS 273
           P  + S+    S+  V +H   P+  L S
Sbjct: 593 PSWMQSLPSGKSMEFVYIHSASPADVLVS 621


>sp|Q01981|CREA_EMENI DNA-binding protein creA OS=Emericella
           nidulans GN=creA PE=1 SV=1
          Length = 416

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +3

Query: 117 HKTGQSRPYSGRSTA-----FTSSQLPLTFTHFLSLSPLVNPRCLSTSNQALRPPSLLQA 281
           H+  +SRP S  STA     F+   L  T  H    +P  +PR    S   L  PS+   
Sbjct: 272 HRVKRSRPNSPNSTAPSSPTFSHDSLSPTPDHTPLATPAHSPRLKPLSPSELHLPSIRHL 331

Query: 282 SLQHFEA 302
           SL H  A
Sbjct: 332 SLHHTPA 338


>sp|Q9P889|CREA_ASPOR DNA-binding protein creA OS=Aspergillus oryzae
           GN=creA PE=3 SV=1
          Length = 429

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +3

Query: 117 HKTGQSRPYSGRSTA-----FTSSQLPLTFTHFLSLSPLVNPRCLSTSNQALRPPSLLQA 281
           H+  +SRP S  STA     F+   L  T  H    +P  +PR     +  L  PS+   
Sbjct: 285 HRVKRSRPNSPNSTAPSSPTFSHDSLSPTPDHTPLATPAHSPRLRPLGSSELHLPSIRHL 344

Query: 282 SLQHFEA 302
           SL H  A
Sbjct: 345 SLHHTPA 351


>sp|Q05620|CREA_ASPNG DNA-binding protein creA OS=Aspergillus niger
           GN=creA PE=3 SV=1
          Length = 427

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +3

Query: 117 HKTGQSRPYSGRSTA-----FTSSQLPLTFTHFLSLSPLVNPRCLSTSNQALRPPSLLQA 281
           H+  +SRP S  STA     F+   L  T  H    +P  +PR     +  L  PS+   
Sbjct: 282 HRVKRSRPNSPNSTAPSSPTFSHDSLSPTPDHTPLATPAHSPRLRPLGSSDLHLPSIRHL 341

Query: 282 SLQHFEA 302
           SL H  A
Sbjct: 342 SLHHTPA 348


>sp|Q7NTH5|RADC_CHRVO DNA repair protein radC homolog
           OS=Chromobacterium violaceum GN=radC PE=3 SV=1
          Length = 224

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 76  LVKVTNVSRGKLSNIKLVSRDLTVGGLRHLQALSFL*PLHISSVSRPSS 222
           L++V  V +G L+  ++  R++    LRH  A   +   H S VS PSS
Sbjct: 136 LIEVEEVFKGTLTETRVYPREVLRRALRHNAAALIIAHNHPSGVSEPSS 184


>sp|O94166|CREA_ASPAC DNA-binding protein creA OS=Aspergillus
           aculeatus GN=creA PE=3 SV=1
          Length = 431

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
 Frame = +3

Query: 21  PTGTHLILDSKQQD---IPSL--------FGKSNQRLAGQAV*HKTGQSRPYSGRSTA-- 161
           P   HL   S+      +PSL          +S+      +  H+  +SRP S  STA  
Sbjct: 243 PRNHHLFSSSRHHGSGRLPSLSAYAITHNMSRSHSHEEDDSYSHRVKRSRPNSPNSTAPS 302

Query: 162 ---FTSSQLPLTFTHFLSLSPLVNPRCLSTSNQALRPPSLLQASLQHFEA 302
              F+   L  T  H    +P  +PR     +  L  PS+   SL H  A
Sbjct: 303 SPTFSHDLLSPTPDHTPLATPAHSPRLRPLGSSDLHLPSIRHLSLHHTPA 352
tr_hit_id Q25B24
Definition tr|Q25B24|Q25B24_PRUPE Endo-beta-1,4-glucanase OS=Prunus persica
Align length 88
Score (bit) 44.7
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918067|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_C03.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q25B24|Q25B24_PRUPE Endo-beta-1,4-glucanase OS=Prunus persica...    45   0.003
tr|Q25B23|Q25B23_PRUPE Endo-beta-1,4-glucanase OS=Prunus persica...    45   0.003
tr|Q9ZSP9|Q9ZSP9_SOLLC Endo-beta-1,4-D-glucanase OS=Solanum lyco...    44   0.006
tr|A5BTQ3|A5BTQ3_VITVI Putative uncharacterized protein OS=Vitis...    36   0.009
tr|A7QUA9|A7QUA9_VITVI Chromosome chr2 scaffold_176, whole genom...    36   0.009
tr|Q93WY9|Q93WY9_TOBAC Endo-beta-1,4-glucanase OS=Nicotiana taba...    40   0.083
tr|A9PIJ6|A9PIJ6_POPTR Putative uncharacterized protein OS=Popul...    38   0.32 
tr|Q9XGK7|Q9XGK7_FRAAN Endo-beta-1,4-glucanase OS=Fragaria anana...    37   0.41 
tr|Q8LJP6|Q8LJP6_GOSHI Endo-1,4-beta-glucanase OS=Gossypium hirs...    37   0.41 
tr|Q8L6S6|Q8L6S6_FRAAN Endo-beta-1,4-glucanase OS=Fragaria anana...    37   0.41 
tr|Q8GTP5|Q8GTP5_PYRCO Endo-1,4-beta-D-glucanase OS=Pyrus commun...    37   0.41 
tr|O65186|O65186_FRAAN Cellulase OS=Fragaria ananassa GN=Cel2 PE...    37   0.41 
tr|A2Y1K4|A2Y1K4_ORYSI Putative uncharacterized protein OS=Oryza...    35   0.44 
tr|Q1WW44|Q1WW44_COCIM Putative uncharacterized protein OS=Cocci...    36   0.92 
tr|Q0URT9|Q0URT9_PHANO Putative uncharacterized protein OS=Phaeo...    35   1.6  
tr|O23954|O23954_GOSHI Endo-1,4-beta-glucanase (Fragment) OS=Gos...    35   2.1  
tr|Q0DJY9|Q0DJY9_ORYSJ Os05g0212300 protein OS=Oryza sativa subs...    34   3.5  
tr|A3B142|A3B142_ORYSJ Putative uncharacterized protein OS=Oryza...    34   3.5  
tr|A0LE25|A0LE25_MAGSM Putative uncharacterized protein OS=Magne...    34   4.6  
tr|Q2HZY0|Q2HZY0_SOYBN Endo-1,4-beta-glucanase (Fragment) OS=Gly...    34   4.6  
tr|B1S8S2|B1S8S2_9BIFI Putative uncharacterized protein OS=Bifid...    33   6.0  
tr|A2WM54|A2WM54_ORYSI Putative uncharacterized protein OS=Oryza...    26   9.2  

>tr|Q25B24|Q25B24_PRUPE Endo-beta-1,4-glucanase OS=Prunus persica
           GN=eg4 PE=3 SV=1
          Length = 620

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   ASANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDL--TVGGLRHLQAL 174
           +S+ +A QQ LT+SW      Y RY   VTN S   L+N+KL    L   + GL      
Sbjct: 524 SSSPIAIQQKLTTSWVSKGVTYYRYSTVVTNKSAKTLTNLKLSVSKLYGPIWGLTK-AGD 582

Query: 175 SFL*PLHISSVSRPSSIRDVCLHPTRPS 258
           S++ P  I+S+S   S+  V +H   P+
Sbjct: 583 SYVFPSWINSLSAGKSLEFVYIHSASPA 610


>tr|Q25B23|Q25B23_PRUPE Endo-beta-1,4-glucanase OS=Prunus persica
           GN=eg4 PE=2 SV=1
          Length = 620

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   ASANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDL--TVGGLRHLQAL 174
           +S+ +A QQ LT+SW      Y RY   VTN S   L+N+KL    L   + GL      
Sbjct: 524 SSSPIAIQQKLTTSWVSKGVTYYRYSTVVTNKSAKTLTNLKLSVSKLYGPIWGLTK-AGD 582

Query: 175 SFL*PLHISSVSRPSSIRDVCLHPTRPS 258
           S++ P  I+S+S   S+  V +H   P+
Sbjct: 583 SYVFPSWINSLSAGKSLEFVYIHSASPA 610


>tr|Q9ZSP9|Q9ZSP9_SOLLC Endo-beta-1,4-D-glucanase OS=Solanum
           lycopersicum GN=Cel8 PE=2 SV=1
          Length = 625

 Score = 43.5 bits (101), Expect = 0.006
 Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   ASANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDLTVGGLRHLQAL-- 174
           A+A+V  QQ  TSSW  + K Y RY   VTN S   + N+KL    L  G L  L     
Sbjct: 529 ANAHVTIQQRATSSWALNGKTYYRYSAVVTNKSGKTVKNLKLSIVKL-YGPLWGLTKYGN 587

Query: 175 SFL*PLHISSVSRPSSIRDVCLHPTRPS 258
           SF+ P  ++S+    S+  V +H   P+
Sbjct: 588 SFIFPAWLNSLPAGKSLEFVYIHTASPA 615


>tr|A5BTQ3|A5BTQ3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031862 PE=4 SV=1
          Length = 629

 Score = 35.8 bits (81), Expect(2) = 0.009
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 4   SANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKL 126
           SA +A +Q LT+SW      Y RY   VTN S   L +++L
Sbjct: 534 SAEIAIEQKLTTSWKAKGNTYNRYSTIVTNKSAKTLKDLEL 574



 Score = 26.2 bits (56), Expect(2) = 0.009
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +2

Query: 152 VYG-IYKLSASSNLYTFP---QSLAPRQSAMFVYIQPGPQATFTLASFT 286
           +YG ++ L+ S + Y FP   ++LA  +   FVYI     A  +++S+T
Sbjct: 579 LYGPLWGLTKSGDSYGFPSWLKALAAGEKLEFVYIHSADPAEVSVSSYT 627


>tr|A7QUA9|A7QUA9_VITVI Chromosome chr2 scaffold_176, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00006761001
           PE=4 SV=1
          Length = 619

 Score = 35.8 bits (81), Expect(2) = 0.009
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 4   SANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKL 126
           SA +A +Q LT+SW      Y RY   VTN S   L +++L
Sbjct: 524 SAEIAIEQKLTTSWKAKGNTYNRYSTIVTNKSAKTLKDLEL 564



 Score = 26.2 bits (56), Expect(2) = 0.009
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +2

Query: 152 VYG-IYKLSASSNLYTFP---QSLAPRQSAMFVYIQPGPQATFTLASFT 286
           +YG ++ L+ S + Y FP   ++LA  +   FVYI     A  +++S+T
Sbjct: 569 LYGPLWGLTKSGDSYGFPSWLKALAAGEKLEFVYIHSADPAEVSVSSYT 617


>tr|Q93WY9|Q93WY9_TOBAC Endo-beta-1,4-glucanase OS=Nicotiana tabacum
           GN=Cel8 PE=2 SV=1
          Length = 624

 Score = 39.7 bits (91), Expect = 0.083
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   ASANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDLTVGGLRHLQAL-- 174
           ++A++  +Q  T+SW    K Y RY V VTN S   + N+KL    L  G L  L     
Sbjct: 528 STADITIEQKETASWVPKGKTYYRYSVIVTNKSAMTMKNLKLSIYQL-YGSLWGLSKYGD 586

Query: 175 SFL*PLHISSVSRPSSIRDVCLHPTRPS 258
           S++ P  ++S+    ++  V +H   P+
Sbjct: 587 SYVFPAWLNSLPAGKTLEFVYVHSASPA 614


>tr|A9PIJ6|A9PIJ6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 280

 Score = 37.7 bits (86), Expect = 0.32
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 4   SANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDL--TVGGLRHLQALS 177
           SA ++  Q +T++W    K Y RY + VTN S  +L +IKL    L   + GL      S
Sbjct: 185 SAPISIAQKMTTTWIAKGKTYYRYSITVTNKSAKELKDIKLSISKLYGPLWGLTK-SGNS 243

Query: 178 FL*PLHISSVSRPSSIRDVCLH 243
           +  P  +SS+    S+  V +H
Sbjct: 244 YAFPSWMSSLPAGKSLEFVYIH 265


>tr|Q9XGK7|Q9XGK7_FRAAN Endo-beta-1,4-glucanase OS=Fragaria ananassa
           GN=eg3 PE=2 SV=1
          Length = 620

 Score = 37.4 bits (85), Expect = 0.41
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +1

Query: 4   SANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDLTVGGLRHLQAL--S 177
           S  +A  Q +TSSW      Y RY   VTN S   L+N+KL    L  G L  L     S
Sbjct: 525 SGPIAIAQKVTSSWVSKGVTYYRYSTTVTNKSGKTLNNLKLTISKL-YGPLWGLTKTGDS 583

Query: 178 FL*PLHISSVSRPSSIRDVCLH 243
           ++ P  ++S+    S+  V +H
Sbjct: 584 YVFPSWLNSLPAGKSLEFVYIH 605


>tr|Q8LJP6|Q8LJP6_GOSHI Endo-1,4-beta-glucanase OS=Gossypium
           hirsutum GN=Cel1 PE=2 SV=2
          Length = 620

 Score = 37.4 bits (85), Expect = 0.41
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   ASANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDL--TVGGLRHLQAL 174
           +S+ +A  Q  TSSW      Y RY   VTN S  +L+N+KL    L   + GL      
Sbjct: 524 SSSPIAISQRKTSSWISKGVTYYRYSAIVTNKSAKELTNLKLSISKLYGPIWGLTK-AGN 582

Query: 175 SFL*PLHISSVSRPSSIRDVCLHPTRPSGHLHS 273
           S+  P  I+S+    S+  V +H   P+  L S
Sbjct: 583 SYGFPSWINSLPVGKSMEFVYIHSASPANVLVS 615


>tr|Q8L6S6|Q8L6S6_FRAAN Endo-beta-1,4-glucanase OS=Fragaria ananassa
           GN=faEG3 PE=4 SV=1
          Length = 620

 Score = 37.4 bits (85), Expect = 0.41
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +1

Query: 4   SANVAFQQVLTSSWTQSNKIYRRYLVKVTNVSRGKLSNIKLVSRDLTVGGLRHLQAL--S 177
           S  +A  Q +TSSW      Y RY   VTN S   L+N+KL    L  G L  L     S
Sbjct: 525 SGPIAIAQKVTSSWVSKGVTYYRYSTTVTNKSGKTLNNLKLTISKL-YGPLWGLTKTGDS 583

Query: 178 FL*PLHISSVSRPSSIRDVCLH 243
           ++ P  ++S+    S+  V +H
Sbjct: 584 YVFPSWLNSLPAGKSLEFVYIH 605