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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918068
Clone id YMU001_000109_C04
Library
Length 611
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTGTAGAATACAACTTCTCAATAGAAGAAAAAAGAATTAAAAGGAGAAACCCA
ACTTTGTCACCAACTGCTGGAATCTATCAATTCTAGCAATAGTTTGGCCTGCGAGCGGAG
GACCTCTTCTCTTGCCTTGCTGATGGACAGGGACGCCGTCGCCTGGTCTACCTGCTCTAG
AACTCTCAAAAACACGTCTCCGAGCAGCTCATGCAACTCTTCTAACGCACCCTCCGCTGA
CAATTGGAGCTCTGCGTTCTCTTCGTTGCCACTTGGAAGTAAATCACCCACTAAAAGCAG
TAAGAACTCCGAGCATTTCAGCCTCATTGCTTTATCTACATGACCATGTTTCACCAGCTC
TGAAATCTTCTTTACACCTTGATGCTTTAGAAAGTCCTGCTGGTTGATGGGTGTATCGAG
CAACAAAGCGGGCAAAGCATCTAAGCAGGCACCCTGCTCGAGAACTCCACCTGCTGACAA
TAACTCAATCACCTCCTTTATAGCCATGTGTTGTGATGCTAAAACTCTGCTCCCTTTGTC
GAGAAGACAGCACCCTTCTAACACTCTTAGAGCCAGTGCAACTTCATAATCTGTTGGAGC
ACTCACGACCT
■■Homology search results ■■ -
sp_hit_id Q05146
Definition sp|Q05146|OMPA_BORAV Outer membrane protein A OS=Bordetella avium
Align length 38
Score (bit) 30.8
E-value 5.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918068|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_C04.
         (611 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05146|OMPA_BORAV Outer membrane protein A OS=Bordetella aviu...    31   5.7  
sp|P35776|VA2_SOLRI Venom allergen 2 OS=Solenopsis richteri PE=1...    30   9.7  

>sp|Q05146|OMPA_BORAV Outer membrane protein A OS=Bordetella avium
           GN=ompA PE=3 SV=1
          Length = 194

 Score = 30.8 bits (68), Expect = 5.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 190 FESSRAGRPG-DGVPVHQQGKRRGPPLAGQTIARIDRF 80
           F +   G PG DGVPV QQ K +  P+A + +   D F
Sbjct: 51  FWTPATGIPGCDGVPVAQQPKEKPAPMAAKVVFNADTF 88


>sp|P35776|VA2_SOLRI Venom allergen 2 OS=Solenopsis richteri PE=1
           SV=2
          Length = 119

 Score = 30.0 bits (66), Expect = 9.7
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 434 KASKQAPCSRTPPADNNSITSFIAMCCDAKTLLPLSRRQHPSN 562
           K SK  P   T PAD  +    ++ C D +T  P S RQ   N
Sbjct: 57  KNSKMCPKIITDPADVENCKKVVSRCVDRETQRPRSNRQKAIN 99
tr_hit_id A9NN48
Definition tr|A9NN48|A9NN48_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 185
Score (bit) 122.0
E-value 2.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918068|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_C04.
         (611 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NN48|A9NN48_PICSI Putative uncharacterized protein OS=Picea...   122   2e-26
tr|A7QEZ9|A7QEZ9_VITVI Chromosome chr16 scaffold_86, whole genom...    95   4e-18
tr|Q1RPS7|Q1RPS7_PHYPA Impaired sucrose induction 1-like protein...    94   8e-18
tr|Q5TJC4|Q5TJC4_MEDTR Impaired sucrose induction 1-like protein...    93   1e-17
tr|Q5TJC5|Q5TJC5_MESCR Impaired sucrose induction 1-like protein...    91   5e-17
tr|B4FND2|B4FND2_MAIZE Putative uncharacterized protein OS=Zea m...    89   2e-16
tr|Q658H7|Q658H7_ORYSJ Os06g0129300 protein OS=Oryza sativa subs...    88   3e-16
tr|Q5TJC3|Q5TJC3_ORYSA Impaired sucrose induction 1-like protein...    88   3e-16
tr|Q84J43|Q84J43_ARATH Putative uncharacterized protein At4g2775...    88   4e-16
tr|Q5TJC6|Q5TJC6_SOLTU Impaired sucrose induction 1-like protein...    88   4e-16
tr|B8BHW7|B8BHW7_ORYSI Putative uncharacterized protein OS=Oryza...    82   2e-14
tr|B8B1Z5|B8B1Z5_ORYSI Putative uncharacterized protein OS=Oryza...    77   8e-13
tr|Q9T097|Q9T097_ARATH Putative uncharacterized protein AT4g2775...    76   1e-12
tr|Q7XCP3|Q7XCP3_ORYSJ Impaired sucrose induction 1, putative OS...    74   7e-12
tr|A3C6J6|A3C6J6_ORYSJ Putative uncharacterized protein OS=Oryza...    74   7e-12
tr|A9SE40|A9SE40_PHYPA Predicted protein OS=Physcomitrella paten...    58   5e-07
tr|A3B804|A3B804_ORYSJ Putative uncharacterized protein OS=Oryza...    49   3e-04
tr|Q9FWC2|Q9FWC2_ORYSJ Putative uncharacterized protein OSJNBb00...    46   0.002
tr|Q5K867|Q5K867_CRYNE Putative uncharacterized protein OS=Crypt...    36   2.0  
tr|Q55MK3|Q55MK3_CRYNE Putative uncharacterized protein OS=Crypt...    36   2.0  
tr|B3DJX2|B3DJX2_DANRE Snx19a protein OS=Danio rerio GN=snx19a P...    34   5.8  
tr|A2BFT9|A2BFT9_DANRE Novel protein similar to vertebrate sorti...    34   5.8  
tr|B6UA54|B6UA54_MAIZE Ubiquitin-protein ligase OS=Zea mays PE=2...    33   10.0 

>tr|A9NN48|A9NN48_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 342

 Score =  122 bits (305), Expect = 2e-26
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S PT  EVALAL+VLEGCCLLD+ SR LA QHMAIKE++ LLSAG  L Q AC     
Sbjct: 157 IASPPTSNEVALALQVLEGCCLLDRDSRTLAQQHMAIKEIVRLLSAGSTLVQRACLDALI 216

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEFXXXXXXXXLPSG------ 268
                   NQ++F +H GV++++ELVK+G++D+ +RLKC+EF        +PS       
Sbjct: 217 ALMLDSLENQKEFERHHGVRQVAELVKNGNIDEELRLKCAEFLLLVVGNVIPSSSKFIDN 276

Query: 267 --NEENAELQLSXXXXXXXXXXXXGDVFLRVLEQVDQATASLSISKAREEVLRSQAKLLL 94
             +EE  E                G+    +L    Q  +S+  S+ ++  L+ QA+ LL
Sbjct: 277 IEDEEGREEPSRIESVQDDILELLGEEIASLLWAAGQLWSSID-SERKQSSLQFQAQQLL 335

Query: 93  ELIDS 79
           + +DS
Sbjct: 336 DCLDS 340


>tr|A7QEZ9|A7QEZ9_VITVI Chromosome chr16 scaffold_86, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037220001
           PE=4 SV=1
          Length = 298

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
 Frame = -3

Query: 606 VSAP-TDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           +S+P TD EVALALRVLEGCCLL + S + A QH AI+ ++++LS  GVLEQGAC     
Sbjct: 129 ISSPSTDAEVALALRVLEGCCLLHRESTIFAHQHKAIEILMDILSTRGVLEQGACLDALI 188

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                   NQ DF    G+++++ +++   VD+ +R+KC EF
Sbjct: 189 SIMLDSSANQMDFESCDGIEEVAHIIRDKQVDENLRMKCGEF 230


>tr|Q1RPS7|Q1RPS7_PHYPA Impaired sucrose induction 1-like protein
           OS=Physcomitrella patens GN=isi1 PE=2 SV=1
          Length = 315

 Score = 93.6 bits (231), Expect = 8e-18
 Identities = 51/110 (46%), Positives = 67/110 (60%)
 Frame = -3

Query: 594 TDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXXXXXXX 415
           T  EV LALRVLEGCCLL  G R  ASQH A+ EVI+L  AGG   Q AC          
Sbjct: 139 TTAEVVLALRVLEGCCLLYSGCRTTASQHAAVSEVIDLFLAGGSPVQSACLDGLLAIMLE 198

Query: 414 XPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEFXXXXXXXXLPSGN 265
            P NQ++F +  G++KI+E++++ H+D ++RLK +EF        LPS N
Sbjct: 199 SPSNQKEFERVHGLRKIAEMLRNSHLDPSIRLKIAEFIVILMSQILPSSN 248


>tr|Q5TJC4|Q5TJC4_MEDTR Impaired sucrose induction 1-like protein
           OS=Medicago truncatula GN=isi1 PE=2 SV=1
          Length = 307

 Score = 92.8 bits (229), Expect = 1e-17
 Identities = 47/102 (46%), Positives = 63/102 (61%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S  TD E+ALALRVLEGCCLL   S  LA QH A++ ++ +LS  GVLEQ AC     
Sbjct: 138 LTSPSTDDEIALALRVLEGCCLLHPHSTTLAHQHNAVQVLLNILSTRGVLEQSACLDALI 197

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                   NQ DF K  G+ ++++L++   VD+ +RLKC EF
Sbjct: 198 SLMVDSSPNQMDFEKCNGIMEVADLIRDKQVDENLRLKCGEF 239


>tr|Q5TJC5|Q5TJC5_MESCR Impaired sucrose induction 1-like protein
           OS=Mesembryanthemum crystallinum GN=isi1 PE=2 SV=1
          Length = 310

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S  TD EVALALRVLEGCCL+ + S + A QH AI  ++ +LS  GVLEQGAC     
Sbjct: 139 LTSPSTDTEVALALRVLEGCCLIHRQSTIFAHQHKAILVLMNILSNRGVLEQGACLDALI 198

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                   NQ DF    G+++++ +++   VD+ +R+KC EF
Sbjct: 199 ALMLDSTANQMDFETCNGIEEVAAIIRDKQVDENLRMKCGEF 240


>tr|B4FND2|B4FND2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 297

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 45/102 (44%), Positives = 64/102 (62%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S PT  E+ALALRVLEGCCLL      LA ++ A+K ++ +L++ G  EQG C     
Sbjct: 131 ITSPPTGSEIALALRVLEGCCLLYSRCTALAHKYKAVKVLLNILASRGPTEQGVCLDTLI 190

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                 P NQ DF ++ G++K++EL+K   V+K +RLKC EF
Sbjct: 191 SLMLDSPSNQMDFEEYSGLEKVAELLKDVQVEKHIRLKCGEF 232


>tr|Q658H7|Q658H7_ORYSJ Os06g0129300 protein OS=Oryza sativa subsp.
           japonica GN=P0538C01.15 PE=2 SV=1
          Length = 302

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S PTD E+ALALRVLEGCCLL      LA ++ A+K ++ +L+  G  EQG C     
Sbjct: 136 ITSPPTDNEIALALRVLEGCCLLYSRCTALAHKYKAVKVILNILANRGPAEQGVCLDALI 195

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                 P NQ DF +  G++K++EL+K   V++ +RLKC EF
Sbjct: 196 SLMLDSPPNQMDFEEFSGLEKVAELLKDVQVEEHIRLKCGEF 237


>tr|Q5TJC3|Q5TJC3_ORYSA Impaired sucrose induction 1-like protein
           OS=Oryza sativa GN=isi1 PE=2 SV=1
          Length = 302

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S PTD E+ALALRVLEGCCLL      LA ++ A+K ++ +L+  G  EQG C     
Sbjct: 136 ITSPPTDNEIALALRVLEGCCLLYSRCTALAHKYKAVKVILNILANRGPAEQGVCLDALI 195

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                 P NQ DF +  G++K++EL+K   V++ +RLKC EF
Sbjct: 196 SLMLDSPPNQMDFEEFSGLEKVAELLKDVQVEEHIRLKCGEF 237


>tr|Q84J43|Q84J43_ARATH Putative uncharacterized protein At4g27750
           (Impaired sucrose induction 1) OS=Arabidopsis thaliana
           GN=isi1 PE=2 SV=1
          Length = 305

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S  TD EVA+ALRVLEGCCLL   S VLA +H A++ ++ +LS  GVLEQGAC     
Sbjct: 136 ITSPSTDAEVAVALRVLEGCCLLHPQSTVLAHKHGAVRVMMNVLSTRGVLEQGACLDALI 195

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                   NQ DF    G+++++ L++    D+ +RL+C EF
Sbjct: 196 SVLLDSSANQVDFGACNGIEEVAMLMRDKQADENLRLRCGEF 237


>tr|Q5TJC6|Q5TJC6_SOLTU Impaired sucrose induction 1-like protein
           OS=Solanum tuberosum GN=isi1 PE=2 SV=1
          Length = 294

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 46/102 (45%), Positives = 62/102 (60%)
 Frame = -3

Query: 609 VVSAPTDYEVALALRVLEGCCLLDKGSRVLASQHMAIKEVIELLSAGGVLEQGACXXXXX 430
           + S  TD EV+LALRVLEGCCL+   S VLA Q+ AI  ++ +LS  GVL QGAC     
Sbjct: 125 ITSPSTDSEVSLALRVLEGCCLIHCESNVLAHQYKAIPVLMNILSTRGVLGQGACLDALI 184

Query: 429 XXXXXXPINQQDFLKHQGVKKISELVKHGHVDKAMRLKCSEF 304
                   NQ DF    G+++++ L++   VD+ +RLKC EF
Sbjct: 185 AIMLDSSANQADFEACNGIEEVAILIRDKQVDEKLRLKCGEF 226