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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918078
Clone id YMU001_000109_D02
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCGAAGGTTAGCTCATCGCTAATAAAGTGAGCTAATTAGTACTTTAATGACAAGCTGCA
ATGAGACAATAATCAGAAGTACACTGCGATACAATTAGCCTCCACATCTAATACAGGAGG
TAATAATTTGATCGCATGACTTCTTGCAACTAATGAGACTCTTGTCCATTGAGCTCCTAT
ATATGGCAGCTACATACAGCGGGTTGTTTTCACAGTAGGGTTCAGATAGCTTTCCATGAG
CTGACCCAATCCTTTACACTTATCGTGATTATATATAATTATGGCAAGCGCAGATCACTT
TCTTGCGGAGAAGACATGAAAGGTGGGGTTGCACTAGATGCCACTCGATTACGTGAGGGC
AACACCTCAGCCCCGTCAGCAGGAGATGATCTTCTCCTACCTCTCTCACCTTTGCTATTT
TGAGCAAACTTCATGCTTGCATGGTGCATCCCCAAACTTTCCTCTTCAGCTGACCACTCT
CTTCCATAGTATGATTCCTCGGTTGCATCTGAACTCTTTGAAGGCCCAAAGAACATTCCT
CCCC
■■Homology search results ■■ -
sp_hit_id A8MI49
Definition sp|A8MI49|CINA_ALKOO Putative competence-damage inducible protein OS=Alkaliphilus oremlandii (strain OhILAs)
Align length 71
Score (bit) 29.6
E-value 9.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918078|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_D02.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8MI49|CINA_ALKOO Putative competence-damage inducible protei...    30   9.9  

>sp|A8MI49|CINA_ALKOO Putative competence-damage inducible protein
           OS=Alkaliphilus oremlandii (strain OhILAs) GN=cinA PE=3
           SV=1
          Length = 413

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEE---SYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADG 372
           GG+  GP+K  D T+E   S++G++    EESL    A  K    +  E  R++    +G
Sbjct: 67  GGL--GPTKD-DMTKETAASFFGKKLIPHEESLKKIEAYFKGRGLNVNEGNRKQGYFPEG 123

Query: 371 AEVLPSRNRVA 339
           + VLP+ N  A
Sbjct: 124 SIVLPNPNGTA 134
tr_hit_id A7QP22
Definition tr|A7QP22|A7QP22_VITVI Chromosome chr1 scaffold_135, whole genome shotgun sequence OS=Vitis vinifera
Align length 55
Score (bit) 75.9
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918078|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_D02.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QP22|A7QP22_VITVI Chromosome chr1 scaffold_135, whole genom...    76   1e-12
tr|Q5K410|Q5K410_9ROSI Nitrate transporter OS=Populus tremula x ...    69   2e-10
tr|Q5K409|Q5K409_9ROSI Nitrate transporter OS=Populus tremula x ...    68   3e-10
tr|Q84MZ7|Q84MZ7_9ROSI High affinity nitrate transporter protein...    68   4e-10
tr|Q8RVZ3|Q8RVZ3_MAIZE High affinity nitrate transporter (Fragme...    66   1e-09
tr|Q84VI9|Q84VI9_MAIZE Putative high affinity nitrate transporte...    66   1e-09
tr|Q53CL7|Q53CL7_MAIZE Putative high affinity nitrate transporte...    66   1e-09
tr|B4FSV9|B4FSV9_MAIZE Putative uncharacterized protein OS=Zea m...    66   1e-09
tr|A6QKV9|A6QKV9_MAIZE Putative high affinity nitrate transporte...    66   1e-09
tr|Q76C04|Q76C04_PHYPA Nitrate transporter OS=Physcomitrella pat...    66   1e-09
tr|Q6ZH34|Q6ZH34_ORYSJ Os02g0112100 protein OS=Oryza sativa subs...    66   1e-09
tr|O82138|O82138_ORYSA High affinity nitrate transporter OS=Oryz...    66   1e-09
tr|B8AGH0|B8AGH0_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|A9SG72|A9SG72_PHYPA Predicted protein OS=Physcomitrella paten...    66   1e-09
tr|A5JUX2|A5JUX2_9ROSI Nitrate transporter OS=Citrus sinensis x ...    66   1e-09
tr|A3A2D3|A3A2D3_ORYSJ Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|A2X014|A2X014_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|A2X013|A2X013_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|Q9ATG9|Q9ATG9_WHEAT High affinity nitrate transporter OS=Trit...    65   2e-09
tr|P93182|P93182_HORVU BCH1 OS=Hordeum vulgare PE=2 SV=1               65   2e-09
tr|Q9XEG5|Q9XEG5_HORVU Putative high affinity nitrate transporte...    65   3e-09
tr|Q9XEG4|Q9XEG4_HORVU Putative high affinity nitrate transporte...    65   3e-09
tr|Q940R8|Q940R8_WHEAT High-affinity nitrate transporter OS=Trit...    65   3e-09
tr|Q6PRP8|Q6PRP8_CUCSA High-affinity nitrate transporter OS=Cucu...    65   3e-09
tr|A0EXC1|A0EXC1_HORVD High affinity nitrate transporter NRT2.6 ...    65   3e-09
tr|Q9LXH0|Q9LXH0_ARATH High-affinity nitrate transporter-like pr...    64   7e-09
tr|Q76IJ7|Q76IJ7_PRUPE High-affinity nitrate transporter (Nitrat...    64   7e-09
tr|Q76IH8|Q76IH8_PRUPE High-affinity nitrate transporter (Nitrat...    64   7e-09
tr|Q9FYU4|Q9FYU4_WHEAT High affinity nitrate transporter TaNRT2 ...    63   9e-09
tr|Q76C03|Q76C03_PHYPA Nitrate transporter OS=Physcomitrella pat...    63   1e-08

>tr|A7QP22|A7QP22_VITVI Chromosome chr1 scaffold_135, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002765001
           PE=4 SV=1
          Length = 505

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 33/55 (60%), Positives = 40/55 (72%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPA 378
           GGMF GPS   +ATEE YY  EW+++E+  G HH S+KFA NS+GERGRR  S A
Sbjct: 441 GGMFCGPSSKENATEEDYYSSEWNSKEKEKGFHHGSLKFADNSRGERGRRVGSAA 495


>tr|Q5K410|Q5K410_9ROSI Nitrate transporter OS=Populus tremula x
           Populus tremuloides GN=tNit2.1 PE=2 SV=1
          Length = 530

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -3

Query: 542 GGMFFGPSKSS-DATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGAE 366
           GGMFF PSK    +TEESYY  EW  +E+  GMH  S+KFA+NS+ ERG+R +S      
Sbjct: 465 GGMFFPPSKDVVKSTEESYYASEWDEDEKQRGMHQKSLKFAENSRSERGKRIASAPTPPS 524

Query: 365 VLPSR 351
             P+R
Sbjct: 525 TTPNR 529


>tr|Q5K409|Q5K409_9ROSI Nitrate transporter OS=Populus tremula x
           Populus tremuloides GN=tNit2.2 PE=2 SV=1
          Length = 508

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSS 384
           GGMF GPS +  ATEE YY  EW++EE+  G+H +S+KFA NS+ ERGR+  S
Sbjct: 443 GGMFCGPSSTKIATEEDYYLSEWNSEEKEKGLHLSSLKFADNSRSERGRKEDS 495


>tr|Q84MZ7|Q84MZ7_9ROSI High affinity nitrate transporter protein
           (Fragment) OS=Populus alba x Populus grandidentata
           GN=nrt2 PE=2 SV=1
          Length = 254

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = -3

Query: 542 GGMFFGPSKSS-DATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGAE 366
           GGMFF PSK    +TEESYY  EW  +E   GMH  S+KFA+NS+ ERG           
Sbjct: 189 GGMFFPPSKDVVKSTEESYYASEWDEDERQKGMHQQSLKFAENSRSERG----------- 237

Query: 365 VLPSRNRVASSATPP 321
                NR+AS+ TPP
Sbjct: 238 -----NRIASAPTPP 247


>tr|Q8RVZ3|Q8RVZ3_MAIZE High affinity nitrate transporter (Fragment)
           OS=Zea mays GN=nrt2-1 PE=2 SV=1
          Length = 346

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGA 369
           G MFF PS ++D  EE YY  EW+ +E+S G+H AS+KFA+NS+ ERG+R    AD A
Sbjct: 285 GSMFFPPSATAD--EEGYYASEWNDDEKSKGLHSASLKFAENSRSERGKRNVIQADAA 340


>tr|Q84VI9|Q84VI9_MAIZE Putative high affinity nitrate transporter
           OS=Zea mays GN=nrt2.1 PE=2 SV=1
          Length = 524

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGA 369
           G MFF PS ++D  EE YY  EW+ +E+S G+H AS+KFA+NS+ ERG+R    AD A
Sbjct: 463 GSMFFPPSATAD--EEGYYASEWNDDEKSKGLHSASLKFAENSRSERGKRNVIQADAA 518


>tr|Q53CL7|Q53CL7_MAIZE Putative high affinity nitrate transporter
           OS=Zea mays GN=nrt2.2 PE=2 SV=1
          Length = 524

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGA 369
           G MFF PS ++D  EE YY  EW+ +E+S G+H AS+KFA+NS+ ERG+R    AD A
Sbjct: 463 GSMFFPPSATAD--EEGYYASEWNDDEKSKGLHSASLKFAENSRSERGKRNVIQADAA 518


>tr|B4FSV9|B4FSV9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 524

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGA 369
           G MFF PS ++D  EE YY  EW+ +E+S G+H AS+KFA+NS+ ERG+R    AD A
Sbjct: 463 GSMFFPPSATAD--EEGYYASEWNDDEKSKGLHSASLKFAENSRSERGKRNVIQADAA 518


>tr|A6QKV9|A6QKV9_MAIZE Putative high affinity nitrate transporter
           OS=Zea mays GN=nrt2.2 PE=2 SV=1
          Length = 524

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPADGA 369
           G MFF PS ++D  EE YY  EW+ +E+S G+H AS+KFA+NS+ ERG+R    AD A
Sbjct: 463 GSMFFPPSATAD--EEGYYASEWNDDEKSKGLHSASLKFAENSRSERGKRNVIQADAA 518


>tr|Q76C04|Q76C04_PHYPA Nitrate transporter OS=Physcomitrella patens
           GN=NRT2;3 PE=2 SV=2
          Length = 549

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 32/56 (57%), Positives = 38/56 (67%)
 Frame = -3

Query: 542 GGMFFGPSKSSDATEESYYGREWSAEEESLGMHHASMKFAQNSKGERGRRRSSPAD 375
           GG+FF PSKS   TEE YY  EWSAEE+  G H  SMKFA N++ ERG+R  +  D
Sbjct: 475 GGIFFPPSKS---TEEDYYASEWSAEEQEQGKHATSMKFASNARSERGKRGLNSPD 527