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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918080
Clone id YMU001_000109_D04
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACAATTAGTGAAGCTGAACTGAAGAAATGTTTTGCAAATGAGGATGGCTTTCCAAGCTTT
TCTGATGTGAGGCATAACAGAGCAGACCCATCTTTATTGAGCCTGTACAGCTCCCTTTAC
AGGAGTGCAGATACTGTAAAATGCCTTGATGATTGTGCGGAAGCTGACTGGTTGTCCTCA
TCGGGCAACTCATGCGAAGAGGATGCACAGGAAAGGTATTGGGTGACTGCCACTGGGACT
GACAGCTGGCAGGGTAGTGGGCTTCTTACTGAAATGTTCAAGAAGTCCGAAGAGAGTGAT
GATCCGGATGATAATTTCCAAGATTTGACTGCTTTACTTATGAAGGCCAAGTCATTTAAG
TCAAGTGACAATGTTTTCTTCAAGGGACAAAGTAAGGAGAATGTGGGTTCCTACTCTGGA
GATGATTCTGGAAGTATCGACGGAACAGTGAAGTCGGAGGCCCTAGAGTCTGAAGAGGTC
GTGTCCAAAAGG
■■Homology search results ■■ -
sp_hit_id A7KAM4
Definition sp|A7KAM4|ATG13_PENCH Autophagy-related protein 13 OS=Penicillium chrysogenum
Align length 66
Score (bit) 32.0
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918080|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_D04.
         (492 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7KAM4|ATG13_PENCH Autophagy-related protein 13 OS=Penicilliu...    32   1.6  
sp|Q8DQ24|PRSA_STRR6 Foldase protein prsA OS=Streptococcus pneum...    31   2.7  
sp|Q97R51|PRSA_STRPN Foldase protein prsA OS=Streptococcus pneum...    31   2.7  
sp|Q04KU8|PRSA_STRP2 Foldase protein prsA OS=Streptococcus pneum...    31   2.7  
sp|Q13316|DMP1_HUMAN Dentin matrix acidic phosphoprotein 1 OS=Ho...    31   2.7  
sp|Q8PCE2|PDXA_XANCP 4-hydroxythreonine-4-phosphate dehydrogenas...    31   3.5  
sp|Q4UR40|PDXA_XANC8 4-hydroxythreonine-4-phosphate dehydrogenas...    31   3.5  
sp|P03448|HEMA_I72A5 Hemagglutinin OS=Influenza A virus (strain ...    31   3.5  
sp|Q8PP24|PDXA_XANAC 4-hydroxythreonine-4-phosphate dehydrogenas...    30   5.9  

>sp|A7KAM4|ATG13_PENCH Autophagy-related protein 13 OS=Penicillium
           chrysogenum GN=atg13 PE=3 SV=1
          Length = 974

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 172 LSSSGNSCEEDAQERYWVTATGTDSWQGSGLLTEMFKKSEESDDPDD-NFQDLTALLMKA 348
           LS+  N  E+D       +AT +++  GSGLLTE    S ES   DD N  +   +L   
Sbjct: 534 LSAGANRLEDDNSSGR-ASATSSNAQPGSGLLTEATGTSAESIQADDENISEFLKMLDSK 592

Query: 349 KSFKSS 366
           K   +S
Sbjct: 593 KDLMNS 598


>sp|Q8DQ24|PRSA_STRR6 Foldase protein prsA OS=Streptococcus
           pneumoniae (strain ATCC BAA-255 / R6) GN=prsA PE=3 SV=1
          Length = 313

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +1

Query: 223 VTATGTDSWQGSGLLTEMFKKSEESDDPDDNFQDLTALLMKAKSFKSS 366
           +TATGT ++     + ++ KK+E+S + DD  + L  +++  K   S+
Sbjct: 222 ITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDST 269


>sp|Q97R51|PRSA_STRPN Foldase protein prsA OS=Streptococcus
           pneumoniae GN=prsA PE=3 SV=1
          Length = 313

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +1

Query: 223 VTATGTDSWQGSGLLTEMFKKSEESDDPDDNFQDLTALLMKAKSFKSS 366
           +TATGT ++     + ++ KK+E+S + DD  + L  +++  K   S+
Sbjct: 222 ITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDST 269


>sp|Q04KU8|PRSA_STRP2 Foldase protein prsA OS=Streptococcus
           pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=prsA
           PE=3 SV=1
          Length = 313

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +1

Query: 223 VTATGTDSWQGSGLLTEMFKKSEESDDPDDNFQDLTALLMKAKSFKSS 366
           +TATGT ++     + ++ KK+E+S + DD  + L  +++  K   S+
Sbjct: 222 ITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDST 269


>sp|Q13316|DMP1_HUMAN Dentin matrix acidic phosphoprotein 1 OS=Homo
           sapiens GN=DMP1 PE=1 SV=2
          Length = 513

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/76 (26%), Positives = 34/76 (44%)
 Frame = +1

Query: 145 LDDCAEADWLSSSGNSCEEDAQERYWVTATGTDSWQGSGLLTEMFKKSEESDDPDDNFQD 324
           LD+    D     G+S +E   E +WV   G+D     G  +E+  +  +SDDP+    +
Sbjct: 168 LDNEDRVDSKPEGGDSTQESESEEHWVGG-GSDGESSHGDGSELDDEGMQSDDPESIRSE 226

Query: 325 LTALLMKAKSFKSSDN 372
                M +   KS ++
Sbjct: 227 RGNSRMNSAGMKSKES 242


>sp|Q8PCE2|PDXA_XANCP 4-hydroxythreonine-4-phosphate dehydrogenase
           OS=Xanthomonas campestris pv. campestris GN=pdxA PE=3
           SV=1
          Length = 322

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 223 PNTFPVHPLRMSCPMRTTSQLPHNHQGILQYLHSCKGSCTGSIKMGLLCYASHQ 62
           P   P+HP+R + P R  +  P N   ++  L    G C      G++    H+
Sbjct: 65  PGDLPLHPVRQAAPTRFGTPDPANAAAVIAGLLGAAGDCLSGKLQGIVTGPVHK 118


>sp|Q4UR40|PDXA_XANC8 4-hydroxythreonine-4-phosphate dehydrogenase
           OS=Xanthomonas campestris pv. campestris (strain 8004)
           GN=pdxA PE=3 SV=1
          Length = 322

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 223 PNTFPVHPLRMSCPMRTTSQLPHNHQGILQYLHSCKGSCTGSIKMGLLCYASHQ 62
           P   P+HP+R + P R  +  P N   ++  L    G C      G++    H+
Sbjct: 65  PGDLPLHPVRQAAPTRFGTPDPANAAAVIAGLLGAAGDCLSGKLQGIVTGPVHK 118


>sp|P03448|HEMA_I72A5 Hemagglutinin OS=Influenza A virus (strain
           A/Shearwater/Australia/1972 H6N5) GN=HA PE=3 SV=2
          Length = 566

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = -3

Query: 178 RTTSQLPHNHQ----GILQYLHSCKGSCTGSIKMGLLCYASHQKSLESHPHLQNISSVQL 11
           R  SQL  N      G  ++ H C   C  S+K G   Y  +Q   ES  + Q I SV+L
Sbjct: 465 RVKSQLRDNAMILGNGCFEFWHKCDDECMESVKNGTYDYPKYQD--ESKLNRQEIESVKL 522


>sp|Q8PP24|PDXA_XANAC 4-hydroxythreonine-4-phosphate dehydrogenase
           OS=Xanthomonas axonopodis pv. citri GN=pdxA PE=3 SV=1
          Length = 323

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = -3

Query: 229 QSPNTFPVHPLRMSCPMRTTSQLPHNHQGILQYLHSCKGSCTGSIKMGLLCYASHQKSLE 50
           ++P   P+HP+R +   R  +  P N   ++  L S    C      G++    H+ ++ 
Sbjct: 64  RAPGDLPLHPIRQAVATRFGAPDPANAAAVIAGLRSAAADCLAGRLQGIVTGPVHKAAIN 123

Query: 49  S 47
           +
Sbjct: 124 A 124
tr_hit_id B7ZXI9
Definition tr|B7ZXI9|B7ZXI9_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 47
Score (bit) 38.1
E-value 0.23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918080|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_D04.
         (492 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7ZXI9|B7ZXI9_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.23 
tr|B4FWR2|B4FWR2_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.23 
tr|B3NUP0|B3NUP0_DROER GG19186 OS=Drosophila erecta GN=GG19186 P...    38   0.29 
tr|Q8HY99|Q8HY99_NOCLE Dentin matrix protein 1 (Fragment) OS=Noc...    37   0.39 
tr|Q8HYA0|Q8HYA0_NOCAL Dentin matrix protein 1 (Fragment) OS=Noc...    37   0.51 
tr|A7P6D0|A7P6D0_VITVI Chromosome chr9 scaffold_7, whole genome ...    36   1.1  
tr|B4PWF7|B4PWF7_DROYA GE17750 OS=Drosophila yakuba GN=GE17750 P...    35   1.9  
tr|A7T7K9|A7T7K9_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   2.4  
tr|Q8H1U1|Q8H1U1_GOSHI Phospholipase D beta 1 isoform 1b OS=Goss...    34   3.2  
tr|Q8HYA4|Q8HYA4_PTEPA Dentin matrix protein 1 (Fragment) OS=Pte...    34   3.3  
tr|A7PDQ5|A7PDQ5_VITVI Chromosome chr11 scaffold_13, whole genom...    34   4.3  
tr|Q4DZ63|Q4DZ63_TRYCR Putative uncharacterized protein OS=Trypa...    33   5.5  
tr|Q4D873|Q4D873_TRYCR Putative uncharacterized protein (Fragmen...    33   5.5  
tr|Q6ZC72|Q6ZC72_ORYSJ Os08g0109100 protein OS=Oryza sativa subs...    33   5.6  
tr|Q6ZC71|Q6ZC71_ORYSJ Sac domain-containing inositol phosphatas...    33   5.6  
tr|B8BA47|B8BA47_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.6  
tr|B8BA45|B8BA45_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.6  
tr|A3BNX5|A3BNX5_ORYSJ Putative uncharacterized protein OS=Oryza...    33   5.6  
tr|Q0CDA7|Q0CDA7_ASPTN Predicted protein OS=Aspergillus terreus ...    33   7.1  
tr|Q8H1U2|Q8H1U2_GOSHI Phospholipase D beta 1 isoform 1a OS=Goss...    33   9.3  
tr|A7PZ97|A7PZ97_VITVI Chromosome chr15 scaffold_40, whole genom...    33   9.3  
tr|A5BNW1|A5BNW1_VITVI Putative uncharacterized protein OS=Vitis...    33   9.3  

>tr|B7ZXI9|B7ZXI9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 913

 Score = 38.1 bits (87), Expect = 0.23
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +1

Query: 154 CAEADWLSSSGNSCEEDAQERY--WVTATGTDSWQGSGLLTEMFKKS 288
           C E  WLSSS  SCEED   RY  + TA   + W G  LL +  + S
Sbjct: 775 CGELIWLSSSVESCEEDIFRRYLAFTTADVENGWYGGTLLYDRDENS 821


>tr|B4FWR2|B4FWR2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 267

 Score = 38.1 bits (87), Expect = 0.23
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +1

Query: 154 CAEADWLSSSGNSCEEDAQERY--WVTATGTDSWQGSGLLTEMFKKS 288
           C E  WLSSS  SCEED   RY  + TA   + W G  LL +  + S
Sbjct: 129 CGELIWLSSSVESCEEDIFRRYLAFTTADVENGWYGGTLLYDRDENS 175


>tr|B3NUP0|B3NUP0_DROER GG19186 OS=Drosophila erecta GN=GG19186 PE=4
           SV=1
          Length = 730

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -3

Query: 328 SNLGNYHPDHHSLRTS*TFQ*EAHYPASCQSQWQS---PNTFPVHPLRMSCPMRTTSQLP 158
           S++G++H  HH   T        H P   QSQ QS   P T P+H L+   P   +S  P
Sbjct: 130 SSVGHHHLQHHHQHT------HPHAPQQSQSQSQSLTQPQTQPLHQLQQPHPASASSTAP 183

Query: 157 HNH 149
            +H
Sbjct: 184 QSH 186


>tr|Q8HY99|Q8HY99_NOCLE Dentin matrix protein 1 (Fragment)
           OS=Noctilio leporinus GN=DMP1 PE=4 SV=1
          Length = 334

 Score = 37.4 bits (85), Expect = 0.39
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
 Frame = +1

Query: 124 SADTVKCLDDCAEADWLSSS--------GNSCEEDAQERYWVTATGT-DSWQGSGLLTEM 276
           SADT +  +D A+ D +S S        GNS  E   E +WV      DS  G G  +E 
Sbjct: 22  SADTTQSREDSAQ-DTISESRDLDNEDEGNSRLESESEEHWVGGGSEGDSSHGDG--SEF 78

Query: 277 FKKSEESDDPDDNFQDLTALLMKAKSFKSSDNVFFKGQSKENV 405
             +  +SDDPD N  + +     + S KS+++    G S E+V
Sbjct: 79  DDEGMQSDDPDTNRSERSXSRRNSASVKSTES---HGTSGEHV 118


>tr|Q8HYA0|Q8HYA0_NOCAL Dentin matrix protein 1 (Fragment)
           OS=Noctilio albiventris GN=DMP1 PE=4 SV=1
          Length = 334

 Score = 37.0 bits (84), Expect = 0.51
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
 Frame = +1

Query: 124 SADTVKCLDDCAEADWLSSS--------GNSCEEDAQERYWVTATGT-DSWQGSGLLTEM 276
           SADT +  +D A+ D +S S        GNS  E   E +WV      DS  G G  +E 
Sbjct: 22  SADTTQSREDSAQ-DTISESRDLDNEDEGNSRLESESEEHWVGGGSEGDSSHGDG--SEF 78

Query: 277 FKKSEESDDPDDNFQDLTALLMKAKSFKSSDNVFFKGQSKENV 405
             +  +SDDPD N  + +     + S KS ++    G S E+V
Sbjct: 79  DDEGMQSDDPDTNRSERSRSRXNSASVKSXES---HGSSGEHV 118


>tr|A7P6D0|A7P6D0_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034019001
           PE=4 SV=1
          Length = 775

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 160 EADWLSSSGNSCEEDAQER 216
           + DWLSSSGNSCEE+  ER
Sbjct: 693 DVDWLSSSGNSCEEETYER 711


>tr|B4PWF7|B4PWF7_DROYA GE17750 OS=Drosophila yakuba GN=GE17750 PE=4
           SV=1
          Length = 730

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 328 SNLGNYHPDHHSLRTS*TFQ*EAHYPASCQSQWQS-PNTFPVHPLRMSCPMRTTSQLPHN 152
           S++G++H  HH   T        H P   QSQ Q   +  P H L+   P   +S  PH+
Sbjct: 133 SSVGHHHLQHHHQHT------HPHAPQQSQSQSQPHSHPHPQHQLQQPHPASASSTAPHH 186

Query: 151 HQGI 140
           H  I
Sbjct: 187 HGSI 190


>tr|A7T7K9|A7T7K9_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g148992 PE=4 SV=1
          Length = 350

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 157 HNHQGILQYLHSCKGSCTG-SIKMGLLCYASHQKSLESHPHLQNISSVQLH 8
           H+H+GIL +LHS KG+      + G+L +   QK +  H H Q    + LH
Sbjct: 221 HSHKGILIHLHSHKGTLVHLHSQKGILIHLHSQKGILIHLHSQKGILIHLH 271



 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 157 HNHQGILQYLHSCKGSCTG-SIKMGLLCYASHQKSLESHPHLQNISSVQLH 8
           H+H+GIL +LHS KG       + G+L +    K +  H H Q    +QLH
Sbjct: 69  HSHKGILIHLHSQKGILIHLHSQKGILIHLHSHKGILIHLHSQKGILIQLH 119


>tr|Q8H1U1|Q8H1U1_GOSHI Phospholipase D beta 1 isoform 1b
           OS=Gossypium hirsutum PE=2 SV=1
          Length = 1162

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/77 (28%), Positives = 32/77 (41%)
 Frame = -3

Query: 334 KQSNLGNYHPDHHSLRTS*TFQ*EAHYPASCQSQWQSPNTFPVHPLRMSCPMRTTSQLPH 155
           +QS  G+Y P   + ++S T+Q  A YP    S +Q P  +              S   H
Sbjct: 177 QQSLSGHYPPPKSNPQSSSTYQQPAQYPPQSSSSYQQPGQYTPPESNSELLSTHISFSGH 236

Query: 154 NHQGILQYLHSCKGSCT 104
           N Q    YL +  GS +
Sbjct: 237 NRQDSTSYLAANSGSAS 253


>tr|Q8HYA4|Q8HYA4_PTEPA Dentin matrix protein 1 (Fragment)
           OS=Pteronotus parnellii GN=DMP1 PE=4 SV=1
          Length = 349

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +1

Query: 145 LDDCAEADWLSSSGNSCEEDAQERYWVTATGT-DSWQGSGLLTEMFKKSEESDDPDDNFQ 321
           LD+  E +     G S +E   E +WV      DS  G G  +E   +  +SDDPD   +
Sbjct: 50  LDNEGEGNSRLEGGGSTQESESEDHWVGGGSEGDSSHGDG--SEFDDEGMQSDDPDTVRK 107

Query: 322 DLTALLMKAKSFKSSDNVFFKGQSKENV 405
           + +   M + S KS+++    G S E+V
Sbjct: 108 ERSHSRMNSASVKSTES---NGNSDEHV 132