BP918101 |
Clone id |
YMU001_000109_F02 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000109_F02. |
Accession |
BP918101 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATCTTTANTGGTGGTGGTGGTCGTGGCTTCATCATCACAGGCTTGCAAATCCTGTCAAGA GTTTCTGTCTTCTTTTTAACCTCTGCGCACAGAAGAACTGGGTTTGCAGACCTAGGTAAA TGATCTTGTTGCTGTTTCTTCTCTCTTAACCAGTCTTCTGCCTTGTTGCATTCCATAATG ACCTTTTCTTTGTCCGCAGCATCAATATGATCAAATTTGGGATCTTTGGATCTTGCAGCT TCCCGGAAGCTATTTAAACAATAAATCAACTGCTCTAAACAAGGCCCACGGGACTCTTCT TCCTTAAACCGTTCCTCGATTGGATCTCCAAGCTTCTTTAGCTCAGCTAGCTTTGCAACA TAGACACCCTTTGTCTCATCTTCCCCTTCATCATAAAGCCAATCTTCTGTCTCCTGAAGC TTTGCAGCCAAATCTTCTCTTTCTGGATCTGTCGCATACTCATGATACTTCTCATACAGC TTGTTTCTCATATTATACACATACGCCTCTACAGCATTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O88600 |
Definition |
sp|O88600|HSP74_RAT Heat shock 70 kDa protein 4 OS=Rattus norvegicus |
Align length |
161 |
Score (bit) |
131.0 |
E-value |
2.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918101|Adiantum capillus-veneris mRNA, clone: YMU001_000109_F02. (520 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O88600|HSP74_RAT Heat shock 70 kDa protein 4 OS=Rattus norveg... 131 2e-30 sp|Q5RDM4|HSP74_PONAB Heat shock 70 kDa protein 4 OS=Pongo abeli... 131 2e-30 sp|Q2TFN9|HSP74_CANFA Heat shock 70 kDa protein 4 OS=Canis famil... 130 4e-30 sp|Q61316|HSP74_MOUSE Heat shock 70 kDa protein 4 OS=Mus musculu... 130 5e-30 sp|P34932|HSP74_HUMAN Heat shock 70 kDa protein 4 OS=Homo sapien... 129 8e-30 sp|P48722|HS74L_MOUSE Heat shock 70 kDa protein 4L OS=Mus muscul... 126 5e-29 sp|O95757|HS74L_HUMAN Heat shock 70 kDa protein 4L OS=Homo sapie... 125 2e-28 sp|Q94738|HSP97_STRFN 97 kDa heat shock protein OS=Strongylocent... 120 3e-27 sp|Q60446|HS105_CRIGR Heat shock protein 105 kDa OS=Cricetulus g... 119 6e-27 sp|Q92598|HS105_HUMAN Heat shock protein 105 kDa OS=Homo sapiens... 119 8e-27 sp|Q5R606|HS105_PONAB Heat shock protein 105 kDa OS=Pongo abelii... 119 1e-26 sp|Q61699|HS105_MOUSE Heat shock protein 105 kDa OS=Mus musculus... 118 2e-26 sp|Q66HA8|HS105_RAT Heat shock protein 105 kDa OS=Rattus norvegi... 116 5e-26 sp|Q06068|HSP97_STRPU 97 kDa heat shock protein OS=Strongylocent... 115 2e-25 sp|Q0IIM3|HS105_BOVIN Heat shock protein 105 kDa OS=Bos taurus G... 113 6e-25 sp|Q05036|YLA4_CAEEL Uncharacterized protein C30C11.4 OS=Caenorh... 110 5e-24 sp|Q6TMK3|HSP88_DICDI Heat shock protein 88 OS=Dictyostelium dis... 102 1e-21 sp|O74225|HSP88_NEUCR Heat shock protein Hsp88 OS=Neurospora cra... 89 1e-17 sp|Q60432|HYOU1_CRIGR Hypoxia up-regulated protein 1 OS=Cricetul... 82 1e-15 sp|Q9JKR6|HYOU1_MOUSE Hypoxia up-regulated protein 1 OS=Mus musc... 81 3e-15 sp|Q63617|HYOU1_RAT Hypoxia up-regulated protein 1 OS=Rattus nor... 80 4e-15 sp|Q9Y4L1|HYOU1_HUMAN Hypoxia up-regulated protein 1 OS=Homo sap... 80 4e-15 sp|Q96VB9|HSP7F_CANAL Heat shock protein homolog SSE1 OS=Candida... 80 4e-15 sp|Q875P5|HSP7F_SACKL Heat shock protein homolog SSE1 OS=Sacchar... 79 1e-14 sp|P32590|HSP79_YEAST Heat shock protein homolog SSE2 OS=Sacchar... 78 2e-14 sp|Q74ZJ0|HSP7F_ASHGO Heat shock protein homolog SSE1 OS=Ashbya ... 77 5e-14 sp|Q875V0|HSP7F_SACCA Heat shock protein homolog SSE1 OS=Sacchar... 77 6e-14 sp|P32589|HSP7F_YEAST Heat shock protein homolog SSE1 OS=Sacchar... 74 4e-13 sp|O59838|HSP7F_SCHPO Heat shock protein homolog pss1 OS=Schizos... 74 5e-13 sp|Q6FJI3|HSP7F_CANGA Heat shock protein homolog SSE1 OS=Candida... 69 1e-11
>sp|O88600|HSP74_RAT Heat shock 70 kDa protein 4 OS=Rattus norvegicus GN=Hspa4 PE=1 SV=1 Length = 840
Score = 131 bits (330), Expect = 2e-30 Identities = 64/161 (39%), Positives = 103/161 (63%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY MR+KL +Y ++ ++ +R + KL++TE+WLY++GED+ K VYV KLAEL Sbjct: 619 NAVEEYVYEMRDKLSGEYEKFVSEDDRNNFTLKLEDTENWLYEDGEDQPKQVYVDKLAEL 678
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFRE---AARSKDPKFDHIDAADKEKVIMEC 168 + LG PI+ RF+E E R E+L + + + + ++K+ +++H+DAAD KV Sbjct: 679 RTLGQPIKTRFQESEERPKLFEELGKQIQQYMKVISSFKNKEDQYEHLDAADMTKVEKST 738
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+A +W+ K Q+ +A+PV+ E++ K + L IC Sbjct: 739 NEAMEWMNSKLNLQNKQSLTADPVVKTKEIEAKIKELTNIC 779
>sp|Q5RDM4|HSP74_PONAB Heat shock 70 kDa protein 4 OS=Pongo abelii GN=HSPA4 PE=2 SV=1 Length = 840
Score = 131 bits (329), Expect = 2e-30 Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY MR+KL +Y ++ ++ +R KL++TE+WLY++GED+ K VYV KLAEL Sbjct: 619 NAVEEYVYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAEL 678
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFRE---AARSKDPKFDHIDAADKEKVIMEC 168 K LG PI+ RF+E E R E+L + + + + ++K+ ++DH+DAAD KV Sbjct: 679 KNLGQPIKIRFQESEERPKLFEELGKQIQQYMKIISSFKNKEDQYDHLDAADMTKVEKST 738
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+A +W+ K Q+ + +PV+ E++ K + L IC Sbjct: 739 NEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSIC 779
>sp|Q2TFN9|HSP74_CANFA Heat shock 70 kDa protein 4 OS=Canis familiaris GN=HSPA4 PE=1 SV=1 Length = 840
Score = 130 bits (327), Expect = 4e-30 Identities = 64/161 (39%), Positives = 101/161 (62%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY MR+KL +Y ++ ++ +R KL++TE+WLY++GED+ K VYV KLAEL Sbjct: 619 NAVEEYVYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAEL 678
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFRE---AARSKDPKFDHIDAADKEKVIMEC 168 K LG PI+ RF+E E R E+L + + + + ++K+ ++DH+DAAD KV Sbjct: 679 KNLGQPIKMRFQESEERPKLFEELGKQIQQYMKVISSFKNKEDQYDHLDAADMLKVEKST 738
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+A +W+ K Q+ + +PV+ E++ K + L +C Sbjct: 739 NEAMEWMNNKLNLQNKQSLTVDPVVKAKEIEAKIKELMSVC 779
>sp|Q61316|HSP74_MOUSE Heat shock 70 kDa protein 4 OS=Mus musculus GN=Hspa4 PE=1 SV=1 Length = 841
Score = 130 bits (326), Expect = 5e-30 Identities = 64/161 (39%), Positives = 101/161 (62%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY MR+KL +Y ++ ++ +R KL++TE+WLY++GED+ K VYV KLAEL Sbjct: 620 NAVEEYVYEMRDKLSGEYEKFVSEDDRNTFTLKLEDTENWLYEDGEDQPKQVYVDKLAEL 679
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFRE---AARSKDPKFDHIDAADKEKVIMEC 168 K LG PI+ RF+E E R E+L + + + + ++K+ +++H+DAAD KV Sbjct: 680 KSLGQPIKTRFQESEERPKLFEELGKQIQQYMKVISSFKNKEDQYEHLDAADVTKVEKST 739
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+A +W+ K Q+ + +PV+ E++ K + L IC Sbjct: 740 NEAMEWMNSKLNLQNKQSLTVDPVVKTKEIEAKIKELTSIC 780
>sp|P34932|HSP74_HUMAN Heat shock 70 kDa protein 4 OS=Homo sapiens GN=HSPA4 PE=1 SV=4 Length = 840
Score = 129 bits (324), Expect = 8e-30 Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY MR+KL +Y ++ ++ +R KL++TE+WLY++GED+ K VYV KLAEL Sbjct: 619 NAVEEYVYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAEL 678
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFRE---AARSKDPKFDHIDAADKEKVIMEC 168 K LG PI+ RF+E E R E+L + + + + ++K+ ++DH+DAAD KV Sbjct: 679 KNLGQPIKIRFQESEERPKLFEELGKQIQQYMKIISSFKNKEDQYDHLDAADMTKVEKST 738
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+A +W+ K Q+ + +PV+ E++ K + L C Sbjct: 739 NEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTC 779
>sp|P48722|HS74L_MOUSE Heat shock 70 kDa protein 4L OS=Mus musculus GN=Hspa4l PE=1 SV=2 Length = 838
Score = 126 bits (317), Expect = 5e-29 Identities = 65/161 (40%), Positives = 98/161 (60%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY+ R+KL Y ++ T + L+A L++TE+WLY+EGED+ K VYV +L EL Sbjct: 622 NAVEEYVYDFRDKLGTVYEKFITPEDMNKLSAMLEDTENWLYEEGEDQPKQVYVDRLQEL 681
Query: 338 KKLGDPIEERFKEEESRGPCLEQL---IYCLNSFREAARSKDPKFDHIDAADKEKVIMEC 168 KK G PI+ ++ E E R L L I + EA R+KD ++DH+D A+ E+V Sbjct: 682 KKYGQPIQMKYVEHEERPKALNDLGKKIQLVLKVIEAHRNKDERYDHLDPAEMERVEKYI 741
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 + + +WL K Q+ L + +PV+ +E+ K++ LD C Sbjct: 742 SDSMNWLNSKMNAQNKLSLTQDPVVKVSEIVTKSKELDNFC 782
>sp|O95757|HS74L_HUMAN Heat shock 70 kDa protein 4L OS=Homo sapiens GN=HSPA4L PE=1 SV=2 Length = 839
Score = 125 bits (313), Expect = 2e-28 Identities = 65/161 (40%), Positives = 96/161 (59%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY+ R++L Y ++ T + L+A L++TE+WLY++GED+ K VYV KL EL Sbjct: 622 NAVEEYVYDFRDRLGTVYEKFITPEDLSKLSAVLEDTENWLYEDGEDQPKQVYVDKLQEL 681
Query: 338 KKLGDPIEERFKEEESRGPCLEQL---IYCLNSFREAARSKDPKFDHIDAADKEKVIMEC 168 KK G PI+ ++ E E R L L I + EA R+KD ++DH+D + EKV Sbjct: 682 KKYGQPIQMKYMEHEERPKALNDLGKKIQLVMKVIEAYRNKDERYDHLDPTEMEKVEKCI 741
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 + A WL K Q+ L + +PV+ +E+ K++ LD C Sbjct: 742 SDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFC 782
>sp|Q94738|HSP97_STRFN 97 kDa heat shock protein OS=Strongylocentrotus franciscanus GN=HSP110 PE=2 SV=1 Length = 886
Score = 120 bits (302), Expect = 3e-27 Identities = 61/161 (37%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY+MR KL +K+ +Y ++ ER + L+ETE+WLY++GEDETK VY AK+ L Sbjct: 653 NAVEEYVYDMREKLCDKFEQYVSEKERGSFSKLLEETENWLYEDGEDETKSVYQAKITSL 712
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFREAA---RSKDPKFDHIDAADKEKVIMEC 168 KK+GDPIE R+KE+ R E+L L + + D K+ HI+ + KV Sbjct: 713 KKIGDPIENRYKEKHERPVAFEELGKALMLYGKTLDLYSQGDEKYSHIEKDEMAKVEKCL 772
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 + E W K Q+ +PV+ +++ + +++ IC Sbjct: 773 KEKEAWRDSKTSAQNQKAAYQDPVVTAQQIRSEIQSMKFIC 813
>sp|Q60446|HS105_CRIGR Heat shock protein 105 kDa OS=Cricetulus griseus GN=HSPH1 PE=2 SV=1 Length = 858
Score = 119 bits (299), Expect = 6e-27 Identities = 62/161 (38%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE VY R+KL Y ++ E E L ETEDWLY+EGED+ K Y+ KL EL Sbjct: 637 NAVEECVYEFRDKLCGPYEKFICQQEHEKFLRLLTETEDWLYEEGEDQAKQAYIDKLEEL 696
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFREAA---RSKDPKFDHIDAADKEKVIMEC 168 K+G+P++ RF+E E R LE+L L + + A RSKD K++HID ++ +KV Sbjct: 697 MKMGNPVKVRFQEAEERPKVLEELGQRLQHYAKIAADFRSKDEKYNHIDESEMKKVEKSV 756
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+ +W+ Q +PV+ E++ K + L+ +C Sbjct: 757 NEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVC 797
>sp|Q92598|HS105_HUMAN Heat shock protein 105 kDa OS=Homo sapiens GN=HSPH1 PE=1 SV=1 Length = 858
Score = 119 bits (298), Expect = 8e-27 Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = -3
Query: 518 NAVEAYVYNMRNKLYEKYHEYATDPEREDLAAKLQETEDWLYDEGEDETKGVYVAKLAEL 339 NAVE YVY R+KL Y ++ + + ++ L ETEDWLY+EGED+ K YV KL EL Sbjct: 636 NAVEEYVYEFRDKLCGPYEKFICEQDHQNFLRLLTETEDWLYEEGEDQAKQAYVDKLEEL 695
Query: 338 KKLGDPIEERFKEEESRGPCLEQLIYCLNSFREAA---RSKDPKFDHIDAADKEKVIMEC 168 K+G P++ RF+E E R E+L L + + A R+KD K++HID ++ +KV Sbjct: 696 MKIGTPVKVRFQEAEERPKMFEELGQRLQHYAKIAADFRNKDEKYNHIDESEMKKVEKSV 755
Query: 167 NKAEDWLREKKQQQDHLPRSANPVLLCAEVKKKTETLDRIC 45 N+ +W+ Q +PV+ E+K K + L+ C Sbjct: 756 NEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTC 796
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDD3 |
Definition |
tr|A9SDD3|A9SDD3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
158 |
Score (bit) |
250.0 |
E-value |
3.0e-65 |
Report |
|