BP918102 |
Clone id |
YMU001_000109_F03 |
Library |
YMU01 |
Length |
556 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000109_F03. |
Accession |
BP918102 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGAGTTTCAAAGTCAATTGCCCTTCACCAAAAGTTGATACAACTATCAAACCACCATGTA TGACCCACCAAAATCTTCTCCATGTCCCATGACTGCCGAAGAAACACATACAGAAATATT GCTCACCTGCTGGAATAATGCAGGGGTAAATCTTTTCTTGGAGCTCAAAAAAGAAACAGG GTTTAAATGAATGTTTCATTGCTTTTCACATTCAGTTTTCAGGCAAGTTGAAGAACAGAG AAAAGCTGGTGCAGAGGCCCGAGCTAAGCAGCAAGCTGAAGAGGGACAATTCGTATTCAA GTTGCCGCTATCTGTCACTGACTCCACAGATACACCTCACCACTTGAAGAACAGCCTGCC AATAATCCAGGCCTATATGGATGCACGGCTAGCCGAGAAGGGATTGATTTCATCAACGGG CTGGTCAACCATTCACACTCTATTTCAAATTTTGCGGAAATTATGTCAATGCTCCTCTTG ATGTTGCCCACAAACACAAAGCGGTCATCCCATCCCCATATAGCCCTGATCGATGACACT CCTCTGAGATGCATGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5KBC0 |
Definition |
sp|Q5KBC0|YD156_CRYNE WD repeat-containing protein CNI03070/CNBH2930 OS=Cryptococcus neoformans |
Align length |
78 |
Score (bit) |
39.7 |
E-value |
0.01 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QS01 |
Definition |
tr|A7QS01|A7QS01_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
74 |
Score (bit) |
86.3 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918102|Adiantum capillus-veneris mRNA, clone: YMU001_000109_F03. (556 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QS01|A7QS01_VITVI Chromosome undetermined scaffold_155, who... 86 1e-15 tr|Q9SAI7|Q9SAI7_ARATH F23A5.6 protein OS=Arabidopsis thaliana G... 83 1e-14 tr|Q6YS10|Q6YS10_ORYSJ Os08g0282500 protein OS=Oryza sativa subs... 70 1e-10 tr|A3BRI6|A3BRI6_ORYSJ Putative uncharacterized protein OS=Oryza... 70 1e-10 tr|A2YTG5|A2YTG5_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10 tr|A3BRJ0|A3BRJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|A2YTH1|A2YTH1_ORYSI Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|Q6YZ25|Q6YZ25_ORYSJ Transducin / WD-40 repeat protein-like OS... 65 2e-09 tr|Q0J6Q2|Q0J6Q2_ORYSJ Os08g0285200 protein (Fragment) OS=Oryza ... 65 2e-09 tr|B7F4I5|B7F4I5_ORYSJ cDNA clone:001-115-E05, full insert seque... 65 2e-09 tr|A7RGG5|A7RGG5_NEMVE Predicted protein OS=Nematostella vectens... 40 0.11 tr|A8I388|A8I388_CHLRE Predicted protein OS=Chlamydomonas reinha... 38 0.32 tr|B6M0H1|B6M0H1_BRAFL Putative uncharacterized protein OS=Branc... 36 1.2 tr|B7RTR6|B7RTR6_9GAMM Acyl-CoA dehydrogenase, C-terminal domain... 35 2.7 tr|Q7F9P3|Q7F9P3_ORYSJ OSJNBa0049H08.6 protein OS=Oryza sativa s... 35 3.6 tr|Q01KQ1|Q01KQ1_ORYSA OSIGBa0110B10.7 protein (OSIGBa0115J08.1 ... 35 3.6 tr|A5DJX5|A5DJX5_PICGU Putative uncharacterized protein OS=Pichi... 34 6.0 tr|A7U4W3|A7U4W3_9CHLO Putative uncharacterized protein OS=Dunal... 34 6.1 tr|B0JDY3|B0JDY3_TRIMA NADH-ubiquinone oxidoreductase chain 5 OS... 34 6.1 tr|Q4S9U9|Q4S9U9_TETNG Chromosome undetermined SCAF14694, whole ... 33 7.8
>tr|A7QS01|A7QS01_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005613001 PE=4 SV=1 Length = 431
Score = 86.3 bits (212), Expect = 1e-15 Identities = 36/74 (48%), Positives = 50/74 (67%) Frame = -3
Query: 545 RGVSSIRAIWGWDDRFVFVGNIKRSIDIISAKFEIECEWLTSPLMKSIPSRLAVHPYRPG 366 R +SS RAIWGWDD ++F+GN+KR +DIIS L S M +IP R + HPY+ G Sbjct: 355 RWISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVG 414
Query: 365 LLAGCSSSGEVYLW 324 +LAG + G++Y+W Sbjct: 415 MLAGATGGGQIYMW 428
>tr|Q9SAI7|Q9SAI7_ARATH F23A5.6 protein OS=Arabidopsis thaliana GN=At1g80710 PE=4 SV=1 Length = 516
Score = 82.8 bits (203), Expect = 1e-14 Identities = 32/75 (42%), Positives = 52/75 (69%) Frame = -3
Query: 545 RGVSSIRAIWGWDDRFVFVGNIKRSIDIISAKFEIECEWLTSPLMKSIPSRLAVHPYRPG 366 R +S +A+WGWDD +++VGN+ + ID+I+ K + L +PL ++IP R+ HPY G Sbjct: 440 RWISKFKAVWGWDDSYIYVGNLSKKIDVINPKLKRTVMELHNPLQRAIPCRIHCHPYNVG 499
Query: 365 LLAGCSSSGEVYLWS 321 LAG ++ G+VY+W+ Sbjct: 500 TLAGSTAGGQVYVWT 514
>tr|Q6YS10|Q6YS10_ORYSJ Os08g0282500 protein OS=Oryza sativa subsp. japonica GN=B1446H11.26 PE=2 SV=1 Length = 457
Score = 69.7 bits (169), Expect = 1e-10 Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 6/82 (7%) Frame = -3
Query: 545 RGVSSIRAIWGWDDRFVFVGNIKRSIDII------SAKFEIECEWLTSPLMKSIPSRLAV 384 R +S+ +AIWGW+D +F+GN+ R+IDII S+ + L S M +IP R + Sbjct: 375 RWLSTFKAIWGWNDTDLFIGNMARAIDIILVDLNGSSLLAMNNARLESEHMTAIPGRFSA 434
Query: 383 HPYRPGLLAGCSSSGEVYLWSQ 318 HPY+ G LA SS G+V+LW++ Sbjct: 435 HPYKVGHLACASSGGKVFLWTR 456
>tr|A3BRI6|A3BRI6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025658 PE=4 SV=1 Length = 348
Score = 69.7 bits (169), Expect = 1e-10 Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 6/82 (7%) Frame = -3
Query: 545 RGVSSIRAIWGWDDRFVFVGNIKRSIDII------SAKFEIECEWLTSPLMKSIPSRLAV 384 R +S+ +AIWGW+D +F+GN+ R+IDII S+ + L S M +IP R + Sbjct: 266 RWLSTFKAIWGWNDTDLFIGNMARAIDIILVDLNGSSLLAMNNARLESEHMTAIPGRFSA 325
Query: 383 HPYRPGLLAGCSSSGEVYLWSQ 318 HPY+ G LA SS G+V+LW++ Sbjct: 326 HPYKVGHLACASSGGKVFLWTR 347
>tr|A2YTG5|A2YTG5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28605 PE=4 SV=1 Length = 573
Score = 68.9 bits (167), Expect = 2e-10 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 6/82 (7%) Frame = -3
Query: 545 RGVSSIRAIWGWDDRFVFVGNIKRSIDII------SAKFEIECEWLTSPLMKSIPSRLAV 384 R +S+ +AIWGW+D +F+GN+ R+IDII S+ + L S M IP R + Sbjct: 491 RWLSTFKAIWGWNDTDLFIGNMARAIDIILVDLNGSSLLAMNNARLESEHMTPIPGRFSA 550
Query: 383 HPYRPGLLAGCSSSGEVYLWSQ 318 HPY+ G LA SS G+V+LW++ Sbjct: 551 HPYKVGHLACASSGGKVFLWTR 572
Score = 63.2 bits (152), Expect = 9e-09 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 6/79 (7%) Frame = -3
Query: 545 RGVSSIRAIWGWDDRFVFVGNIKRSIDII------SAKFEIECEWLTSPLMKSIPSRLAV 384 R +S+ +AIWGW+D +F+GN+ R+IDII S+ + L S M +IP R + Sbjct: 375 RWLSTFKAIWGWNDTDLFIGNMARAIDIILVDLNGSSLLAMNNARLESEHMTAIPGRFSA 434
Query: 383 HPYRPGLLAGCSSSGEVYL 327 HPY+ G LA SS G+V L Sbjct: 435 HPYKVGHLACASSGGKVLL 453
>tr|A3BRJ0|A3BRJ0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025662 PE=4 SV=1 Length = 416
Score = 65.9 bits (159), Expect = 1e-09 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Frame = -3
Query: 539 VSSIRAIWGWDDRFVFVGNIKRSIDIISAKFE------IECEWLTSPLMKSIPSRLAVHP 378 V++ RAIWGW+D +F+GN R+ID+IS L S M SIP R + HP Sbjct: 336 VATTRAIWGWNDMDLFIGNATRAIDVISVDLNDSSISTTNNACLKSEHMVSIPYRFSAHP 395
Query: 377 YRPGLLAGCSSSGEVYLWSQ 318 + G LA SSSG+V+LW++ Sbjct: 396 CKVGHLACSSSSGKVFLWTR 415
>tr|A2YTH1|A2YTH1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28611 PE=4 SV=1 Length = 416
Score = 65.9 bits (159), Expect = 1e-09 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Frame = -3
Query: 539 VSSIRAIWGWDDRFVFVGNIKRSIDIISAKFE------IECEWLTSPLMKSIPSRLAVHP 378 V++ RAIWGW+D +F+GN R+ID+IS L S M SIP R + HP Sbjct: 336 VATTRAIWGWNDMDLFIGNATRAIDVISVDLNDSSISTTNNACLKSEHMVSIPYRFSAHP 395
Query: 377 YRPGLLAGCSSSGEVYLWSQ 318 + G LA SSSG+V+LW++ Sbjct: 396 CKVGHLACSSSSGKVFLWTR 415
>tr|Q6YZ25|Q6YZ25_ORYSJ Transducin / WD-40 repeat protein-like OS=Oryza sativa subsp. japonica GN=P0436B05.25 PE=4 SV=1 Length = 524
Score = 65.1 bits (157), Expect = 2e-09 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Frame = -3
Query: 539 VSSIRAIWGWDDRFVFVGNIKRSIDIISAKFE------IECEWLTSPLMKSIPSRLAVHP 378 +S+ +AIWGW+D +F+GN R+ID+IS L S M SIP R + HP Sbjct: 444 LSTFKAIWGWNDMDLFIGNATRAIDVISVDLNDSSISTTNNACLKSEHMVSIPYRFSAHP 503
Query: 377 YRPGLLAGCSSSGEVYLWSQ 318 + G LA SSSG+V+LW++ Sbjct: 504 CKVGHLACSSSSGKVFLWTR 523
>tr|Q0J6Q2|Q0J6Q2_ORYSJ Os08g0285200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os08g0285200 PE=4 SV=1 Length = 488
Score = 65.1 bits (157), Expect = 2e-09 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Frame = -3
Query: 539 VSSIRAIWGWDDRFVFVGNIKRSIDIISAKFE------IECEWLTSPLMKSIPSRLAVHP 378 +S+ +AIWGW+D +F+GN R+ID+IS L S M SIP R + HP Sbjct: 408 LSTFKAIWGWNDMDLFIGNATRAIDVISVDLNDSSISTTNNACLKSEHMVSIPYRFSAHP 467
Query: 377 YRPGLLAGCSSSGEVYLWSQ 318 + G LA SSSG+V+LW++ Sbjct: 468 CKVGHLACSSSSGKVFLWTR 487
>tr|B7F4I5|B7F4I5_ORYSJ cDNA clone:001-115-E05, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 449
Score = 65.1 bits (157), Expect = 2e-09 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Frame = -3
Query: 539 VSSIRAIWGWDDRFVFVGNIKRSIDIISAKFE------IECEWLTSPLMKSIPSRLAVHP 378 +S+ +AIWGW+D +F+GN R+ID+IS L S M SIP R + HP Sbjct: 369 LSTFKAIWGWNDMDLFIGNATRAIDVISVDLNDSSISTTNNACLKSEHMVSIPYRFSAHP 428
Query: 377 YRPGLLAGCSSSGEVYLWSQ 318 + G LA SSSG+V+LW++ Sbjct: 429 CKVGHLACSSSSGKVFLWTR 448
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