BP918110
Clone id YMU001_000109_F11
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATGAAAATTTGGATTCAGTGAGACGGACACAATGAACATGGACAGGTCGAGACGGGCTG
TCCCGTATAAGCTCATGGGAAGAGGGGCTCTGCATCCTCGCACAACGCAAAAACGAAGGC
CAGAATATACAAGGCCACATGGGTCATTTTAAGATCTTTGTCCCCCATACAAAACCAGAA
AAAGTACTGCATTTAGATTACAAAAGAATTACAACTTCATTCACCACAGACAGAAAACCT
TTCTAAAACGGCAATGTCGTCCATGAGTATCGCCAGCACTTCACCTTGGCAATGACTAGA
CCTCGTCAAATGTTTGCACACCAGTTCAAAACGAAAACTTCAAGCAACCATCCAGCTGCA
TAGTGGGGCCACAACAAATACTTCAAAGTTCAAAATGCTTCAAACTTTGAATCTGCTTCA
CTGGCTTGTGGCCACTAGATCAGTACCATTAGTAACTGACTCTCCATCTTTCGAAAGAAA
AAGAAGATATCCACTGCTTAACAACCCATTTGT
■■Homology search results ■■ -
sp_hit_id Q8R4F1
Definition sp|Q8R4F1|NTNG2_MOUSE Netrin-G2 OS=Mus musculus
Align length 37
Score (bit) 32.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918110|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_F11.
(513 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8R4F1|NTNG2_MOUSE Netrin-G2 OS=Mus musculus GN=Ntng2 PE=1 SV=1 32 1.8
sp|Q96CW9|NTNG2_HUMAN Netrin-G2 OS=Homo sapiens GN=NTNG2 PE=2 SV=1 32 1.8
sp|Q8R4G0|NTNG1_MOUSE Netrin-G1 OS=Mus musculus GN=Ntng1 PE=1 SV=2 32 1.8
sp|Q9Y2I2|NTNG1_HUMAN Netrin-G1 OS=Homo sapiens GN=NTNG1 PE=1 SV=3 32 1.8
sp|O77438|FRIZ3_DROME Frizzled-3 OS=Drosophila melanogaster GN=f... 30 8.5

>sp|Q8R4F1|NTNG2_MOUSE Netrin-G2 OS=Mus musculus GN=Ntng2 PE=1 SV=1
Length = 589

Score = 32.0 bits (71), Expect = 1.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1

Query: 318 CKHLTRSSHCQGEVLAILMDDIAVLERFSVCGE*SCN 208
CKH TR HCQ L + A L+ +VC E +CN
Sbjct: 436 CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCN 472


>sp|Q96CW9|NTNG2_HUMAN Netrin-G2 OS=Homo sapiens GN=NTNG2 PE=2 SV=1
Length = 530

Score = 32.0 bits (71), Expect = 1.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1

Query: 318 CKHLTRSSHCQGEVLAILMDDIAVLERFSVCGE*SCN 208
CKH TR HCQ L + A L+ +VC E +CN
Sbjct: 376 CKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCN 412


>sp|Q8R4G0|NTNG1_MOUSE Netrin-G1 OS=Mus musculus GN=Ntng1 PE=1 SV=2
Length = 539

Score = 32.0 bits (71), Expect = 1.8
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -1

Query: 399 SILNFEVFVVAPLCSWMVA*SFRFELVCKHLTRSSHCQGEVLAILMDDIAVLERFSVCGE 220
SI N E F + CS++ + + CKH TR HC+ L + A L+ +VC E
Sbjct: 360 SIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIE 419

Query: 219 *SCN 208
CN
Sbjct: 420 CYCN 423


>sp|Q9Y2I2|NTNG1_HUMAN Netrin-G1 OS=Homo sapiens GN=NTNG1 PE=1 SV=3
Length = 539

Score = 32.0 bits (71), Expect = 1.8
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -1

Query: 399 SILNFEVFVVAPLCSWMVA*SFRFELVCKHLTRSSHCQGEVLAILMDDIAVLERFSVCGE 220
SI N E F + CS++ + + CKH TR HC+ L + A L+ +VC E
Sbjct: 360 SIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIE 419

Query: 219 *SCN 208
CN
Sbjct: 420 CYCN 423


>sp|O77438|FRIZ3_DROME Frizzled-3 OS=Drosophila melanogaster GN=fz3
PE=2 SV=2
Length = 581

Score = 29.6 bits (65), Expect = 8.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2

Query: 122 WPSFLRCARMQSPSSHELIRDSP 54
WPSFL C + P HEL P
Sbjct: 135 WPSFLNCDGLPQPEKHELCMQIP 157


tr_hit_id Q4RFZ0
Definition tr|Q4RFZ0|Q4RFZ0_TETNG Chromosome undetermined SCAF15108, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 39
Score (bit) 33.9
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918110|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_F11.
(513 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4RFZ0|Q4RFZ0_TETNG Chromosome undetermined SCAF15108, whole ... 34 4.9
tr|A6NMX7|A6NMX7_HUMAN Putative uncharacterized protein NTNG2 OS... 33 8.3

>tr|Q4RFZ0|Q4RFZ0_TETNG Chromosome undetermined SCAF15108, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00035109001 PE=4 SV=1
Length = 767

Score = 33.9 bits (76), Expect = 4.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1

Query: 318 CKHLTRSSHCQGEVLAILMDDIAVLERFSVCGE*SCNSF 202
CKH TR HCQ L + A L+ +VC E +CN F
Sbjct: 546 CKHNTRGQHCQQCKLGYYRNASAELDDENVCIECNCNPF 584


>tr|A6NMX7|A6NMX7_HUMAN Putative uncharacterized protein NTNG2
OS=Homo sapiens GN=NTNG2 PE=4 SV=2
Length = 536

Score = 33.1 bits (74), Expect = 8.3
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = -1

Query: 450 NGTDLVATSQ*SRFKV*SILNFEVFVVAPLCSWMVA*SFRFELVCKHLTRSSHCQGEVLA 271
+G+ T+ F + L+ E + + CS++ + + CKH TR HCQ L
Sbjct: 338 HGSPNACTAPSGTFSKDAFLHCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLG 397

Query: 270 ILMDDIAVLERFSVCGE*SCN 208
+ A L+ +VC E +CN
Sbjct: 398 YYRNGSAELDDENVCIECNCN 418