BP918111 |
Clone id |
YMU001_000109_F12 |
Library |
YMU01 |
Length |
510 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000109_F12. |
Accession |
BP918111 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2561Contig1 |
Sequence |
AGATCTGCGAGACCCGTCATTTCTTTGTGTGAATGAAAGATTGTGGCGACGTTTACCAGT AGTTATGAGAAAATGTTTTTCGGCAATTGCAAAGATACGCAGCTGTCTACCTCGTTGGTA CAGGGCCAGTATTAAAAGAGGCAATCTCAAGATCTTTGGCTGATTTAGATTCTGCATTGA GAAAAAACTTCAATAAAAAGGTTCACCAAAGTGGTACAACAGCAGTTGTGGTGCTGAAGG TGGACAGTCATTTACTTGTTGCAAATATTGGCGATTCTCAAGCCTTCATATGTTCGTCGT TTATATCAGCAGACTTTTTTCAATCTGGAATTATGGAAGATGCACCGGAGATGAATATAT ATCTCTCTAATGAAGCTGCTGGAAGATTTGTACCTTCAATATTAACCAAAGAGCTTACAG TTGCCCATCATCCTGACAGAGCGGATGAGAAGTTTCGTATTGAAGCTGCAGGTGGTTTTG TATCGACATGGGGAGGAGTGGCAAGAGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3CCP9 |
Definition |
sp|A3CCP9|P2C76_ORYSJ Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica |
Align length |
132 |
Score (bit) |
90.9 |
E-value |
3.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PUH2 |
Definition |
tr|A7PUH2|A7PUH2_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
143 |
Score (bit) |
95.9 |
E-value |
1.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918111|Adiantum capillus-veneris mRNA, clone: YMU001_000109_F12. (510 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PUH2|A7PUH2_VITVI Chromosome chr7 scaffold_31, whole genome... 96 1e-18 tr|Q9M1V8|Q9M1V8_ARATH Putative uncharacterized protein F16M2_17... 88 3e-16 tr|Q9M1V6|Q9M1V6_ARATH Putative uncharacterized protein F16M2_19... 87 4e-16 tr|Q93YS2|Q93YS2_ARATH Putative uncharacterized protein At3g6334... 87 4e-16 tr|A9TGG3|A9TGG3_PHYPA Predicted protein OS=Physcomitrella paten... 54 6e-06 tr|B8BL95|B8BL95_ORYSI Putative uncharacterized protein OS=Oryza... 53 1e-05 tr|A9PIA5|A9PIA5_POPTR Putative uncharacterized protein OS=Popul... 52 2e-05 tr|A7QFG6|A7QFG6_VITVI Chromosome chr8 scaffold_88, whole genome... 51 3e-05 tr|A7NSN8|A7NSN8_VITVI Chromosome chr18 scaffold_1, whole genome... 51 3e-05 tr|A5C5W6|A5C5W6_VITVI Putative uncharacterized protein OS=Vitis... 51 3e-05 tr|A5BF43|A5BF43_VITVI Putative uncharacterized protein OS=Vitis... 51 3e-05 tr|B5KVP4|B5KVP4_PRUPE Protein phosphatase 2C (Fragment) OS=Prun... 49 1e-04 tr|B5KVN8|B5KVN8_PRUDO Protein phosphatase 2C (Fragment) OS=Prun... 49 1e-04 tr|A9RMR0|A9RMR0_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|Q9FLI3|Q9FLI3_ARATH Protein phosphatase-2C; PP2C-like protein... 48 3e-04 tr|B8AW54|B8AW54_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|B6TY17|B6TY17_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 48 3e-04 tr|B6TN97|B6TN97_MAIZE Protein phosphatase 2C ABI2 OS=Zea mays P... 48 3e-04 tr|B4FVU1|B4FVU1_MAIZE Putative uncharacterized protein OS=Zea m... 48 3e-04 tr|A4Q9E3|A4Q9E3_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9D5|A4Q9D5_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9D3|A4Q9D3_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9D1|A4Q9D1_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9D0|A4Q9D0_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9C6|A4Q9C6_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9B9|A4Q9B9_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9B7|A4Q9B7_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9B5|A4Q9B5_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9B3|A4Q9B3_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04 tr|A4Q9B2|A4Q9B2_POPTN Abscisic insensitive 1B OS=Populus tremul... 48 3e-04
>tr|A7PUH2|A7PUH2_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023800001 PE=4 SV=1 Length = 597
Score = 95.9 bits (237), Expect = 1e-18 Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 16/143 (11%) Frame = +3
Query: 129 VLKEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFIS 308 +LKE++ R++ D+D K ++ SG+TA V+L D +LVAN+GDS+A +CS Sbjct: 195 ILKESLLRAIHDIDKTFSKEASRNNLDSGSTATVILIADGQILVANVGDSKALLCS---- 250
Query: 309 ADFFQSGIMEDAPEMNIYLSNEAAGRFVP----------------SILTKELTVAHHPDR 440 + FQS +Y +G P KELT HHPDR Sbjct: 251 -EKFQSPAEAKVTLSRLYRQRRRSGAISPLKDYENSKFLSSNGLAHFSVKELTRDHHPDR 309
Query: 441 ADEKFRIEAAGGFVSTWGGVARV 509 DEK R+E+AGG+V WGGVARV Sbjct: 310 DDEKSRVESAGGYVYEWGGVARV 332
>tr|Q9M1V8|Q9M1V8_ARATH Putative uncharacterized protein F16M2_170 OS=Arabidopsis thaliana GN=F16M2_170 PE=4 SV=1 Length = 423
Score = 87.8 bits (216), Expect = 3e-16 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 15/142 (10%) Frame = +3
Query: 129 VLKEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFIS 308 +LKEA+ R++ D+D+ K + + SG+TA + L D LLVA+IGDS+A +CS Sbjct: 140 ILKEALLRAIYDIDATFTKEASTRKLDSGSTATIALIADGQLLVASIGDSKALLCS---- 195
Query: 309 ADFFQSGIMEDAPEMNIYLSNEAAGRFVPS---------------ILTKELTVAHHPDRA 443 + +++ A + +Y + PS + KELT HHPDR Sbjct: 196 -ERYETPEEAKATLIKLYRERKRNQDSSPSRFSDLKLEHRTGLMRFIAKELTKDHHPDRE 254
Query: 444 DEKFRIEAAGGFVSTWGGVARV 509 DE R++AAGG+V+ W GV RV Sbjct: 255 DEMLRVKAAGGYVTKWAGVPRV 276
>tr|Q9M1V6|Q9M1V6_ARATH Putative uncharacterized protein F16M2_190 OS=Arabidopsis thaliana GN=F16M2_190 PE=4 SV=1 Length = 816
Score = 87.4 bits (215), Expect = 4e-16 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 17/144 (11%) Frame = +3
Query: 129 VLKEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFIS 308 ++KEA+ R++ D+D K + + SG+TA + L D L+VA+IGDS+A +CS Sbjct: 179 IMKEALLRAIHDIDVTFTKEASNRKLNSGSTATIALIADGQLMVASIGDSKALLCSEKFE 238
Query: 309 ADFFQSGIMEDAPEMNIYLSNEAA-----------------GRFVPSILTKELTVAHHPD 437 +E+A + L E G + + KELT HHP+ Sbjct: 239 T-------LEEARATLVKLYRERRRNRGSSPSRFSDFKLEHGNGLLRFIAKELTKDHHPN 291
Query: 438 RADEKFRIEAAGGFVSTWGGVARV 509 R DEK R+EAAGG+V+ W GV RV Sbjct: 292 REDEKIRVEAAGGYVTEWAGVPRV 315
>tr|Q93YS2|Q93YS2_ARATH Putative uncharacterized protein At3g63340 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=1 Length = 528
Score = 87.4 bits (215), Expect = 4e-16 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 17/144 (11%) Frame = +3
Query: 129 VLKEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFIS 308 ++KEA+ R++ D+D K + + SG+TA + L D L+VA+IGDS+A +CS Sbjct: 205 IMKEALLRAIHDIDVTFTKEASNRKLNSGSTATIALIADGQLMVASIGDSKALLCSEKFE 264
Query: 309 ADFFQSGIMEDAPEMNIYLSNEAA-----------------GRFVPSILTKELTVAHHPD 437 +E+A + L E G + + KELT HHP+ Sbjct: 265 T-------LEEARATLVKLYRERRRNRGSSPSRFSDFKLEHGNGLLRFIAKELTKDHHPN 317
Query: 438 RADEKFRIEAAGGFVSTWGGVARV 509 R DEK R+EAAGG+V+ W GV RV Sbjct: 318 REDEKIRVEAAGGYVTEWAGVPRV 341
>tr|A9TGG3|A9TGG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_92442 PE=3 SV=1 Length = 277
Score = 53.5 bits (127), Expect = 6e-06 Identities = 40/123 (32%), Positives = 54/123 (43%) Frame = +3
Query: 141 AISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFISADFF 320 AI+ + D K N + +G+TA + V LLVAN+GDS+A IC Sbjct: 95 AIAETFKKTDQEYLKADNNQHRDAGSTASTAILVGDRLLVANVGDSRAVIC--------- 145
Query: 321 QSGIMEDAPEMNIYLSNEAAGRFVPSILTKELTVAHHPDRADEKFRIEAAGGFVSTWGGV 500 AGR + L++ H P+R+DE+ RIE AGG V W G Sbjct: 146 ------------------IAGRAI------ALSIDHKPNRSDERQRIEKAGGVV-MWSGT 180
Query: 501 ARV 509 RV Sbjct: 181 WRV 183
>tr|B8BL95|B8BL95_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36621 PE=4 SV=1 Length = 1133
Score = 52.8 bits (125), Expect = 1e-05 Identities = 24/39 (61%), Positives = 27/39 (69%) Frame = +3
Query: 393 PSILTKELTVAHHPDRADEKFRIEAAGGFVSTWGGVARV 509 P KELT HHPDR DE+ R+EAAGG+V W GV RV Sbjct: 267 PFYNVKELTKDHHPDREDERSRVEAAGGYVLEWAGVHRV 305
>tr|A9PIA5|A9PIA5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 303
Score = 51.6 bits (122), Expect = 2e-05 Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 2/107 (1%) Frame = +3
Query: 195 KKVHQ--SGTTAVVVLKVDSHLLVANIGDSQAFICSSFISADFFQSGIMEDAPEMNIYLS 368 +K HQ +G+TA + + LLVAN+GDS+ C Sbjct: 112 EKAHQKDAGSTASTAVLLGDRLLVANVGDSRVVACR------------------------ 147
Query: 369 NEAAGRFVPSILTKELTVAHHPDRADEKFRIEAAGGFVSTWGGVARV 509 AG +P L++ H PDR+DE+ RIE AGGFV W G RV Sbjct: 148 ---AGSAIP------LSIDHKPDRSDERQRIEEAGGFV-VWAGTWRV 184
>tr|A7QFG6|A7QFG6_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037415001 PE=4 SV=1 Length = 395
Score = 51.2 bits (121), Expect = 3e-05 Identities = 23/57 (40%), Positives = 37/57 (64%) Frame = +3
Query: 126 PVLKEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICS 296 P+ K ++ +S ++D L N SGTTAV V+K + HL++AN+GDS+A +C+ Sbjct: 98 PLWKASLIKSFEEMDEELGSNSTFDSFCSGTTAVTVIKQEDHLIIANLGDSRAVLCT 154
>tr|A7NSN8|A7NSN8_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014338001 PE=3 SV=1 Length = 276
Score = 51.2 bits (121), Expect = 3e-05 Identities = 39/125 (31%), Positives = 51/125 (40%) Frame = +3
Query: 135 KEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFISAD 314 K AI+ D+ + +G+TA + V LLVAN+GDS+ C Sbjct: 94 KSAIAEVFRKTDADYLNEEKGQARDAGSTASTAVLVGDRLLVANVGDSRVVACR------ 147
Query: 315 FFQSGIMEDAPEMNIYLSNEAAGRFVPSILTKELTVAHHPDRADEKFRIEAAGGFVSTWG 494 AG +P L+ H PDR+DE+ RIE AGGFV W Sbjct: 148 ---------------------AGSAIP------LSTDHKPDRSDERQRIEDAGGFV-IWA 179
Query: 495 GVARV 509 G RV Sbjct: 180 GTWRV 184
>tr|A5C5W6|A5C5W6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033291 PE=3 SV=1 Length = 224
Score = 51.2 bits (121), Expect = 3e-05 Identities = 39/125 (31%), Positives = 51/125 (40%) Frame = +3
Query: 135 KEAISRSLADLDSALRKNFNKKVHQSGTTAVVVLKVDSHLLVANIGDSQAFICSSFISAD 314 K AI+ D+ + +G+TA + V LLVAN+GDS+ C Sbjct: 71 KSAIAEVFRKTDADYLNEEKGQARDAGSTASTAVLVGDRLLVANVGDSRVVACR------ 124
Query: 315 FFQSGIMEDAPEMNIYLSNEAAGRFVPSILTKELTVAHHPDRADEKFRIEAAGGFVSTWG 494 AG +P L+ H PDR+DE+ RIE AGGFV W Sbjct: 125 ---------------------AGSAIP------LSTDHKPDRSDERQRIEDAGGFV-IWA 156
Query: 495 GVARV 509 G RV Sbjct: 157 GTWRV 161
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