BP918117
Clone id YMU001_000109_G06
Library
Length 422
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000109_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCAGCTTTTAAAAGCTGCACTTCCTCTTGCAGTATAAGGCTCGACAGGTTGCTGCTCCA
GTATGGCCTCCGACTCCTCATAAGCTCTAATATATTGATCATATAGATCAACATGTGGCC
TGACTGAGCTGGTTCCGACTTTACTGGGGTCTGGCACCCACATGTTCTTCGAAGTCCCCC
TATTAAAGCTCTTTCTGCTCTAAACTACTCCACCAGCCTTTCCATTCTTGTGGCTTTTTG
ACTTTTGGTTTGCTTGCGGATCGGCCTTCTTCTTCACTTTCTTCTTGAGCGGCTCGTCCA
CGGACTCCTCAGGTTCTGAAACTATTTCTAGTTTTCGGCGTGCTCTTGTGGACGCCCTCT
TGGATACTTCTTGCTATTCTTCCTCCTCATCGGCTTCTCTAAGCCACTCATTCTGGGAGG
GA
■■Homology search results ■■ -
sp_hit_id Q94051
Definition sp|Q94051|CAV1_CAEEL Caveolin-1 OS=Caenorhabditis elegans
Align length 51
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918117|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_G06.
(422 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94051|CAV1_CAEEL Caveolin-1 OS=Caenorhabditis elegans GN=cav... 31 1.7
sp|Q2LPJ8|CH601_SYNAS 60 kDa chaperonin 1 OS=Syntrophus aciditro... 31 2.3
sp|P81284|CH60_BACFO 60 kDa chaperonin OS=Bacteroides forsythus ... 29 6.6
sp|P28667|MRP_MOUSE MARCKS-related protein OS=Mus musculus GN=Ma... 29 8.6
sp|Q6ZU35|K1211_HUMAN Uncharacterized protein KIAA1211 OS=Homo s... 29 8.6
sp|Q8N8I6|CQ055_HUMAN Uncharacterized protein C17orf55 OS=Homo s... 29 8.6

>sp|Q94051|CAV1_CAEEL Caveolin-1 OS=Caenorhabditis elegans GN=cav-1
PE=2 SV=1
Length = 235

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1

Query: 338 PKTRNSFRT*GVRGRAAQEESE-EEGRSASKPKVKKPQEWKGWWSSLEQKE 189
PK + ++ T G + A +E+ EEG + VK+ +E K WWS ++ E
Sbjct: 38 PKPKKNWFTFGKKKAAPTDETNIEEGGAPGDEPVKEKKEKKCWWSRCQKGE 88


>sp|Q2LPJ8|CH601_SYNAS 60 kDa chaperonin 1 OS=Syntrophus
aciditrophicus (strain SB) GN=groL1 PE=3 SV=1
Length = 544

Score = 30.8 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2

Query: 187 FNRGTSKNMWVPDPSKVGTSSVRPHVDLYDQYIRAYEESEAILEQ 53
F+RG +V DP K+ P++ LYD+ I ++ ILEQ
Sbjct: 195 FDRGYVSPYFVTDPEKMEVVMEDPYILLYDKKISVMQDLVPILEQ 239


>sp|P81284|CH60_BACFO 60 kDa chaperonin OS=Bacteroides forsythus
GN=groL PE=1 SV=3
Length = 544

Score = 29.3 bits (64), Expect = 6.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2

Query: 187 FNRGTSKNMWVPDPSKVGTSSVRPHVDLYDQYIRAYEESEAILEQ 53
F+RG +V D K+ T P++ +YD+ I ++ ILEQ
Sbjct: 195 FDRGYISAYFVTDTEKMETQFENPYILIYDKKISVLKDLLPILEQ 239


>sp|P28667|MRP_MOUSE MARCKS-related protein OS=Mus musculus
GN=Marcksl1 PE=1 SV=2
Length = 200

Score = 28.9 bits (63), Expect = 8.6
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1

Query: 308 GVRGRAAQEESEEEGRSASKPKVKKPQEWKGWWSSLEQKEL**GDFEEHVG 156
G + E + +EG++A+ P+ ++PQ KG +S KE GD EE G
Sbjct: 129 GEMSACSDEGTAQEGKAAATPESQEPQA-KGAEASAASKE---GDTEEEAG 175


>sp|Q6ZU35|K1211_HUMAN Uncharacterized protein KIAA1211 OS=Homo
sapiens GN=KIAA1211 PE=1 SV=2
Length = 1233

Score = 28.9 bits (63), Expect = 8.6
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1

Query: 287 QEESEEEGRSASKPKVKKPQEWKGWWSSLEQKE 189
+ + EEEGR A + K ++ +E +G W LEQ+E
Sbjct: 345 RRQEEEEGRCAEELKRQEEEEAEG-WEELEQQE 376


>sp|Q8N8I6|CQ055_HUMAN Uncharacterized protein C17orf55 OS=Homo
sapiens GN=C17orf55 PE=2 SV=1
Length = 264

Score = 28.9 bits (63), Expect = 8.6
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 9/44 (20%)
Frame = -1

Query: 302 RGRAAQEESEEEGRSASKPKVKKPQE------W---KGWWSSLE 198
RG+ QE+ EGR A K K P++ W WW LE
Sbjct: 173 RGQTGQEKGRAEGRQARKSACKCPRKGPNPGPWTRAAAWWGRLE 216


tr_hit_id A7T5N6
Definition tr|A7T5N6|A7T5N6_NEMVE Predicted protein OS=Nematostella vectensis
Align length 30
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918117|Adiantum capillus-veneris mRNA, clone:
YMU001_000109_G06.
(422 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7T5N6|A7T5N6_NEMVE Predicted protein OS=Nematostella vectens... 33 5.4

>tr|A7T5N6|A7T5N6_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g222670 PE=4 SV=1
Length = 1459

Score = 33.5 bits (75), Expect = 5.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1

Query: 308 GVRGRAAQEESEEEGRSASKPKVKKPQEWK 219
GVRG ++ + EE+ S+ K KPQEW+
Sbjct: 1050 GVRGEPSENDEEEDASSSKKKDKAKPQEWE 1079