BP918136 |
Clone id |
YMU001_000110_A03 |
Library |
YMU01 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_A03. |
Accession |
BP918136 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1019Contig1 |
Sequence |
ATTCGCGGCCGCAGGAATTTTTTTTACTGGTATGTAGTGAAAGTTATGTATTTGATGTGG GGAAAAAAACCCACAATGTTTCGAGTGTCATATCTTAGATTATGTAGCCCCGACCTTACT GGAAGTGACATGACAAACCAAAACCAAATCACCCTGACAAAAGTGCATGTCATATACGCT AACAGTCCGTGCTCATCAAAATGTCCACACAAGAATACTAAGCTGGATTTCCATTTGCGA CATTTGATGCTGAGGCACCTTTGGGCTGCCCGATCCCCTGTGACACACTGTATTCTTTCC ATAGTGGTATCACACTTTCAAGATACTGCATGAACTTCCACAAACCCACACGCATCTCAA CATTACCATACCTATCTGCCTTCTGCTCTGGATAGCCAATCCCACATCCAAACAAACCAG GCGCAATGACACCACAATGGGCATTGTAAGTATAGCTAGAGGGTAGCCCAACTATCCCCT TTGGAAGCTCCCTCCTCTCAAAACCTGTTGCATATATAACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6ZU69 |
Definition |
sp|Q6ZU69|CI14B_HUMAN Transmembrane protein C9orf144B OS=Homo sapiens |
Align length |
168 |
Score (bit) |
32.7 |
E-value |
0.93 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918136|Adiantum capillus-veneris mRNA, clone: YMU001_000110_A03. (496 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6ZU69|CI14B_HUMAN Transmembrane protein C9orf144B OS=Homo sa... 33 0.93 sp|P0C7U9|FA87A_HUMAN Protein FAM87A OS=Homo sapiens GN=FAM87A P... 26 2.0 sp|Q63HN1|CI14A_HUMAN Uncharacterized protein C9orf144A OS=Homo ... 32 2.1 sp|A9ND48|ALR_COXBR Alanine racemase OS=Coxiella burnetii (strai... 32 2.1 sp|Q2VPM4|Z703B_XENLA Zinc finger protein 703-B OS=Xenopus laevi... 32 2.1 sp|Q7ZWN6|Z703A_XENLA Zinc finger protein 703-A OS=Xenopus laevi... 32 2.1 sp|Q83D71|ALR_COXBU Alanine racemase OS=Coxiella burnetii GN=alr... 31 3.5 sp|A9KFM0|ALR_COXBN Alanine racemase OS=Coxiella burnetii (strai... 31 3.5 sp|Q566L4|ZN703_XENTR Zinc finger protein 703 OS=Xenopus tropica... 31 3.6 sp|Q8XU95|CAAL_RALSO Carboxylate-amine ligase RSc3298 OS=Ralston... 31 3.6 sp|Q9ZRT1|GR1_ARATH Protein gamma response 1 OS=Arabidopsis thal... 30 4.7 sp|Q54UP0|Y5254_DICDI Putative uncharacterized transmembrane pro... 30 6.0 sp|Q45Z11|NXS1_OXYSC Short neurotoxin SNTX-1 OS=Oxyuranus scutel... 30 7.9
>sp|Q6ZU69|CI14B_HUMAN Transmembrane protein C9orf144B OS=Homo sapiens GN=C9orf144B PE=2 SV=4 Length = 1335
Score = 32.7 bits (73), Expect = 0.93 Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 11/168 (6%) Frame = +3
Query: 3 WYVV-KVMYLMWGKKPTMFRVSYLRLC----------SPDLTGSDMTNQNQITLTKVHVI 149 W+++ + + L WG + R + + SP+ T + T ++ LT+ + Sbjct: 524 WHLLQRQLQLQWGWPAALQRSQHTQCLMQHEPCGKAQSPETTTASQTGKSISVLTRELLF 583
Query: 150 YANSPCSSKCPHKNTKLDFHLRHLMLRHLWAARSPVTHCILSIVVSHFQDTA*TSTNPHA 329 + H L+FH++ ++RH W + I ++ S Q T S++ A Sbjct: 584 FPE--------HARKLLEFHIQKQLIRHRWGLPQKIQQSIQLLLTSTDQQT--VSSSSTA 633
Query: 330 SQHYHTYLPSALDSQSHIQTNQAQ*HHNGHCKYS*RVAQLSPLEAPSS 473 + P AL++ NG C LSP+ AP S Sbjct: 634 LANVSIPQPVALEA-------------NGACDV------LSPIAAPVS 662
>sp|P0C7U9|FA87A_HUMAN Protein FAM87A OS=Homo sapiens GN=FAM87A PE=2 SV=1 Length = 286
Score = 26.2 bits (56), Expect(2) = 2.0 Identities = 9/24 (37%), Positives = 15/24 (62%) Frame = -3
Query: 371 AIQSRRQIGMVMLRCVWVCGSSCS 300 A+QSR + + ++RC W C + S Sbjct: 87 ALQSRPNLSLPLVRCGWACTQAMS 110
Score = 24.3 bits (51), Expect(2) = 2.0 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = -1
Query: 205 KSSLVFL----CGHFDEHGLLAYMTCTFVRVIWFWFVMSLPVRSGLHNLRY 65 +S L FL CG +HG+ +F V W +M L V + N+ Y Sbjct: 135 RSRLGFLGLGGCGLIVKHGMTLRNWASFFVVFQAWSLMILQVLGDMLNIYY 185
>sp|Q63HN1|CI14A_HUMAN Uncharacterized protein C9orf144A OS=Homo sapiens GN=C9orf144A PE=2 SV=1 Length = 556
Score = 31.6 bits (70), Expect = 2.1 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 11/168 (6%) Frame = +3
Query: 3 WYVV-KVMYLMWGKKPTMFRVSYLRLC----------SPDLTGSDMTNQNQITLTKVHVI 149 W+++ + + L WG + R + + SP+ T + T ++ LT+ + Sbjct: 254 WHLLQRQLQLQWGWPAALQRSQHTQCLMQHEPCGKAQSPETTTASQTGKSISVLTRELLF 313
Query: 150 YANSPCSSKCPHKNTKLDFHLRHLMLRHLWAARSPVTHCILSIVVSHFQDTA*TSTNPHA 329 + H L+FH++ +RH W + I ++ S Q T S++ A Sbjct: 314 FPE--------HARKLLEFHIQKQSIRHRWGLPQKIQQSIQLLLTSTDQQT--VSSSSTA 363
Query: 330 SQHYHTYLPSALDSQSHIQTNQAQ*HHNGHCKYS*RVAQLSPLEAPSS 473 + P AL++ NG C LSP+ AP S Sbjct: 364 LANVSIPQPVALEA-------------NGACDV------LSPIAAPVS 392
>sp|A9ND48|ALR_COXBR Alanine racemase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=alr PE=3 SV=1 Length = 364
Score = 31.6 bits (70), Expect = 2.1 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3
Query: 374 LAIQSRRQIGMVMLRCVWVCGSSCSILKV*YHYGKNTVCHRGSGSP 237 +AI++RRQ V C W C I V YG H SG+P Sbjct: 246 IAIKNRRQNDSVGYGCTWSCSEDMPIAIVSIGYGDGYPRHAPSGTP 291
>sp|Q2VPM4|Z703B_XENLA Zinc finger protein 703-B OS=Xenopus laevis GN=znf703-B PE=2 SV=1 Length = 531
Score = 31.6 bits (70), Expect = 2.1 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 15/102 (14%) Frame = +2
Query: 233 PLGCPIPCDTLYSFHSGITLSRYCMNFHKPTRIST------LPYLSAFCSG*PIPHPNKP 394 P P+ + SF G+ YC+++H + + + + SA SG P+ +P+ P Sbjct: 310 PSSSPLTGASPPSFMQGLCRDPYCLSYHNASHLGSSSCSTCVHDPSALKSGYPLVYPSHP 369
Query: 395 ---------GAMTPQWAL*V*LEGSPTIPFGSSLLSKPVAYI 493 ++TP L G P +G L + PV +I Sbjct: 370 LHSVHTTLSSSVTPS------LSGHPLYTYGFMLQNDPVPHI 405
>sp|Q7ZWN6|Z703A_XENLA Zinc finger protein 703-A OS=Xenopus laevis GN=znf703-A PE=2 SV=2 Length = 534
Score = 31.6 bits (70), Expect = 2.1 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 15/102 (14%) Frame = +2
Query: 233 PLGCPIPCDTLYSFHSGITLSRYCMNFHKPTRIST------LPYLSAFCSG*PIPHPNKP 394 P P+ + SF G+ YC+++H + + + + SA SG P+ +P+ P Sbjct: 312 PSSSPLTGASPPSFMQGLCRDPYCLSYHNASHLGSSSCSTCVHDPSALKSGYPLVYPSHP 371
Query: 395 ---------GAMTPQWAL*V*LEGSPTIPFGSSLLSKPVAYI 493 ++TP L G P +G L + PV +I Sbjct: 372 LHSVHTTMSSSVTPS------LSGHPLYTYGFMLQNDPVPHI 407
>sp|Q83D71|ALR_COXBU Alanine racemase OS=Coxiella burnetii GN=alr PE=3 SV=1 Length = 364
Score = 30.8 bits (68), Expect = 3.5 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3
Query: 374 LAIQSRRQIGMVMLRCVWVCGSSCSILKV*YHYGKNTVCHRGSGSP 237 +AI++RRQ V C W C I V YG H SG+P Sbjct: 246 IAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHAPSGTP 291
>sp|A9KFM0|ALR_COXBN Alanine racemase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=alr PE=3 SV=1 Length = 364
Score = 30.8 bits (68), Expect = 3.5 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3
Query: 374 LAIQSRRQIGMVMLRCVWVCGSSCSILKV*YHYGKNTVCHRGSGSP 237 +AI++RRQ V C W C I V YG H SG+P Sbjct: 246 IAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHAPSGTP 291
>sp|Q566L4|ZN703_XENTR Zinc finger protein 703 OS=Xenopus tropicalis GN=znf703 PE=2 SV=1 Length = 537
Score = 30.8 bits (68), Expect = 3.6 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 15/102 (14%) Frame = +2
Query: 233 PLGCPIPCDTLYSFHSGITLSRYCMNFHKPTRIST------LPYLSAFCSG*PIPHPNKP 394 P P+ + SF G+ YC+++H + + + + SA SG P+ +P+ P Sbjct: 315 PSSSPLTGASPPSFMQGLCRDPYCLSYHNASHLGSSSCSTCVHDPSALKSGYPLVYPSHP 374
Query: 395 ---------GAMTPQWAL*V*LEGSPTIPFGSSLLSKPVAYI 493 ++TP L G P +G L + PV +I Sbjct: 375 LHSVHTTLSSSVTPS------LPGHPLYTYGFMLPNDPVPHI 410
>sp|Q8XU95|CAAL_RALSO Carboxylate-amine ligase RSc3298 OS=Ralstonia solanacearum GN=RSc3298 PE=3 SV=1 Length = 377
Score = 30.8 bits (68), Expect = 3.6 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = +2
Query: 209 FATFDAEAPLGCPIPCDTLYSFHSGITLSRYCMNF 313 F F LGCP P D LY H+ +SRY +F Sbjct: 130 FTVFGQHVHLGCPSPDDALYLLHA---MSRYVPHF 161
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5WSN3 |
Definition |
tr|Q5WSN3|Q5WSN3_LEGPL Putative uncharacterized protein OS=Legionella pneumophila (strain Lens) |
Align length |
77 |
Score (bit) |
84.7 |
E-value |
2.0e-15 |
Report |
 |