BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918137|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_A04.
         (480 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A5CXJ7|TIG_VESOH Trigger factor OS=Vesicomyosocius okutanii s...    30   5.6  
sp|Q03427|LAMC_DROME Lamin-C OS=Drosophila melanogaster GN=LamC ...    29   9.6  

>sp|A5CXJ7|TIG_VESOH Trigger factor OS=Vesicomyosocius okutanii
           subsp. Calyptogena okutanii (strain HA) GN=tig PE=3 SV=1
          Length = 429

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
 Frame = +3

Query: 126 VLKSSRAMLDLTYYKEGEIQKL--------INVNDIFSP----LCDQKRD*KGEEKLCTI 269
           V  SSR +LDLT+ K+  + KL        IN+N+I SP    L +      GE+ +  +
Sbjct: 205 VAYSSRVVLDLTFPKDYYMDKLASKDVTFEININEIASPKELKLDETFAKKFGEKNMNAL 264

Query: 270 QIQHVLQW-LKVSSIIV*LKRTPPFS*NSLYNPYSIPP-SLKGHNRNLALIKRD 425
           ++    Q  ++V   I  L +   F   +  NP+++P  S+    +NL    +D
Sbjct: 265 RVSMKEQMRVEVDGRIGHLNKNAIFDKLTTANPFNVPQHSIDNEAQNLFKAMQD 318


>sp|Q03427|LAMC_DROME Lamin-C OS=Drosophila melanogaster GN=LamC
           PE=1 SV=2
          Length = 621

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +3

Query: 57  QHVSLSLDTPEPHSGNVKFMWPIVLKSSRAMLDLTYYK----EGEIQKLINVNDIFSPLC 224
           Q ++L+ DT    + N+K ++   L ++R +LD T  +    E +I++L   ND   P  
Sbjct: 76  QELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRL 135

Query: 225 DQK 233
           D+K
Sbjct: 136 DKK 138

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918137|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_A04.
         (480 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0EHR0|B0EHR0_ENTDI Putative uncharacterized protein OS=Entam...    34   3.2  
tr|Q1KWM6|Q1KWM6_9HIV1 Envelope glycoprotein OS=Human immunodefi...    33   7.0  

>tr|B0EHR0|B0EHR0_ENTDI Putative uncharacterized protein
           OS=Entamoeba dispar SAW760 GN=EDI_044100 PE=4 SV=1
          Length = 645

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 75  LDTPEP-HSGNVKFMWPIVLKSSRAMLDLTYYKEGEIQKLINVNDIFSPLCDQKRD*KGE 251
           L T EP HSGN   + PIV +S     D   Y   EIQK I V+         K + K  
Sbjct: 338 LPTQEPDHSGNPNLLAPIVSRSGFTYFDPNLYNIKEIQKRIRVDAKIGKFIKPKVEKKQR 397

Query: 252 EK 257
           EK
Sbjct: 398 EK 399


>tr|Q1KWM6|Q1KWM6_9HIV1 Envelope glycoprotein OS=Human
           immunodeficiency virus 1 GN=env PE=4 SV=1
          Length = 850

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 137 GLQHNWPHEFHISTMGFWCI*AEGDMLKLCFLVLNSW 27
           G+Q NWPH +    +GFW       ML +C +V N W
Sbjct: 5   GIQRNWPHWWIWGILGFW-------MLLICRVVGNLW 34