BP918154
Clone id YMU001_000110_B11
Library
Length 290
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGAGCCACCTTCAGCAAGTGGACTGTCCTCTACAGTGGCAGAGACCTCAGTAGCTTGAG
TTCAGTGCTCCTGATGGTTTTCCCTCTCTGATTTCCCCGGAATCCCCTGGGTAGATTTTT
TGGTGATGCTAGTTGCTTCTTATCTGTCATCTTCGTCATCGACTGTTAGCACTCTTCTGT
GTCTCCTCAGACCATGGTTGCAGATGGTCCTAGTTGGTGGGCGTTCGCTGATGGCTTTGT
CGGTGGCGGGATTTTGGAGTATAGTTGCTGAGAGCACTATCGGTGGGAAG
■■Homology search results ■■ -
sp_hit_id Q9SD67
Definition sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana
Align length 40
Score (bit) 30.4
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918154|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_B11.
(290 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7, chl... 30 2.8
sp|Q8WN57|TYRP1_BOVIN 5,6-dihydroxyindole-2-carboxylic acid oxid... 29 8.2

>sp|Q9SD67|FTSH7_ARATH Cell division protease ftsH homolog 7,
chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1
Length = 802

Score = 30.4 bits (67), Expect = 2.8
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -2

Query: 187 RRHRRVLTVDDEDDR*EATSITKKSTQGIPGKSERENHQE 68
R+ R++ EDD+ E++S ++S+Q P KSER+ ++
Sbjct: 78 RKKSRLVVNCQEDDQNESSSEEEESSQSTPAKSERKREKK 117


>sp|Q8WN57|TYRP1_BOVIN 5,6-dihydroxyindole-2-carboxylic acid oxidase
OS=Bos taurus GN=TYRP1 PE=2 SV=2
Length = 537

Score = 28.9 bits (63), Expect = 8.2
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -1

Query: 197 PWSEETQKSANSXXXX*QIRSN*HHQKIYPGDSGEIREGKPSGALNSSY*GLCHCRG 27
P S+ S+ I + H YP D + REG P+ + N + CHC G
Sbjct: 51 PGSDRCGLSSGRGRCEVVIADSRPHSHHYPHDGRDDREGWPTRSFNRT----CHCNG 103


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918154|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_B11.
(290 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******