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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918155
Clone id YMU001_000110_B12
Library
Length 365
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTCACATCCTCTGGAACACTGCAGTTGTTCGATGCCCTCCTCGAGCCAATATATCATCTT
ACACAGCCACTTTTTAGGTAGATTTGCAGTATCTACCCCAGGAGGAAGAAGGCGCCATTT
TTGACACTTATCACAACCCACCCAGTTGTCCACAATTAGTTCATAAGGAGGAGCACCATT
TCCTGCTACTGGAGCTCCTAACTGAGGTTGTTGAGGTTGCTGGGATTGCTTACCTTCCCT
AACTGCTTCAGAAACATAGGCTGGATGTGAAACTTTTGTGGGCACATCTTTTGTTGCCAA
TTCTCTTTGTCTCTCCTCAGAAACTTTAGAAGGTTCTTTACTGCCAAAATCAGATGTGAT
CCTTT
■■Homology search results ■■ -
sp_hit_id Q8BMD7
Definition sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus
Align length 28
Score (bit) 44.3
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918155|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_B12.
         (365 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 ...    44   2e-04
sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 ...    44   3e-04
sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 ...    43   6e-04
sp|Q6IR42|ZCPW1_MOUSE Zinc finger CW-type PWWP domain protein 1 ...    34   0.20 
sp|O88689|PCDA4_MOUSE Protocadherin alpha-4 OS=Mus musculus GN=P...    34   0.26 
sp|Q2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2 O...    32   0.76 
sp|Q9H0M4|ZCPW1_HUMAN Zinc finger CW-type PWWP domain protein 1 ...    31   2.2  
sp|Q767I8|PCDA4_RAT Protocadherin alpha-4 OS=Rattus norvegicus G...    31   2.2  
sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A...    30   2.9  
sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 ...    30   3.8  
sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 ...    30   3.8  
sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein 2 O...    30   4.9  
sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12 OS=Arabido...    30   4.9  
sp|Q9Y7V2|BYE1_SCHPO Transcription factor bye1 OS=Schizosaccharo...    30   4.9  
sp|Q92F76|Y230_LISIN UPF0249 protein lin0230 OS=Listeria innocua...    29   6.4  
sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B...    29   6.4  
sp|Q9LE42|HAC5_ARATH Histone acetyltransferase HAC5 OS=Arabidops...    29   6.4  
sp|Q9M1I1|FB304_ARATH F-box protein At3g54455/At3g54460 OS=Arabi...    29   6.4  
sp|Q5UPL0|YL137_MIMIV Uncharacterized protein L137 OS=Acanthamoe...    29   8.4  
sp|Q4KIF6|IF2_PSEF5 Translation initiation factor IF-2 OS=Pseudo...    29   8.4  

>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4
           OS=Mus musculus GN=Morc4 PE=2 SV=2
          Length = 928

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -3

Query: 144 WVGCDKCQKWRLLPPGVDTANLPKKWLC 61
           WV CD+C KWR LP  VD + LP +W C
Sbjct: 423 WVQCDECLKWRRLPGMVDPSTLPARWFC 450


>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4
           OS=Homo sapiens GN=MORC4 PE=1 SV=2
          Length = 937

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 144 WVGCDKCQKWRLLPPGVDTANLPKKWLC 61
           WV CD+C KWR LP  +D + LP +W C
Sbjct: 426 WVQCDECLKWRKLPGKIDPSMLPARWFC 453


>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3
           OS=Homo sapiens GN=MORC3 PE=1 SV=3
          Length = 939

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = -3

Query: 144 WVGCDKCQKWRLLPPGVDTANLPKKWLC 61
           WV CD C KWR LP G+D   LP+KW C
Sbjct: 410 WVQCDACLKWRKLPDGMD--QLPEKWYC 435


>sp|Q6IR42|ZCPW1_MOUSE Zinc finger CW-type PWWP domain protein 1
           homolog OS=Mus musculus GN=Zcwpw1 PE=2 SV=1
          Length = 630

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 144 WVGCD--KCQKWRLLPPGVDTANLPKKWLC 61
           WV C   KC+KWR L   +D + LP  W C
Sbjct: 247 WVQCSSPKCEKWRQLRGNIDPSVLPDDWSC 276


>sp|O88689|PCDA4_MOUSE Protocadherin alpha-4 OS=Mus musculus
           GN=Pcdha4 PE=1 SV=1
          Length = 947

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -3

Query: 192 PVAGNGAPPYELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWLEE 37
           PV+G      E+IV  ++  ++C+ + +L  G+D   LP    CK+I  +E+
Sbjct: 297 PVSG------EIIVKGYIDFEECKSYEILIEGIDKGQLPLSGHCKVIVQVED 342


>sp|Q2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2
           OS=Arabidopsis thaliana GN=ASHH2 PE=2 SV=1
          Length = 1759

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 144 WVGCDKCQKWRLLPPG-VDTANLPKKWLC 61
           WV CD C KWR +P   V + +   +W+C
Sbjct: 865 WVRCDDCFKWRRIPASVVGSIDESSRWIC 893


>sp|Q9H0M4|ZCPW1_HUMAN Zinc finger CW-type PWWP domain protein 1
           OS=Homo sapiens GN=ZCWPW1 PE=1 SV=2
          Length = 648

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = -3

Query: 144 WVGCD--KCQKWRLLPPGVDTANLPKKWLC 61
           WV C    C KWR L   +D + LP  W C
Sbjct: 256 WVQCSFPNCGKWRRLCGNIDPSVLPDNWSC 285


>sp|Q767I8|PCDA4_RAT Protocadherin alpha-4 OS=Rattus norvegicus
           GN=Pcdha4 PE=2 SV=1
          Length = 947

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 162 ELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWLEE 37
           E+ V  ++  ++C  + +L  G+D   LP    CK+I  +E+
Sbjct: 301 EIAVKGYIDFEECTSYEILIEGIDKGQLPLSGHCKVIVQVED 342


>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A
           OS=Mus musculus GN=Morc2a PE=2 SV=2
          Length = 1030

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -3

Query: 141 VGCDKCQKWRLLP---PGVDTANLPKKWLCKM 55
           + CD C KWR LP     V+T + P  W+C M
Sbjct: 497 IQCDLCLKWRTLPFQLSSVET-DYPDTWVCSM 527


>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2
           OS=Homo sapiens GN=MORC2 PE=1 SV=2
          Length = 1032

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 141 VGCDKCQKWRLLPPGVDTA--NLPKKWLCKM 55
           + CD C KWR LP  + +   + P  W+C M
Sbjct: 497 IQCDLCLKWRTLPFQLSSVEKDYPDTWVCSM 527
tr_hit_id B8APF4
Definition tr|B8APF4|B8APF4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 106
Score (bit) 75.5
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918155|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_B12.
         (365 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8APF4|B8APF4_ORYSI Putative uncharacterized protein OS=Oryza...    75   1e-12
tr|A3AHV9|A3AHV9_ORYSJ Putative uncharacterized protein OS=Oryza...    75   1e-12
tr|Q10LI9|Q10LI9_ORYSJ Os03g0347300 protein OS=Oryza sativa subs...    67   4e-10
tr|A7PS71|A7PS71_VITVI Chromosome chr14 scaffold_27, whole genom...    67   6e-10
tr|A7PTW9|A7PTW9_VITVI Chromosome chr7 scaffold_31, whole genome...    66   1e-09
tr|A5BJN7|A5BJN7_VITVI Putative uncharacterized protein OS=Vitis...    66   1e-09
tr|Q9LZH6|Q9LZH6_ARATH Putative uncharacterized protein F26K9_33...    62   1e-08
tr|A7NW54|A7NW54_VITVI Chromosome chr5 scaffold_2, whole genome ...    61   2e-08
tr|A5ALQ1|A5ALQ1_VITVI Putative uncharacterized protein OS=Vitis...    61   2e-08
tr|Q60EW4|Q60EW4_ORYSJ Putative uncharacterized protein OJ1118_F...    60   4e-08
tr|Q0DIQ5|Q0DIQ5_ORYSJ Os05g0371100 protein OS=Oryza sativa subs...    60   4e-08
tr|B8AXG0|B8AXG0_ORYSI Putative uncharacterized protein OS=Oryza...    60   4e-08
tr|B8B5T9|B8B5T9_ORYSI Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|A3BN93|A3BN93_ORYSJ Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|B6KQ27|B6KQ27_TOXGO CW-type zinc finger domain-containing pro...    57   4e-07
tr|Q8GY51|Q8GY51_ARATH Putative uncharacterized protein At4g1573...    54   4e-06
tr|O23424|O23424_ARATH Putative uncharacterized protein dl3905c ...    54   4e-06
tr|Q8I1N9|Q8I1N9_PLAF7 Putative uncharacterized protein PFD0970c...    53   7e-06
tr|Q503H6|Q503H6_DANRE Zgc:162471 protein (Fragment) OS=Danio re...    53   9e-06
tr|A4QN72|A4QN72_DANRE Zgc:162471 protein OS=Danio rerio GN=zgc:...    53   9e-06
tr|A7RYU4|A7RYU4_NEMVE Predicted protein OS=Nematostella vectens...    53   9e-06
tr|A5K648|A5K648_PLAVI CW-type zinc finger domain-containing pro...    53   9e-06
tr|Q4UD02|Q4UD02_THEAN Putative uncharacterized protein OS=Theil...    52   1e-05
tr|B3L1M6|B3L1M6_PLAKH CW-type zinc finger protein, putative OS=...    52   1e-05
tr|Q4N0Q4|Q4N0Q4_THEPA Putative uncharacterized protein OS=Theil...    52   1e-05
tr|Q4S0G0|Q4S0G0_TETNG Chromosome 2 SCAF14781, whole genome shot...    51   3e-05
tr|A7AMX7|A7AMX7_BABBO CW-type zinc finger family protein OS=Bab...    50   7e-05
tr|B8CCM1|B8CCM1_THAPS Predicted protein OS=Thalassiosira pseudo...    49   1e-04
tr|Q7RDD8|Q7RDD8_PLAYO Putative uncharacterized protein PY05484 ...    49   2e-04
tr|Q4YVP6|Q4YVP6_PLABE Putative uncharacterized protein (Fragmen...    49   2e-04

>tr|B8APF4|B8APF4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11549 PE=4 SV=1
          Length = 1545

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
 Frame = -3

Query: 345 GSKEPSKVSEERQREL-----ATKDVPTKVSHPAYVSEAVREGKXXXXXXXXQLGAPVAG 181
           G ++   ++ + ++EL     A K++P+ V H  +      E +         +  P   
Sbjct: 600 GQRKEKMMNSDNEKELHITGPAKKEIPSSVKHGTFPGS--EEQQLHMPSNGGIIPGPANA 657

Query: 180 NGAPPYELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
              P   LI DNWV CD C KWRLLP G +T+ LPKKW+C M+ WL
Sbjct: 658 ASLPAPVLIEDNWVCCDMCHKWRLLPYGTNTSMLPKKWICSMLDWL 703


>tr|A3AHV9|A3AHV9_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_010381 PE=4 SV=1
          Length = 1891

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
 Frame = -3

Query: 345  GSKEPSKVSEERQREL-----ATKDVPTKVSHPAYVSEAVREGKXXXXXXXXQLGAPVAG 181
            G ++   ++ + ++EL     A K++P+ V H  +      E +         +  P   
Sbjct: 956  GQRKEKMMNSDNEKELHITGPAKKEIPSSVKHGTFPGS--EEQQLHMPSNGGIIPGPANA 1013

Query: 180  NGAPPYELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
               P   LI DNWV CD C KWRLLP G +T+ LPKKW+C M+ WL
Sbjct: 1014 ASLPAPVLIEDNWVCCDMCHKWRLLPYGTNTSMLPKKWICSMLDWL 1059


>tr|Q10LI9|Q10LI9_ORYSJ Os03g0347300 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0347300 PE=4 SV=1
          Length = 902

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 28/50 (56%), Positives = 32/50 (64%)
 Frame = -3

Query: 192 PVAGNGAPPYELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           P      P   LI DNWV CD C KWRLLP G +T+ LPKKW+C M+ WL
Sbjct: 11  PANAASLPAPVLIEDNWVCCDMCHKWRLLPYGTNTSMLPKKWICSMLDWL 60


>tr|A7PS71|A7PS71_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022790001
           PE=4 SV=1
          Length = 687

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
 Frame = -3

Query: 180 NGAPPYEL----IVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           +GA P E+    I +NWV CDKC KWRLLP G +   LPKKWLC M+YWL
Sbjct: 513 SGALPTEVAPVVIQENWVCCDKCHKWRLLPYGENPNCLPKKWLCSMLYWL 562


>tr|A7PTW9|A7PTW9_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023564001
           PE=4 SV=1
          Length = 1423

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -3

Query: 159 LIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           +I +NWV CDKCQKWRLLP G++  +LP+KWLC M+ WL
Sbjct: 594 VIEENWVCCDKCQKWRLLPIGINPDHLPEKWLCSMLSWL 632


>tr|A5BJN7|A5BJN7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_006858 PE=4 SV=1
          Length = 1671

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -3

Query: 159 LIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           +I +NWV CDKCQKWRLLP G++  +LP+KWLC M+ WL
Sbjct: 649 VIEENWVCCDKCQKWRLLPIGINPDHLPEKWLCSMLSWL 687


>tr|Q9LZH6|Q9LZH6_ARATH Putative uncharacterized protein F26K9_330
           OS=Arabidopsis thaliana GN=F26K9_330 PE=4 SV=1
          Length = 1401

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = -3

Query: 351 DFGSKEPSKVSEERQRELATKDVPTKVSHPAYVS-EAVREGKXXXXXXXXQLGAPVAGNG 175
           D G  E  +  + +   ++ K +P     P   S   V            +LG+  +   
Sbjct: 510 DIGDSEEEEEQDVKDLRISEKGLPPLEDMPEKSSLPLVEPQNVGPEPMLRKLGSDASLPK 569

Query: 174 APPYELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           A P  +I ++WV CDKC KWRLLP GV   +LP+KW+C M+ WL
Sbjct: 570 ANPV-IIQEHWVACDKCGKWRLLPFGVFPEDLPEKWMCTMLNWL 612


>tr|A7NW54|A7NW54_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019788001
           PE=4 SV=1
          Length = 1279

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = -3

Query: 159 LIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           +I +NWV CD CQKWRLLP G    +LP+KWLC M+ WL
Sbjct: 435 VIEENWVCCDSCQKWRLLPFGKKPEHLPEKWLCSMLSWL 473


>tr|A5ALQ1|A5ALQ1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015865 PE=4 SV=1
          Length = 1619

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = -3

Query: 159 LIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWL 43
           +I +NWV CD CQKWRLLP G    +LP+KWLC M+ WL
Sbjct: 655 VIEENWVCCDSCQKWRLLPFGKKPEHLPEKWLCSMLSWL 693


>tr|Q60EW4|Q60EW4_ORYSJ Putative uncharacterized protein
           OJ1118_F06.12 OS=Oryza sativa subsp. japonica
           GN=OJ1118_F06.12 PE=4 SV=1
          Length = 1276

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -3

Query: 174 APPYELIVDNWVGCDKCQKWRLLPPGVDTANLPKKWLCKMIYWLEEGIEQLQCSRG 7
           A P    VD WV CDKC+ WRLLP G+++  LPKKW C M  WL  G+   + S G
Sbjct: 438 AVPASEPVDQWVCCDKCETWRLLPYGMNSDTLPKKWRCSMQSWL-PGMNNCKLSEG 492