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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918157
Clone id YMU001_000110_C02
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGTTCCTGAAAAACGACCTACTGCCAGTCAATGTCTTTTGCATTCATGGCTCAATGTAGG
ACTTCACAATACACAGGCTCAGTTTTTGTCAAACCAGGGCCAGGTAGGCTCTGAAGTCCA
AAATGAGAGGTCTACTGTTGTAGGGACTAAAGACGCTATGGAGAAAGCCGAGGAAGCAAT
GGGGAATATTGTGTTGGCCAGTGGCCAAATGGATAAAGACAGGCTTTCTGGGAGAGCAAA
TCATGGAGGTACTTCTAGTTTTTGATAAAGAGCTCCTAATATGAGTCTGATTACTATTCG
TGGTCTCTTAAGGAGCATTTACAGTTGTTTATTTTCAATTGACATTTATTCACATCTCTC
ACTGATCTTCAATGATTCATTCACATTGCTTCTTGCCACGGCTCACCAAAGACATTTATA
TGATTTGAGAAAAACCTTGTTGGAGGAATTCGTACCCTCCAGAACGAGAAAGTTGCATGT
ATCTAACGTGTGTATCAAGACTTGGTCCTCATTGTGGACTGCTTTTGTGTACTACAATTC
AAGCCCATTG
■■Homology search results ■■ -
sp_hit_id Q91XS8
Definition sp|Q91XS8|ST17B_RAT Serine/threonine-protein kinase 17B OS=Rattus norvegicus
Align length 16
Score (bit) 33.9
E-value 0.54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918157|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_C02.
         (550 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91XS8|ST17B_RAT Serine/threonine-protein kinase 17B OS=Rattu...    34   0.54 
sp|Q8BG48|ST17B_MOUSE Serine/threonine-protein kinase 17B OS=Mus...    34   0.54 
sp|O94768|ST17B_HUMAN Serine/threonine-protein kinase 17B OS=Hom...    33   0.70 
sp|Q5RD27|SRPK1_PONAB Serine/threonine-protein kinase SRPK1 OS=P...    33   0.70 
sp|Q96SB4|SRPK1_HUMAN Serine/threonine-protein kinase SRPK1 OS=H...    33   0.70 
sp|O70551|SRPK1_MOUSE Serine/threonine-protein kinase SRPK1 OS=M...    33   1.2  
sp|O54781|SRPK2_MOUSE Serine/threonine-protein kinase SRPK2 OS=M...    32   2.0  
sp|Q9Z0G2|SRPK3_MOUSE Serine/threonine-protein kinase SRPK3 OS=M...    31   3.5  
sp|Q9UPE1|SRPK3_HUMAN Serine/threonine-protein kinase SRPK3 OS=H...    31   3.5  
sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=...    31   4.6  
sp|Q5VST9|OBSCN_HUMAN Obscurin OS=Homo sapiens GN=OBSCN PE=1 SV=3      31   4.6  
sp|A1R4G4|PTH_ARTAT Peptidyl-tRNA hydrolase OS=Arthrobacter aure...    30   6.0  
sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus GN=Obscn PE=2 SV=2      30   7.8  

>sp|Q91XS8|ST17B_RAT Serine/threonine-protein kinase 17B OS=Rattus
           norvegicus GN=Stk17b PE=1 SV=1
          Length = 371

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +2

Query: 5   PEKRPTASQCLLHSWL 52
           PEKRPTA  CL HSWL
Sbjct: 278 PEKRPTAESCLSHSWL 293


>sp|Q8BG48|ST17B_MOUSE Serine/threonine-protein kinase 17B OS=Mus
           musculus GN=Stk17b PE=2 SV=1
          Length = 372

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +2

Query: 5   PEKRPTASQCLLHSWL 52
           PEKRPTA  CL HSWL
Sbjct: 278 PEKRPTAESCLSHSWL 293


>sp|O94768|ST17B_HUMAN Serine/threonine-protein kinase 17B OS=Homo
           sapiens GN=STK17B PE=1 SV=1
          Length = 372

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = +2

Query: 5   PEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKA 169
           PEKRPTA  CL HSW    L     + L +  +  S  Q +  +V  ++D   K+
Sbjct: 278 PEKRPTAEICLSHSW----LQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTSKS 328


>sp|Q5RD27|SRPK1_PONAB Serine/threonine-protein kinase SRPK1
           OS=Pongo abelii GN=SRPK1 PE=2 SV=2
          Length = 655

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLN 55
           +PEKR TA++CL H WLN
Sbjct: 637 IPEKRATAAECLRHPWLN 654


>sp|Q96SB4|SRPK1_HUMAN Serine/threonine-protein kinase SRPK1 OS=Homo
           sapiens GN=SRPK1 PE=1 SV=2
          Length = 655

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLN 55
           +PEKR TA++CL H WLN
Sbjct: 637 IPEKRATAAECLRHPWLN 654


>sp|O70551|SRPK1_MOUSE Serine/threonine-protein kinase SRPK1 OS=Mus
           musculus GN=Srpk1 PE=1 SV=2
          Length = 648

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLN 55
           +PEKR TA++CL H WLN
Sbjct: 630 MPEKRATAAECLRHPWLN 647


>sp|O54781|SRPK2_MOUSE Serine/threonine-protein kinase SRPK2 OS=Mus
           musculus GN=Srpk2 PE=1 SV=2
          Length = 681

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLN 55
           VPEKR +A +CL H WLN
Sbjct: 663 VPEKRASAGECLRHPWLN 680


>sp|Q9Z0G2|SRPK3_MOUSE Serine/threonine-protein kinase SRPK3 OS=Mus
           musculus GN=Srpk3 PE=2 SV=1
          Length = 565

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLN 55
           +PEKR +A+ CL H WLN
Sbjct: 547 IPEKRASAADCLQHPWLN 564


>sp|Q9UPE1|SRPK3_HUMAN Serine/threonine-protein kinase SRPK3 OS=Homo
           sapiens GN=SRPK3 PE=2 SV=1
          Length = 533

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLN 55
           +PEKR +A+ CL H WLN
Sbjct: 515 IPEKRASAADCLQHPWLN 532


>sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1
           SV=3
          Length = 2363

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +2

Query: 8   EKRPTASQCLLHS---WLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEA 178
           EKR    + LLHS   WLN  L     + L+   + G+E+   +  +   K+ + + EE 
Sbjct: 180 EKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQ 239

Query: 179 MGNIVLASGQMDK 217
           M  +  ++  + K
Sbjct: 240 MNGLKTSNEHLQK 252
tr_hit_id Q9LF89
Definition tr|Q9LF89|Q9LF89_ARATH Serine protein kinase-like OS=Arabidopsis thaliana
Align length 67
Score (bit) 49.3
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918157|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_C02.
         (550 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LF89|Q9LF89_ARATH Serine protein kinase-like OS=Arabidopsis...    49   1e-04
tr|Q9FYB3|Q9FYB3_ARATH SRPK4 OS=Arabidopsis thaliana GN=srpk4 PE...    49   1e-04
tr|Q94AX8|Q94AX8_ARATH AT3g53030/F8J2_200 OS=Arabidopsis thalian...    49   1e-04
tr|A7PPN4|A7PPN4_VITVI Chromosome chr8 scaffold_23, whole genome...    49   1e-04
tr|Q9FYC5|Q9FYC5_ARATH Putative uncharacterized protein F28D10_4...    46   0.001
tr|A7PQL7|A7PQL7_VITVI Chromosome chr6 scaffold_25, whole genome...    45   0.003
tr|Q6JJ37|Q6JJ37_IPOTF Putative serine/arginine (SR) protein kin...    44   0.007
tr|Q9FE52|Q9FE52_ARATH SRPK3 (Serine protein kinase-like protein...    43   0.010
tr|Q8LGG5|Q8LGG5_ARATH Serine protein kinase-like protein OS=Ara...    43   0.010
tr|Q0WRI9|Q0WRI9_ARATH Serine protein kinase like protein OS=Ara...    43   0.010
tr|B6U0K3|B6U0K3_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1       41   0.037
tr|Q9SHL5|Q9SHL5_ARATH Putative uncharacterized protein At2g1753...    39   0.24 
tr|Q9FYB4|Q9FYB4_ARATH SRPK1 OS=Arabidopsis thaliana GN=srpk1 PE...    37   0.53 
tr|O81783|O81783_ARATH Protein kinase-like protein OS=Arabidopsi...    37   0.53 
tr|A7PKW0|A7PKW0_VITVI Chromosome chr7 scaffold_20, whole genome...    37   0.90 
tr|A5BCD5|A5BCD5_VITVI Putative uncharacterized protein OS=Vitis...    37   0.90 
tr|Q8W306|Q8W306_ORYSA SRPK4 OS=Oryza sativa PE=4 SV=1                 36   1.2  
tr|Q10CW1|Q10CW1_ORYSJ Protein kinase family protein, putative, ...    36   1.2  
tr|A2XM01|A2XM01_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.2  
tr|Q4S887|Q4S887_TETNG Chromosome 3 SCAF14707, whole genome shot...    35   2.6  
tr|A4IHA0|A4IHA0_XENTR LOC100124819 protein OS=Xenopus tropicali...    35   2.6  
tr|Q8S3K5|Q8S3K5_ELAOL Serine/threonine protein kinase SRPK1 (Fr...    35   2.6  
tr|B5DS58|B5DS58_DROPS GA27948 OS=Drosophila pseudoobscura pseud...    35   2.6  
tr|B4H9R0|B4H9R0_DROPE GL18373 OS=Drosophila persimilis GN=GL183...    35   2.6  
tr|A1L2D3|A1L2D3_DANRE Serine/arginine-rich protein specific kin...    35   3.4  
tr|Q7F0A0|Q7F0A0_ORYSJ Serine/threonine protein-like protein OS=...    35   3.4  
tr|Q0D6J6|Q0D6J6_ORYSJ Os07g0472400 protein OS=Oryza sativa subs...    35   3.4  
tr|B8B5Y8|B8B5Y8_ORYSI Putative uncharacterized protein OS=Oryza...    35   3.4  
tr|B4G1A4|B4G1A4_MAIZE Putative uncharacterized protein OS=Zea m...    35   3.4  
tr|A3BJM6|A3BJM6_ORYSJ Putative uncharacterized protein OS=Oryza...    35   3.4  

>tr|Q9LF89|Q9LF89_ARATH Serine protein kinase-like OS=Arabidopsis
           thaliana GN=F8J2_200 PE=4 SV=1
          Length = 523

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCLLH W+N G  + +              +N+R       +  E  E  M
Sbjct: 444 VPEKRPTAAQCLLHPWINSGPRSIKPSLKDENSDKLDTEKNKRE-----NEEQEAVEVKM 498

Query: 182 GNIVLAS 202
           GN+V++S
Sbjct: 499 GNVVISS 505


>tr|Q9FYB3|Q9FYB3_ARATH SRPK4 OS=Arabidopsis thaliana GN=srpk4 PE=2
           SV=1
          Length = 529

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCLLH W+N G  + +              +N+R       +  E  E  M
Sbjct: 450 VPEKRPTAAQCLLHPWINSGPRSIKPSLKDENSDKLDTEKNKRE-----NEEQEAVEVKM 504

Query: 182 GNIVLAS 202
           GN+V++S
Sbjct: 505 GNVVISS 511


>tr|Q94AX8|Q94AX8_ARATH AT3g53030/F8J2_200 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 529

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCLLH W+N G  + +              +N+R       +  E  E  M
Sbjct: 450 VPEKRPTAAQCLLHPWINSGPRSIKPSLKDENSDKLDTEKNKRE-----NEEQEAVEVKM 504

Query: 182 GNIVLAS 202
           GN+V++S
Sbjct: 505 GNVVISS 511


>tr|A7PPN4|A7PPN4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021715001
           PE=4 SV=1
          Length = 557

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 28/67 (41%), Positives = 37/67 (55%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCLLH W++ G    +    S + Q G  V  E+      KD  E  E  M
Sbjct: 469 VPEKRPTAAQCLLHPWISAGPLLLEPSMPSVKIQAGESVICEKKK--REKDEREAMEIGM 526

Query: 182 GNIVLAS 202
           GNI +++
Sbjct: 527 GNIAISA 533


>tr|Q9FYC5|Q9FYC5_ARATH Putative uncharacterized protein F28D10_40
           OS=Arabidopsis thaliana GN=F28D10_40 PE=4 SV=1
          Length = 534

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 26/65 (40%), Positives = 31/65 (47%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCL H W N G    +   L  Q   G E       +   KD  E  E  +
Sbjct: 465 VPEKRPTAAQCLKHPWFNPGPRLLEPS-LKPQQPKGEEEGAANENIEKEKDEREAMEAGV 523

Query: 182 GNIVL 196
           GNI +
Sbjct: 524 GNIAI 528


>tr|A7PQL7|A7PQL7_VITVI Chromosome chr6 scaffold_25, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022115001
           PE=4 SV=1
          Length = 470

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 24/65 (36%), Positives = 31/65 (47%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCL H W+N G    +    S        V  +R      +D  E  E  +
Sbjct: 391 VPEKRPTAAQCLTHPWINAGPRLREPSIASLPKATDGGVSEKRE-----RDEREAMEVGV 445

Query: 182 GNIVL 196
           GNI +
Sbjct: 446 GNIAI 450


>tr|Q6JJ37|Q6JJ37_IPOTF Putative serine/arginine (SR) protein kinase
           protein (Putative uncharacterized protein) OS=Ipomoea
           trifida PE=4 SV=1
          Length = 555

 Score = 43.5 bits (101), Expect = 0.007
 Identities = 26/65 (40%), Positives = 33/65 (50%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEKAEEAM 181
           VPEKRPTA+QCL H W+  G  N     ++N    G E  N +      KD  E  E  +
Sbjct: 479 VPEKRPTAAQCLTHPWIMGGPRNLVPSAINNSPPHGPE--NGKCI---EKDERETMEARV 533

Query: 182 GNIVL 196
           GNI +
Sbjct: 534 GNIAI 538


>tr|Q9FE52|Q9FE52_ARATH SRPK3 (Serine protein kinase-like protein)
           OS=Arabidopsis thaliana GN=srpk3 PE=2 SV=1
          Length = 538

 Score = 43.1 bits (100), Expect = 0.010
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEK--AEE 175
           VPEKRPTA+QCL H WLN    + +    S+  Q   E + E S     K+ +E+   E 
Sbjct: 454 VPEKRPTAAQCLTHPWLNPVPKSLKP---SSSPQNPKEEEEEASDEDKDKEKVEREAMEA 510

Query: 176 AMGNIVLASGQMDKDRLSGR 235
            +GNI +   +       GR
Sbjct: 511 GVGNIAIDGSERKTSAREGR 530


>tr|Q8LGG5|Q8LGG5_ARATH Serine protein kinase-like protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 538

 Score = 43.1 bits (100), Expect = 0.010
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEK--AEE 175
           VPEKRPTA+QCL H WLN    + +    S+  Q   E + E S     K+ +E+   E 
Sbjct: 454 VPEKRPTAAQCLTHPWLNPVPKSLKP---SSSPQNPKEEEEEASDEDKDKEKVEREAMEA 510

Query: 176 AMGNIVLASGQMDKDRLSGR 235
            +GNI +   +       GR
Sbjct: 511 GVGNIAIDGSERKTSAREGR 530


>tr|Q0WRI9|Q0WRI9_ARATH Serine protein kinase like protein
           OS=Arabidopsis thaliana GN=At5g22840 PE=2 SV=1
          Length = 538

 Score = 43.1 bits (100), Expect = 0.010
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   VPEKRPTASQCLLHSWLNVGLHNTQAQFLSNQGQVGSEVQNERSTVVGTKDAMEK--AEE 175
           VPEKRPTA+QCL H WLN    + +    S+  Q   E + E S     K+ +E+   E 
Sbjct: 454 VPEKRPTAAQCLTHPWLNPVPKSLKP---SSSPQNPKEEEEEASDEDKDKEKVEREAMEA 510

Query: 176 AMGNIVLASGQMDKDRLSGR 235
            +GNI +   +       GR
Sbjct: 511 GVGNIAIDGSERKTSAREGR 530