BP918162 [AcEST]

BP918162
Clone id	YMU001_000110_C07
Library	YMU01
Length	492
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000110_C07.
Accession	BP918162
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	ACAAGACATACACAGGCGCCTGCGCATGATCTTTACATTACCACAAATTGTTAAAGTGTC TTAGATCATCTTTCATTGCCCATGTCATCAATCTGACACTTGAAAATTTGAACCAAGCCT TTTAATTTGTTAAACTCGTCGCTGAGTGATATCATCCACAAGGGGTAAAAGAATGGGAGA AGAATTCATTCGGGAGTACAAAACGAAGCTTCTGCCGTAAATTTATGCTCTTTGTTAATG AATAAGAAATTTCTTGTCTGGGCTGTGCAACCTACCATCGAGCTCTTCGGCAATGATCCA TGCCCAACGCATAATCAACCGATGCGCTTGTCAACATTGCGAGATGCCACTGTGGATGAT TACTGCCATTACATACACATATAGCTGCCCTGATTTTCTTCAGATCATGTACATGCACAC CCAAGTTAAAGCCCAGTCTCAACCACTTTATTGCACTCTATTTAGCGGTATCCATAGTCT GTATTACCAGCA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O62489
Definition	sp\|O62489\|SRE26_CAEEL Serpentine receptor class epsilon-26 OS=Caenorhabditis elegans
Align length	48
Score (bit)	29.6
E-value	7.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918162\|Adiantum capillus-veneris mRNA, clone: YMU001_000110_C07. (492 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O62489\|SRE26_CAEEL Serpentine receptor class epsilon-26 OS=Ca... 30 7.8 >sp\|O62489\|SRE26_CAEEL Serpentine receptor class epsilon-26 OS=Caenorhabditis elegans GN=sre-26 PE=2 SV=1 Length = 359 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 320 RCACQHCEMPLWMITAITYTYSCPDFLQIMYMHTQVKAQSQPLYCTLF 463 +CA E+P +M++A SC L+I H + P++ + F Sbjct: 28 QCAISSAELPFYMLSAYVVFVSCRIMLKIQLFHDNLMYIGVPMFGSWF 75
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A9P9C1
Definition	tr\|A9P9C1\|A9P9C1_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length	40
Score (bit)	35.4
E-value	1.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918162\|Adiantum capillus-veneris mRNA, clone: YMU001_000110_C07. (492 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A9P9C1\|A9P9C1_POPTR Putative uncharacterized protein OS=Popul... 35 1.4 tr\|A9P9L8\|A9P9L8_POPTR Putative uncharacterized protein OS=Popul... 34 3.2 tr\|A9P968\|A9P968_POPTR Putative uncharacterized protein OS=Popul... 34 3.2 >tr\|A9P9C1\|A9P9C1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 137 Score = 35.4 bits (80), Expect = 1.4 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = -3 Query: 295 HCRRARWVAQPRQEISYSLTKSI-NLRQKLRFVLPNEFF 179 HCRR RW V P ++++ SI ++R ++F++P+E F Sbjct: 13 HCRRVRWRVQAPSSVVAWNCNCSICSMRASIQFIVPSEKF 52 >tr\|A9P9L8\|A9P9L8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 76 Score = 34.3 bits (77), Expect = 3.2 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 295 HCRRARWVAQPRQEISYSLTKSI-NLRQKLRFVLPNEFF 179 HCRR RW V P ++ + SI ++R ++F++P+E F Sbjct: 13 HCRRVRWRVQAPSSVVALNCNCSICSMRASIQFIVPSEKF 52 >tr\|A9P968\|A9P968_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 137 Score = 34.3 bits (77), Expect = 3.2 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 295 HCRRARW*VAQPRQEISYSLTKSI-NLRQKLRFVLPNEFF 179 HCRR RW V P ++ + SI ++R ++F++P+E F Sbjct: 13 HCRRVRWRVQAPSSVVALNCNCSICSMRASIQFIVPSEKF 52