BP918169 |
Clone id |
YMU001_000110_D02 |
Library |
YMU01 |
Length |
454 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_D02. |
Accession |
BP918169 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL685Contig1 |
Sequence |
GTACGGCTGGCCCAAATCGACCGGCATAAGCTGTATATCTTCGGGCGACTTCCTGCACCG AAGACAAAGCCTGCACTGTACTGGCAACCAAGTCCAAAACCCCCTTTCGTTCCTCTGCTT CTTTGCGAAAGCTAGCCCAGTCTAGCTCAAGAATCTCGTTCCGTAGTCTCAGCAGTGTTG CTGCGCTTACTCGGGGTATCACATCATCCTGAAGAATAACAGTCCGGACAAAACTGGCAC TCTTGATAGCAAGTGATCCTGAAACACATGGAGGGCTTGCAAAACCAATGGCCGTGACAA TTCCAGGTGAAAATCCTAACTCTTCCTTAGACTTCCTTCGGAGCATCATTGCCAGAAGAG CGGCAGTTGCTCCACCAAGTGAATGTCCAACAATCCTAAGTCTAAACCCACTATACTTGT CTATATGCTCCCTCAACGTAGGCAACTCATGGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LJR6 |
Definition |
sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana |
Align length |
80 |
Score (bit) |
33.5 |
E-value |
0.44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SLB5 |
Definition |
tr|Q9SLB5|Q9SLB5_ARATH Putative uncharacterized protein At2g42450 OS=Arabidopsis thaliana |
Align length |
143 |
Score (bit) |
141.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918169|Adiantum capillus-veneris mRNA, clone: YMU001_000110_D02. (454 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SLB5|Q9SLB5_ARATH Putative uncharacterized protein At2g4245... 141 2e-32 tr|Q651A9|Q651A9_ORYSJ Putative uncharacterized protein B1331F11... 137 2e-31 tr|Q651A8|Q651A8_ORYSJ Putative uncharacterized protein B1331F11... 137 2e-31 tr|Q0IZF7|Q0IZF7_ORYSJ Os09g0571500 protein (Fragment) OS=Oryza ... 137 2e-31 tr|B8BEU2|B8BEU2_ORYSI Putative uncharacterized protein OS=Oryza... 137 2e-31 tr|A3C1Q9|A3C1Q9_ORYSJ Putative uncharacterized protein OS=Oryza... 127 3e-28 tr|A7QVS2|A7QVS2_VITVI Chromosome chr7 scaffold_192, whole genom... 109 6e-23 tr|A9TI23|A9TI23_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14 tr|A9RJC4|A9RJC4_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|A9T5M0|A9T5M0_PHYPA Predicted protein OS=Physcomitrella paten... 59 9e-08 tr|Q8W4L6|Q8W4L6_ARATH Putative uncharacterized protein Z97340.1... 53 7e-06 tr|B8BYE1|B8BYE1_THAPS Predicted protein OS=Thalassiosira pseudo... 51 3e-05 tr|A7P6G7|A7P6G7_VITVI Chromosome chr9 scaffold_7, whole genome ... 51 3e-05 tr|Q8L570|Q8L570_ORYSJ cDNA clone:J023108O19, full insert sequen... 50 4e-05 tr|B8A6S4|B8A6S4_ORYSI Putative uncharacterized protein OS=Oryza... 50 4e-05 tr|A2ZSB4|A2ZSB4_ORYSJ Putative uncharacterized protein OS=Oryza... 50 4e-05 tr|A8JJQ5|A8JJQ5_CHLRE Predicted protein (Fragment) OS=Chlamydom... 50 6e-05 tr|A8I7M1|A8I7M1_CHLRE Predicted protein OS=Chlamydomonas reinha... 50 6e-05 tr|Q6K832|Q6K832_ORYSJ Os02g0780700 protein OS=Oryza sativa subs... 49 1e-04 tr|B8AJI7|B8AJI7_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|Q2R051|Q2R051_ORYSJ Lipase family protein OS=Oryza sativa sub... 49 1e-04 tr|A2ZGK2|A2ZGK2_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A9T8R2|A9T8R2_PHYPA Predicted protein OS=Physcomitrella paten... 48 2e-04 tr|A7Q8H7|A7Q8H7_VITVI Chromosome chr5 scaffold_64, whole genome... 48 3e-04 tr|Q9AUR1|Q9AUR1_ORYSA Putative calmodulin-binding heat-shock pr... 47 4e-04 tr|A9SPW1|A9SPW1_PHYPA Predicted protein OS=Physcomitrella paten... 47 4e-04 tr|A3ABY9|A3ABY9_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|O23456|O23456_ARATH Putative uncharacterized protein AT4g1607... 43 0.007 tr|B8C8Y9|B8C8Y9_THAPS Predicted protein OS=Thalassiosira pseudo... 43 0.007 tr|B8C8Y0|B8C8Y0_THAPS Predicted protein OS=Thalassiosira pseudo... 43 0.007
>tr|Q9SLB5|Q9SLB5_ARATH Putative uncharacterized protein At2g42450 OS=Arabidopsis thaliana GN=At2g42450 PE=2 SV=1 Length = 508
Score = 141 bits (355), Expect = 2e-32 Identities = 72/143 (50%), Positives = 99/143 (69%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASP 272 HEL T+R + KY G++LR+VGHS L++ +EELGF I++A+G+A+P Sbjct: 250 HELQTIRRCLAKYEGYKLRLVGHSLGGAIASLMAIMLKKMPREELGFDAEIISAVGYATP 309
Query: 271 PCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVLD 92 PCVS LA + FV T+++QDD+IPR+SAA+L RLRNEIL+ DW S E EE K VLD Sbjct: 310 PCVSKELAENCSEFVTTIVMQDDIIPRLSAASLARLRNEILQTDWTSV-IEKEEWKNVLD 368
Query: 91 LVASTVQALSSVQEVARRYTAYA 23 LV + Q ++SVQ+VAR+ + YA Sbjct: 369 LVTNAKQVVTSVQDVARKVSDYA 391
>tr|Q651A9|Q651A9_ORYSJ Putative uncharacterized protein B1331F11.10-1 OS=Oryza sativa subsp. japonica GN=B1331F11.10-1 PE=4 SV=1 Length = 518
Score = 137 bits (346), Expect = 2e-31 Identities = 69/143 (48%), Positives = 100/143 (69%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASP 272 HEL +R+ ++K+ ++LR+VGHS LR+KSKEELGFSP +++A+G+ +P Sbjct: 268 HELGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGYGTP 327
Query: 271 PCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVLD 92 PCVS +A AS+V TV+LQDD+IPR+SAA+L RLR EIL+ DW S E E+ K ++D Sbjct: 328 PCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSV-LEKEDWKHIVD 386
Query: 91 LVASTVQALSSVQEVARRYTAYA 23 +V + +SS+Q+VAR+ YA Sbjct: 387 IVTNAKLVVSSIQDVARKLADYA 409
>tr|Q651A8|Q651A8_ORYSJ Putative uncharacterized protein B1331F11.10-2 OS=Oryza sativa subsp. japonica GN=B1331F11.10-2 PE=4 SV=1 Length = 328
Score = 137 bits (346), Expect = 2e-31 Identities = 69/143 (48%), Positives = 100/143 (69%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASP 272 HEL +R+ ++K+ ++LR+VGHS LR+KSKEELGFSP +++A+G+ +P Sbjct: 78 HELGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGYGTP 137
Query: 271 PCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVLD 92 PCVS +A AS+V TV+LQDD+IPR+SAA+L RLR EIL+ DW S E E+ K ++D Sbjct: 138 PCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSV-LEKEDWKHIVD 196
Query: 91 LVASTVQALSSVQEVARRYTAYA 23 +V + +SS+Q+VAR+ YA Sbjct: 197 IVTNAKLVVSSIQDVARKLADYA 219
>tr|Q0IZF7|Q0IZF7_ORYSJ Os09g0571500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os09g0571500 PE=4 SV=1 Length = 382
Score = 137 bits (346), Expect = 2e-31 Identities = 69/143 (48%), Positives = 100/143 (69%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASP 272 HEL +R+ ++K+ ++LR+VGHS LR+KSKEELGFSP +++A+G+ +P Sbjct: 132 HELGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGYGTP 191
Query: 271 PCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVLD 92 PCVS +A AS+V TV+LQDD+IPR+SAA+L RLR EIL+ DW S E E+ K ++D Sbjct: 192 PCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSV-LEKEDWKHIVD 250
Query: 91 LVASTVQALSSVQEVARRYTAYA 23 +V + +SS+Q+VAR+ YA Sbjct: 251 IVTNAKLVVSSIQDVARKLADYA 273
>tr|B8BEU2|B8BEU2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32476 PE=4 SV=1 Length = 328
Score = 137 bits (346), Expect = 2e-31 Identities = 69/143 (48%), Positives = 100/143 (69%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASP 272 HEL +R+ ++K+ ++LR+VGHS LR+KSKEELGFSP +++A+G+ +P Sbjct: 78 HELGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGYGTP 137
Query: 271 PCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVLD 92 PCVS +A AS+V TV+LQDD+IPR+SAA+L RLR EIL+ DW S E E+ K ++D Sbjct: 138 PCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSV-LEKEDWKHIVD 196
Query: 91 LVASTVQALSSVQEVARRYTAYA 23 +V + +SS+Q+VAR+ YA Sbjct: 197 IVTNAKLVVSSIQDVARKLADYA 219
>tr|A3C1Q9|A3C1Q9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029231 PE=4 SV=1 Length = 442
Score = 127 bits (319), Expect = 3e-28 Identities = 67/144 (46%), Positives = 96/144 (66%) Frame = -1
Query: 454 VHELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFAS 275 V++L T + ++LR+VGHS LR+KSKEELGFSP +++A+G+ + Sbjct: 191 VYDLVTDLIALSDKKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVISAVGYGT 250
Query: 274 PPCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVL 95 PPCVS +A AS+V TV+LQDD+IPR+SAA+L RLR EIL+ DW S E E+ K ++ Sbjct: 251 PPCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSV-LEKEDWKHIV 309
Query: 94 DLVASTVQALSSVQEVARRYTAYA 23 D+V + +SS+Q+VAR+ YA Sbjct: 310 DIVTNAKLVVSSIQDVARKLADYA 333
>tr|A7QVS2|A7QVS2_VITVI Chromosome chr7 scaffold_192, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007497001 PE=4 SV=1 Length = 675
Score = 109 bits (273), Expect = 6e-23 Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 7/150 (4%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASP 272 HE+ TLR+ ++K+ GFRLR+VGHS L +KS+EELGFSP IV+AIGFA+ Sbjct: 404 HEMGTLRKCLEKHEGFRLRLVGHSLGGATASLLAIMLHKKSREELGFSPDIVSAIGFATS 463
Query: 271 PCVSGSLAIKSASFVRTVILQDDVIPRVSAATL--LRLRNEI-----LELDWASFRKEAE 113 PCVS LA + +V TV++QDD+IPR+S L L + +E + + W + E E Sbjct: 464 PCVSKELAESCSDYVTTVVVQDDIIPRLSNFHLNCLNVDDETVGDYNVGVVWMTV-LEKE 522
Query: 112 ERKGVLDLVASTVQALSSVQEVARRYTAYA 23 + + V+ LV + Q ++SVQ+VA + YA Sbjct: 523 DWRSVMGLVTNAKQVVTSVQDVASKLADYA 552
>tr|A9TI23|A9TI23_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170195 PE=4 SV=1 Length = 496
Score = 82.0 bits (201), Expect = 1e-14 Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 6/138 (4%) Frame = -1
Query: 451 HELPTLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSP------GIVTA 290 +E TL+ + + GFRL + GHS L+ S EE S ++T Sbjct: 163 NEGQTLQNVLKENEGFRLVLAGHSMGAGTAALLGLLLKETSAEEANVSKILKIPNEMITC 222
Query: 289 IGFASPPCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEE 110 GF SPPCV+ LAI S SF+ V+LQDDV+ RVS A L LR E+ + +W+ KE Sbjct: 223 WGFGSPPCVNFELAIAS-SFIHNVVLQDDVVSRVSPAALEDLRLEVAQTEWSQAFKEGST 281
Query: 109 RKGVLDLVASTVQALSSV 56 ++ +D+V T Q +S++ Sbjct: 282 QRQFVDMVHETTQRISAL 299
>tr|A9RJC4|A9RJC4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159416 PE=4 SV=1 Length = 750
Score = 72.0 bits (175), Expect = 1e-11 Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 7/145 (4%) Frame = -1
Query: 439 TLREHIDKYSGFRLRIVGHSXXXXXXXXXXXXLRR-------KSKEELGFSPGIVTAIGF 281 TL + + + G+ + +VGHS LR ++ L P ++T GF Sbjct: 356 TLHDVLQENPGYSMVVVGHSLGAGTAALLSLLLRETESKPSGEASRVLNIPPVMITCWGF 415
Query: 280 ASPPCVSGSLAIKSASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKG 101 PPCV +LA S+SF++ ++LQDDV+ RV+ A L LR+E+ + DW+ K+ ++ Sbjct: 416 GCPPCVDLNLA-NSSSFIKNIVLQDDVVARVTPAALEDLRSEMQQTDWSQAFKDGTTKRL 474
Query: 100 VLDLVASTVQALSSVQEVARRYTAY 26 V++++ +T + + A Y Sbjct: 475 VVEMLQATAERFQQKEVSAETQQLY 499
>tr|A9T5M0|A9T5M0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191863 PE=4 SV=1 Length = 641
Score = 59.3 bits (142), Expect = 9e-08 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 1/128 (0%) Frame = -1
Query: 421 DKYSGFRLRIVGHSXXXXXXXXXXXXLRRKSKEELGFSPGIVTAIGFASPPCVSGSLAIK 242 D Y +++++VGHS LR + G + FA C++ LA Sbjct: 246 DDYPTYQIKVVGHSLGGGTAALLTYILRERQPL------GSTKCVSFAPAACMTWELAES 299
Query: 241 SASFVRTVILQDDVIPRVSAATLLRLRNEILELDWASFRKEAEERKGVLDLVASTVQALS 62 ASFV TVI D++P +A+L LR E+ WA+ +E ER +L V +V ALS Sbjct: 300 GASFVTTVINGSDLVPTFCSASLDDLRAEVTASAWANDFREQIERTRILRTVYRSVTALS 359
Query: 61 S-VQEVAR 41 S +Q +A+ Sbjct: 360 SRIQSLAK 367
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