BP918174 |
Clone id |
YMU001_000110_D07 |
Library |
YMU01 |
Length |
494 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_D07. |
Accession |
BP918174 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL411Contig1 |
Sequence |
CAGGGCGAGTGACCTGAGAGAGGAGAAATAGTTGTGCCCGTCCCTCCTCCTCCTCCGCTG GTACAGACTACAGAGATGGCGGAAGTTGAGGTAGATACGCCTATGGAGCCTTTTGGAGAG GGTTCTAGCAGCGACGCCGGCCCTGCAGCCAAACGCCCCAAGCGATTCGAGATCAAGAAA TGGAACGCAGTCGCTCTTTGGGCCTGGGATATTGTTGTTGACAATTGTGCTATTTGTCGC AACCACATTATGGATTTATGTATTGAGTGCCAAGCCAATCAGGCTAGCGCTACAAGTGAG GAGTGTACTGTGGCATGGAGTGTCTGCAACCATGCATTTCACTTTCACTGTATCAGCAGA TGGCTGAAGCCACGGCAAGTTTGTCCGCTAGATAATAGCGAATGGGAGTTCCAAAAGTAT GGGCGTTGAGGGCATCGCCTCAAAATTAGCTAATGGAATTGTTGCTTAGCATTGCATAGA TTGTTCTATCTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q940X7 |
Definition |
sp|Q940X7|RBX1A_ARATH RING-box protein 1a OS=Arabidopsis thaliana |
Align length |
117 |
Score (bit) |
210.0 |
E-value |
3.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2PYP4 |
Definition |
tr|Q2PYP4|Q2PYP4_ARAHY RING-box protein OS=Arachis hypogaea |
Align length |
116 |
Score (bit) |
224.0 |
E-value |
2.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918174|Adiantum capillus-veneris mRNA, clone: YMU001_000110_D07. (494 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2PYP4|Q2PYP4_ARAHY RING-box protein OS=Arachis hypogaea GN=R... 224 2e-57 tr|A0ELV2|A0ELV2_PETIN RBX1-like protein OS=Petunia integrifolia... 223 5e-57 tr|A9P251|A9P251_PICSI Putative uncharacterized protein OS=Picea... 221 1e-56 tr|A9NSB3|A9NSB3_PICSI Putative uncharacterized protein OS=Picea... 219 4e-56 tr|A9NMC5|A9NMC5_PICSI Putative uncharacterized protein OS=Picea... 218 1e-55 tr|A9SV80|A9SV80_PHYPA Predicted protein OS=Physcomitrella paten... 217 3e-55 tr|Q657Y3|Q657Y3_ORYSJ Putative ring-box protein OS=Oryza sativa... 215 1e-54 tr|Q0JRD5|Q0JRD5_ORYSJ cDNA clone:001-025-F02, full insert seque... 215 1e-54 tr|A5ARK4|A5ARK4_VITVI Putative uncharacterized protein (Chromos... 214 1e-54 tr|Q287V9|Q287V9_OLIPU Putative ring-box Roc1/Rbx1/Hrt1 protein ... 211 1e-53 tr|A9S247|A9S247_PHYPA Predicted protein OS=Physcomitrella paten... 211 1e-53 tr|Q7Y042|Q7Y042_POPTO Ring box protein OS=Populus tomentosa PE=... 211 2e-53 tr|A9P8V0|A9P8V0_POPTR Putative uncharacterized protein OS=Popul... 207 2e-52 tr|B6T6J8|B6T6J8_MAIZE RING-box protein 1a OS=Zea mays PE=2 SV=1 206 6e-52 tr|B4FV30|B4FV30_MAIZE Putative uncharacterized protein OS=Zea m... 202 7e-51 tr|B4FD56|B4FD56_MAIZE Putative uncharacterized protein OS=Zea m... 201 1e-50 tr|A7SEK8|A7SEK8_NEMVE Predicted protein OS=Nematostella vectens... 201 1e-50 tr|Q8S3S0|Q8S3S0_ORYSJ Putative ring box-1 protein (Putative RIN... 201 2e-50 tr|B5FY04|B5FY04_TAEGU Putative RBX1 protein OS=Taeniopygia gutt... 200 3e-50 tr|Q498D8|Q498D8_RAT Ring-box 1 OS=Rattus norvegicus GN=Rbx1 PE=... 200 3e-50 tr|Q2PFW7|Q2PFW7_MACFA Putative uncharacterized protein OS=Macac... 200 3e-50 tr|Q2HJI9|Q2HJI9_BOVIN Ring-box 1 OS=Bos taurus GN=RBX1 PE=4 SV=1 200 3e-50 tr|B2RDY1|B2RDY1_HUMAN cDNA, FLJ96824, Homo sapiens ring-box 1 (... 200 3e-50 tr|A7E405|A7E405_SCLS1 RING-box protein 1 OS=Sclerotinia sclerot... 200 3e-50 tr|Q0UGK9|Q0UGK9_PHANO Putative uncharacterized protein OS=Phaeo... 198 1e-49 tr|A4RM28|A4RM28_MAGGR Ring-box 1 OS=Magnaporthe grisea GN=MGG_0... 198 1e-49 tr|Q642J6|Q642J6_DANRE Rbx1 protein (Fragment) OS=Danio rerio GN... 198 1e-49 tr|Q32Q48|Q32Q48_DANRE Rbx1 protein (Fragment) OS=Danio rerio GN... 198 1e-49 tr|A4FUL3|A4FUL3_DANRE Rbx1 protein OS=Danio rerio GN=rbx1 PE=4 ... 198 1e-49 tr|A2VCY6|A2VCY6_DANRE Rbx1 protein (Fragment) OS=Danio rerio GN... 198 1e-49
>tr|Q2PYP4|Q2PYP4_ARAHY RING-box protein OS=Arachis hypogaea GN=RBX1a PE=4 SV=1 Length = 116
Score = 224 bits (571), Expect = 2e-57 Identities = 102/116 (87%), Positives = 107/116 (92%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPAAKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 255 MA ++ D PM P GE SSS AGP++K+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD Sbjct: 1 MATLDSDVPMVPAGEPSSS-AGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 59
Query: 256 LCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 LCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 60 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 115
>tr|A0ELV2|A0ELV2_PETIN RBX1-like protein OS=Petunia integrifolia subsp. inflata GN=RBX1 PE=4 SV=1 Length = 116
Score = 223 bits (567), Expect = 5e-57 Identities = 99/116 (85%), Positives = 105/116 (90%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPAAKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 255 MA ++D PM P GEGS+ GP+ K+PKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMD Sbjct: 1 MASPDIDVPMVPAGEGSTG-VGPSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMD 59
Query: 256 LCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 LCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 60 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 115
>tr|A9P251|A9P251_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 119
Score = 221 bits (563), Expect = 1e-56 Identities = 102/118 (86%), Positives = 106/118 (89%), Gaps = 2/118 (1%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPA--AKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHI 249 MA +VD EP GEGSSS AGP+ +K+ KRFEIKKWNAVALWAWDIVVDNCAICRNHI Sbjct: 1 MASTDVDMIPEPTGEGSSSQAGPSTSSKKIKRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
Query: 250 MDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 MDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 61 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 118
>tr|A9NSB3|A9NSB3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 119
Score = 219 bits (559), Expect = 4e-56 Identities = 101/118 (85%), Positives = 106/118 (89%), Gaps = 2/118 (1%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPA--AKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHI 249 MA +V+ EP GEGSSS AGP+ +K+ KRFEIKKWNAVALWAWDIVVDNCAICRNHI Sbjct: 1 MASTDVEMIPEPTGEGSSSQAGPSTSSKKIKRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
Query: 250 MDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 MDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 61 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 118
>tr|A9NMC5|A9NMC5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 119
Score = 218 bits (555), Expect = 1e-55 Identities = 99/118 (83%), Positives = 104/118 (88%), Gaps = 2/118 (1%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPAA--KRPKRFEIKKWNAVALWAWDIVVDNCAICRNHI 249 MA ++D P GEGSS+ AGP+ K+ KRFEIKKWNAVALWAWDIVVDNCAICRNHI Sbjct: 1 MASTDIDMTPVPSGEGSSAQAGPSTSTKKAKRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
Query: 250 MDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 MDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 61 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 118
>tr|A9SV80|A9SV80_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_216076 PE=4 SV=1 Length = 120
Score = 217 bits (552), Expect = 3e-55 Identities = 99/120 (82%), Positives = 104/120 (86%), Gaps = 3/120 (2%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSS---SDAGPAAKRPKRFEIKKWNAVALWAWDIVVDNCAICRNH 246 MA ++ + P GEGSS S + +KRPKRFEIKKWNAVALWAWDIVVDNCAICRNH Sbjct: 1 MAAIDTEMATGPTGEGSSAGVSSSSAVSKRPKRFEIKKWNAVALWAWDIVVDNCAICRNH 60
Query: 247 IMDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYGR 426 IMDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYGR Sbjct: 61 IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGR 120
>tr|Q657Y3|Q657Y3_ORYSJ Putative ring-box protein OS=Oryza sativa subsp. japonica GN=P0005A05.23 PE=4 SV=1 Length = 123
Score = 215 bits (547), Expect = 1e-54 Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 7/121 (5%) Frame = +1
Query: 82 EVEVDTPMEPF------GEGSSSDAGPAAKRP-KRFEIKKWNAVALWAWDIVVDNCAICR 240 E +++ P P GEGSSS AGP++++P KRFEIKKWNAVALWAWDIVVDNCAICR Sbjct: 2 ETDINAPPPPAPAPAGAGEGSSSAAGPSSRKPNKRFEIKKWNAVALWAWDIVVDNCAICR 61
Query: 241 NHIMDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKY 420 NHIMDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKY Sbjct: 62 NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY 121
Query: 421 G 423 G Sbjct: 122 G 122
>tr|Q0JRD5|Q0JRD5_ORYSJ cDNA clone:001-025-F02, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0106800 PE=2 SV=1 Length = 126
Score = 215 bits (547), Expect = 1e-54 Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 7/121 (5%) Frame = +1
Query: 82 EVEVDTPMEPF------GEGSSSDAGPAAKRP-KRFEIKKWNAVALWAWDIVVDNCAICR 240 E +++ P P GEGSSS AGP++++P KRFEIKKWNAVALWAWDIVVDNCAICR Sbjct: 5 ETDINAPPPPAPAPAGAGEGSSSAAGPSSRKPNKRFEIKKWNAVALWAWDIVVDNCAICR 64
Query: 241 NHIMDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKY 420 NHIMDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKY Sbjct: 65 NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY 124
Query: 421 G 423 G Sbjct: 125 G 125
>tr|A5ARK4|A5ARK4_VITVI Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00016431001 PE=4 SV=1 Length = 120
Score = 214 bits (546), Expect = 1e-54 Identities = 100/120 (83%), Positives = 105/120 (87%), Gaps = 4/120 (3%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPAA----KRPKRFEIKKWNAVALWAWDIVVDNCAICRN 243 MA ++ D M P GE S S AGP++ K+PKRFEIKKWNAVALWAWDIVVDNCAICRN Sbjct: 1 MASLDSDVTMVPVGEPSGS-AGPSSSSSCKKPKRFEIKKWNAVALWAWDIVVDNCAICRN 59
Query: 244 HIMDLCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 HIMDLCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 60 HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 119
>tr|Q287V9|Q287V9_OLIPU Putative ring-box Roc1/Rbx1/Hrt1 protein OS=Olimarabidopsis pumila GN=Op_42830 PE=4 SV=1 Length = 115
Score = 211 bits (538), Expect = 1e-53 Identities = 97/116 (83%), Positives = 102/116 (87%) Frame = +1
Query: 76 MAEVEVDTPMEPFGEGSSSDAGPAAKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 255 MA ++ D PM P GE SSS +K+ KRFEIKKW+AVALWAWDIVVDNCAICRNHIMD Sbjct: 1 MASLDSDVPMIPAGEASSSTV--PSKKVKRFEIKKWSAVALWAWDIVVDNCAICRNHIMD 58
Query: 256 LCIECQANQASATSEECTVAWSVCNHAFHFHCISRWLKPRQVCPLDNSEWEFQKYG 423 LCIECQANQASATSEECTVAW VCNHAFHFHCISRWLK RQVCPLDNSEWEFQKYG Sbjct: 59 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 114
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