BP918176
Clone id YMU001_000110_D09
Library
Length 446
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCATCCGCAGAGGGCCGTCGATAGTTGCGACGCTTTTGACATTGCGTCAACTAGTTTGA
GGAGTTTTCCTGAAGGTTTATGTAGTACGGGATTGGATATGGATGAGAGACCGCAACAAA
CATTTATCTCGTCAGATGAGTTAAACCCCCTCTCAGTGCAGGGGAGGTGATACAAGAAAG
GTTACCTTCAAGGACCCAATGTGCGAAACAGGTTTAAGGAGTCCAGATTTATGGACTTCA
TCAGGAGGTTAGAAGGTAAAACCAGTTTTCAGGGTTCATCTTATATATATAAGGCGGTTT
TCTTGACTACACCTTCCGCCATCTATTCGTCCCCCCTGCTTCCTCTTCTAGCATGGCTCC
TTACAGCAGTCCAAATACGTTGCCCTCCCCCTAGCTTTCCCTTATTTGCTTCTCTTTTAC
CCTCGTCTGTATTTTATACACATCTC
■■Homology search results ■■ -
sp_hit_id Q8SPX7
Definition sp|Q8SPX7|CRYL1_BOVIN Lambda-crystallin homolog OS=Bos taurus
Align length 45
Score (bit) 31.2
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918176|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_D09.
(433 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8SPX7|CRYL1_BOVIN Lambda-crystallin homolog OS=Bos taurus GN... 31 1.9
sp|Q5RDZ2|CRYL1_PONAB Lambda-crystallin homolog OS=Pongo abelii ... 30 4.3
sp|Q9Y2S2|CRYL1_HUMAN Lambda-crystallin homolog OS=Homo sapiens ... 30 4.3
sp|P14755|CRYL1_RABIT Lambda-crystallin OS=Oryctolagus cuniculus... 29 7.3
sp|Q99KP3|CRYL1_MOUSE Lambda-crystallin homolog OS=Mus musculus ... 29 7.3

>sp|Q8SPX7|CRYL1_BOVIN Lambda-crystallin homolog OS=Bos taurus
GN=CRYL1 PE=2 SV=3
Length = 321

Score = 31.2 bits (69), Expect = 1.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2

Query: 201 HWVLEGNLSCITSPALRGGLTHLTR*MFVAVSHPYPIPYYINLQE 67
H +L + SC+ L GL H+ + + V+HP PYY+ L E
Sbjct: 119 HVILSSSSSCLLPSKLFAGLAHVKQCL---VAHPVNPPYYVPLVE 160


>sp|Q5RDZ2|CRYL1_PONAB Lambda-crystallin homolog OS=Pongo abelii
GN=CRYL1 PE=2 SV=3
Length = 319

Score = 30.0 bits (66), Expect = 4.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2

Query: 195 VLEGNLSCITSPALRGGLTHLTR*MFVAVSHPYPIPYYINLQE 67
+L + SC+ L GL H+ + V+HP PYYI L E
Sbjct: 118 ILSSSTSCLMPSKLFAGLVHVKQ---CIVAHPVNPPYYIPLVE 157


>sp|Q9Y2S2|CRYL1_HUMAN Lambda-crystallin homolog OS=Homo sapiens
GN=CRYL1 PE=2 SV=3
Length = 319

Score = 30.0 bits (66), Expect = 4.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2

Query: 195 VLEGNLSCITSPALRGGLTHLTR*MFVAVSHPYPIPYYINLQE 67
+L + SC+ L GL H+ + V+HP PYYI L E
Sbjct: 118 ILSSSTSCLMPSKLFAGLVHVKQ---CIVAHPVNPPYYIPLVE 157


>sp|P14755|CRYL1_RABIT Lambda-crystallin OS=Oryctolagus cuniculus
GN=CRYL1 PE=1 SV=2
Length = 320

Score = 29.3 bits (64), Expect = 7.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2

Query: 195 VLEGNLSCITSPALRGGLTHLTR*MFVAVSHPYPIPYYINLQE 67
VL + SC+ L GL H+ + V+HP PYYI L E
Sbjct: 118 VLSSSSSCLLPSKLFTGLAHVKQ---CIVAHPVNPPYYIPLVE 157


>sp|Q99KP3|CRYL1_MOUSE Lambda-crystallin homolog OS=Mus musculus
GN=Cryl1 PE=2 SV=3
Length = 319

Score = 29.3 bits (64), Expect = 7.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2

Query: 195 VLEGNLSCITSPALRGGLTHLTR*MFVAVSHPYPIPYYINLQE 67
+L + SC+ L GL H+ + V+HP PYY+ L E
Sbjct: 118 ILSSSSSCLLPSKLFSGLAHVKQ---CIVAHPVNPPYYVPLVE 157


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918176|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_D09.
(433 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******