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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918198
Clone id YMU001_000110_F09
Library
Length 556
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTGCCGCGGGCAC
GACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCCC
TCAATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCA
GCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACGTACTACCGCCCCAGG
TGGCGAAGAGCCGACATCGAGGTGCCAAATCTTCCCGTCGATGTGAACTCTTGGGGAAGA
TCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTTGGAAC
CGTCGGATCACTAAGGCCGACTTACGTCCCTGCTCGACTGGTAGGTCTCGCAGTCAAGCT
CCCTTCTGCCTTTGCACTCGTAGGCTGATTTCCGTCCAGCCTGAGGAAACCTTTGCGCGC
CTCCGTTACTCTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGGGACTGTCTCTT
GGTCCGTAATTCTTGA
■■Homology search results ■■ -
sp_hit_id Q9PLI5
Definition sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum
Align length 80
Score (bit) 88.2
E-value 2.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918198|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_F09.
         (556 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi...    88   2e-17
sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal regio...    35   0.32 
sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia ...    32   2.1  
sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolytic...    30   8.0  

>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
           muridarum GN=TC_0114 PE=4 SV=2
          Length = 122

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 45/80 (56%), Positives = 48/80 (60%)
 Frame = +3

Query: 132 APAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKSSRRCXXXXXXXXX 311
           AP  D D+TVSRR EPSSRTAL+GEQPNPWD+L PQ A SRHRGAK  RR          
Sbjct: 43  APTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLL 102

Query: 312 XXXXXXXXXRRPFHLEPSDH 371
                    RR FH  P DH
Sbjct: 103 SPEYLLSVKRRRFHFPPPDH 122


>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region
           16 protein homolog OS=Mus musculus GN=Wbscr16 PE=2 SV=1
          Length = 461

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = -1

Query: 139 AGARALRGPFPSTRGPGRTHLWCTSCRARGKRWVAKCGAD 20
           A ARALRGP P    P R H W  + R+R +R  A+  AD
Sbjct: 3   AAARALRGPRPRWPTPAREH-WTPAGRSRSRREAAEAEAD 41


>sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia
           pseudotsugata multicapsid polyhedrosis virus GN=ORF58
           PE=4 SV=1
          Length = 378

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = -2

Query: 372 SDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKIWHLDVGSSPPGAVVRPKGWAVRPLK 193
           S+P + S  + A  +  TLG    +  RV+       L  G +PPG ++ P    V+ + 
Sbjct: 246 SNPFIISENSSASVVLRTLGKCPDNPERVNC----CKLSYGGAPPGHLMCPPRAIVKKIY 301

Query: 192 RYVSWVQN 169
           RYV+W  N
Sbjct: 302 RYVNWASN 309


>sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolyticus
           (strain ATCC 43068 / 11B) GN=lexA PE=3 SV=1
          Length = 275

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 501 ASQRVTEARKGFLRLDGNQPTSAKAEGSLTARPTSRAG 388
           A Q +   RKGFLR D N+P + +   + +A P + AG
Sbjct: 89  AHQLMVLQRKGFLRRDPNRPRAVEIRSAESAVPDASAG 126
tr_hit_id B6G1S6
Definition tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clostridium hiranonis DSM 13275
Align length 83
Score (bit) 144.0
E-value 1.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918198|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_F09.
         (556 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost...   144   1e-47
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste...   179   7e-44
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin...   178   2e-43
tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil...   161   3e-38
tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin...   157   5e-37
tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost...   146   8e-34
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost...   146   8e-34
tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen...   146   8e-34
tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost...   146   8e-34
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost...   146   8e-34
tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost...   142   1e-32
tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen...   142   1e-32
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost...   142   2e-32
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost...   142   2e-32
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost...   142   2e-32
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost...   142   2e-32
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost...   142   2e-32
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost...   142   2e-32
tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost...   139   1e-31
tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo...   139   1e-31
tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost...   137   4e-31
tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep...   137   5e-31
tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph...   134   4e-30
tr|A8R9P5|A8R9P5_9FIRM Putative uncharacterized protein OS=Eubac...   132   1e-29
tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep...   130   4e-29
tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep...   130   4e-29
tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep...   129   1e-28
tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac...   128   2e-28
tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost...   124   3e-27
tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost...   124   3e-27

>tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein
           OS=Clostridium hiranonis DSM 13275 GN=CLOHIR_02084 PE=4
           SV=1
          Length = 169

 Score =  144 bits (364), Expect(2) = 1e-47
 Identities = 69/83 (83%), Positives = 73/83 (87%)
 Frame = -2

Query: 381 VGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKIWHLDVGSSPPGAVVRPKGWAVR 202
           VGLSDP V SGRA+AQRIK TLGITG S PRVHIDG++WHLDVGSS PGAVV PKGWAVR
Sbjct: 87  VGLSDPVVLSGRAIAQRIKATLGITGLSPPRVHIDGEVWHLDVGSSHPGAVVGPKGWAVR 146

Query: 201 PLKRYVSWVQNVVRQFGPYPVRA 133
           PLK Y SWVQNVVRQFGPYP +A
Sbjct: 147 PLKWYASWVQNVVRQFGPYPSQA 169



 Score = 68.9 bits (167), Expect(2) = 1e-47
 Identities = 32/46 (69%), Positives = 35/46 (76%)
 Frame = -1

Query: 535 TVPGRQFLWGVGLPKSNGGAQRFPQAGRKSAYECKGRRELDCETYQ 398
           T+ G QF WG  LPK NGGAQRF Q GRKS  ECKG RELDC+TY+
Sbjct: 36  TLSGGQFDWGGRLPKGNGGAQRFSQHGRKSCTECKGIRELDCKTYR 81


>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria
           monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1
          Length = 112

 Score =  179 bits (455), Expect = 7e-44
 Identities = 88/111 (79%), Positives = 94/111 (84%)
 Frame = -2

Query: 459 LDGNQPTSAKAEGSLTARPTSRAGT*VGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 280
           +DGN   S KA+GSLTAR TSRAGT VGLSDP VP GRA+AQRIK T GITG S PRVHI
Sbjct: 1   MDGNHSQSVKAQGSLTARLTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHI 60

Query: 279 DGKIWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRALE 127
           DG++WHLDVGSS PGAVV PKGWAVRPLKR+ SWVQNVVRQFGPYP RA E
Sbjct: 61  DGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRAQE 111


>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4
           SV=1
          Length = 109

 Score =  178 bits (452), Expect = 2e-43
 Identities = 88/109 (80%), Positives = 91/109 (83%)
 Frame = -2

Query: 459 LDGNQPTSAKAEGSLTARPTSRAGT*VGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 280
           +DGN P SAKAEGSLTA PT  AGT VGLSDP V SG A+AQRIK TLGITG S PRVHI
Sbjct: 1   MDGNHPKSAKAEGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHI 60

Query: 279 DGKIWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 133
           DG +WHLDVGSS PGAVV PKGWAVRPLKRY SWVQNVVRQFGPYP  A
Sbjct: 61  DGVVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 109


>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus
           megaterium PE=4 SV=1
          Length = 95

 Score =  161 bits (407), Expect = 3e-38
 Identities = 77/92 (83%), Positives = 81/92 (88%)
 Frame = -2

Query: 417 LTARPTSRAGT*VGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKIWHLDVGSSPP 238
           +TAR TSRAGT VGLSDP VP GRA+AQRIK T GITG S PRVHIDG++WHLDVGSS P
Sbjct: 1   MTARTTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDVGSSHP 60

Query: 237 GAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYP 142
           GAVV PKGWAVRPLKRY SWVQNVVRQFGPYP
Sbjct: 61  GAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 92


>tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04125 PE=4
           SV=1
          Length = 108

 Score =  157 bits (396), Expect = 5e-37
 Identities = 78/100 (78%), Positives = 82/100 (82%)
 Frame = -2

Query: 432 KAEGSLTARPTSRAGT*VGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKIWHLDV 253
           ++ GSLTA PT  AGT VGLSDP V SG A+AQRIK TLGITG S PRVHIDG +WHLDV
Sbjct: 9   QSRGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 68

Query: 252 GSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 133
           GSS PGAVV  KGWAVRPLKRY SWVQNVVRQFGPYP  A
Sbjct: 69  GSSHPGAVVGLKGWAVRPLKRYASWVQNVVRQFGPYPAWA 108


>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein
           OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4
           SV=1
          Length = 213

 Score =  146 bits (368), Expect = 8e-34
 Identities = 71/98 (72%), Positives = 77/98 (78%)
 Frame = +1

Query: 244 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADLRPCSTGRSRSQAP 423
           RRADIEVPNLPVDV+SWGRSACYP  +FYPLSDGPS  N RITK D RPCST   RSQAP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 424 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 537
           FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62  FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein
           OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4
           SV=1
          Length = 213

 Score =  146 bits (368), Expect = 8e-34
 Identities = 71/98 (72%), Positives = 77/98 (78%)
 Frame = +1

Query: 244 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADLRPCSTGRSRSQAP 423
           RRADIEVPNLPVDV+SWGRSACYP  +FYPLSDGPS  N RITK D RPCST   RSQAP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 424 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 537
           FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62  FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment)
           OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4
           SV=1
          Length = 107

 Score =  146 bits (368), Expect = 8e-34
 Identities = 71/98 (72%), Positives = 77/98 (78%)
 Frame = +1

Query: 244 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADLRPCSTGRSRSQAP 423
           RRADIEVPNLPVDV+SWGRSACYP  +FYPLSDGPS  N RITK D RPCST   RSQAP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 424 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 537
           FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62  FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4
           SV=1
          Length = 210

 Score =  146 bits (368), Expect = 8e-34
 Identities = 71/98 (72%), Positives = 77/98 (78%)
 Frame = +1

Query: 244 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADLRPCSTGRSRSQAP 423
           RRADIEVPNLPVDV+SWGRSACYP  +FYPLSDGPS  N RITK D RPCST   RSQAP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 424 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 537
           FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62  FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4
           SV=1
          Length = 213

 Score =  146 bits (368), Expect = 8e-34
 Identities = 71/98 (72%), Positives = 77/98 (78%)
 Frame = +1

Query: 244 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADLRPCSTGRSRSQAP 423
           RRADIEVPNLPVDV+SWGRSACYP  +FYPLSDGPS  N RITK D RPCST   RSQAP
Sbjct: 2   RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 424 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 537
           FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62  FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99