BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918208|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_G07.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49374|HGT1_KLULA High-affinity glucose transporter OS=Kluyve...    36   0.10 
sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3     32   2.5  
sp|A6URH2|DP2L_METVS DNA polymerase II large subunit OS=Methanoc...    30   5.6  
sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogas...    30   7.4  
sp|Q74GT6|DAPA_GEOSL Dihydrodipicolinate synthase OS=Geobacter s...    30   9.7  

>sp|P49374|HGT1_KLULA High-affinity glucose transporter
           OS=Kluyveromyces lactis GN=HGT1 PE=3 SV=1
          Length = 551

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 25/86 (29%), Positives = 37/86 (43%)
 Frame = +1

Query: 244 GSQNGDDHIMPKDPDSSSKKANGIPPTSYLYCYIDGLTFRCASWLYFFALREAYYTINFL 423
           G  NGDD +  + P  ++  ANG+  +SYL+      T+    W+Y     E +  +   
Sbjct: 372 GGVNGDDTVTIQIPSENTSAANGVIASSYLFVCFFAPTWGIGIWIY---CSEIFNNMERA 428

Query: 424 IGFSGRVGTTTQTRGFASKMFSPKAW 501
            G S     T     FA  MF P A+
Sbjct: 429 KG-SALSAATNWAFNFALAMFVPSAF 453


>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
          Length = 6885

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -3

Query: 131  LRSWLRKRENKWE-MEYPLEKQELDWLILALAQARER 24
            LR WL  +E KW+ ME P EK EL     ALA+ RE+
Sbjct: 1955 LRKWLTNQEEKWKGMEEPGEKTEL--FCQALARKREQ 1989


>sp|A6URH2|DP2L_METVS DNA polymerase II large subunit
           OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM
           1224) GN=polC PE=3 SV=1
          Length = 1131

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 137 WILRSWLRKRENKWEMEYPLEKQE 66
           WILR    K  +KWE+ Y LE  E
Sbjct: 509 WILRGNFNKNSDKWEISYDLENPE 532


>sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster
           GN=CDase PE=1 SV=1
          Length = 704

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = -2

Query: 309 ICFFRTAIGILGHNMVVAIL*SARADSLERVIGTVWHDDL-----SHTHGTPPGWGLHLL 145
           + F     G++G+ +   ++       L+   G ++H+D      +HTHG P G+ +HLL
Sbjct: 75  VAFVSADAGMMGYGLKREVI-----KRLQARYGNIYHNDNVAISGTHTHGAPGGFLMHLL 129


>sp|Q74GT6|DAPA_GEOSL Dihydrodipicolinate synthase OS=Geobacter
           sulfurreducens GN=dapA PE=3 SV=1
          Length = 290

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 269 LCPRIPIAVLKKQMASLQQAISIVILMASRLDVLHG 376
           L P   I  +K+   SLQQA  I+ L   ++DVL G
Sbjct: 150 LAPHKNIVAIKEATGSLQQASEILALCGDQIDVLSG 185

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918208|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_G07.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3EB84|B3EB84_GEOLS Cytochrome bd-type quinol oxidase subunit...    35   2.5  
tr|Q1K0H2|Q1K0H2_DESAC Cytochrome bd-type quinol oxidase subunit...    33   9.3  

>tr|B3EB84|B3EB84_GEOLS Cytochrome bd-type quinol oxidase subunit
           1-like protein OS=Geobacter lovleyi (strain ATCC
           BAA-1151 / DSM 17278 / SZ) GN=Glov_1762 PE=4 SV=1
          Length = 585

 Score = 35.0 bits (79), Expect = 2.5
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 328 YLYCYIDGLTFRCASWLYFFALREAYYTINFLIGFSGRVGTTTQTRGFASKMFSPKAW 501
           Y +  +D  T +   W+YF A   + + IN +I F    G+   T  F S  F+P  W
Sbjct: 121 YAFGKMDDRTHQTIGWIYFGAAWMSLFLINGIIDFMLTPGSWISTSNFWSGFFNPTFW 178


>tr|Q1K0H2|Q1K0H2_DESAC Cytochrome bd-type quinol oxidase subunit
           1-like OS=Desulfuromonas acetoxidans DSM 684
           GN=Dace_2269 PE=4 SV=1
          Length = 655

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 328 YLYCYIDGLTFRCASWLYFFALREAYYTINFLIGFSGRVGTTTQTRGFASKMFSPKAW 501
           Y +  +D  T     W+YF A   + + IN +IGF    G       F S  F+P  W
Sbjct: 121 YKFDSMDERTHLKVGWIYFAAAWLSLFLINGIIGFMLTPGEWVNNHQFFSGFFNPTFW 178