BP918210 |
Clone id |
YMU001_000110_G09 |
Library |
YMU01 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_G09. |
Accession |
BP918210 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL868Contig1 |
Sequence |
CTAAGAAGGTTCCAAAGGAGAAGAAGGAAGTTGCACCCACCGGGAAAAGAGGTCAAGAAA GAGACAAAGCTCGGTATGACCATAAAGAAGAATGACAATTTTGGAGACTGGTATTCAGAG GTGGTTGTGAAGAGTGGAATGATCGAATACTACGATGTTTCAGGATGCTATATCTTGCGT CCATGGTCATATGCAGTATGGGAAATATTGAAGGATTTTGTTGATGCAGAAATAAAGAAA ATTGGGATTCAGAATTCTTATTTTCCTCTTTTTGTGTCTGAACAAGCCTTGACAAAAGAA AAGGATCATATTGAGGGCTTTGCTCCTGAGGTTGCATGGGTAACCAAATCTGGAAATACG GATTTAGAGGTTCCTATTGCTATCCGTCCAACCAATGAAACTGTGATGTATCCTGTCTTT GCAAAATGAATCAGAGGGCACAGAGATCTTCCTTTGCGACTAAATCAGTGGTGCAATGTG GTCCGATGGGAATTCAAGCATCCAACTCCATTTATCAGGAGCCGAGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CGC7 |
Definition |
sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus |
Align length |
162 |
Score (bit) |
259.0 |
E-value |
7.0e-69 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFZ3 |
Definition |
tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
161 |
Score (bit) |
290.0 |
E-value |
4.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918210|Adiantum capillus-veneris mRNA, clone: YMU001_000110_G09. (528 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella paten... 290 4e-77 tr|Q2QS12|Q2QS12_ORYSJ Bifunctional aminoacyl-tRNA synthetase, p... 275 1e-72 tr|Q2QS11|Q2QS11_ORYSJ cDNA clone:001-044-H01, full insert seque... 275 1e-72 tr|Q0INI9|Q0INI9_ORYSJ Os12g0443700 protein (Fragment) OS=Oryza ... 275 1e-72 tr|B8BPH6|B8BPH6_ORYSI Putative uncharacterized protein OS=Oryza... 275 1e-72 tr|B7SDH3|B7SDH3_ORYSJ Aminoacyl-tRNA synthase OS=Oryza sativa s... 275 1e-72 tr|A3CH13|A3CH13_ORYSJ Putative uncharacterized protein OS=Oryza... 275 1e-72 tr|A9PFZ9|A9PFZ9_POPTR Putative uncharacterized protein OS=Popul... 273 5e-72 tr|A7Q0Z4|A7Q0Z4_VITVI Chromosome chr7 scaffold_42, whole genome... 270 3e-71 tr|Q9M1R2|Q9M1R2_ARATH Multifunctional aminoacyl-tRNA ligase-lik... 267 2e-70 tr|Q6TXE9|Q6TXE9_RAT LRRGT00050 OS=Rattus norvegicus GN=Eprs PE=... 259 5e-68 tr|Q016X8|Q016X8_OSTTA Multifunctional aminoacyl-tRNA ligase-lik... 259 5e-68 tr|A4RYY0|A4RYY0_OSTLU Predicted protein OS=Ostreococcus lucimar... 258 1e-67 tr|Q5I0H2|Q5I0H2_RAT Eprs protein (Fragment) OS=Rattus norvegicu... 256 4e-67 tr|Q76KD2|Q76KD2_ORYLA Glutamyl-prolyl-tRNA synthetase (Fragment... 256 7e-67 tr|Q5ZJ86|Q5ZJ86_CHICK Putative uncharacterized protein OS=Gallu... 255 9e-67 tr|A8PJX1|A8PJX1_BRUMA Bifunctional aminoacyl-tRNA synthetase, p... 254 2e-66 tr|B1WBE0|B1WBE0_XENLA LOC100158438 protein OS=Xenopus laevis GN... 253 3e-66 tr|B1H1R9|B1H1R9_XENLA LOC100158287 protein OS=Xenopus laevis GN... 252 7e-66 tr|B0BMK2|B0BMK2_XENTR LOC100145057 protein (Fragment) OS=Xenopu... 252 7e-66 tr|B7PKR5|B7PKR5_IXOSC Glutamyl-tRNA synthetase, cytoplasmic, pu... 251 2e-65 tr|B3RQG2|B3RQG2_TRIAD Putative uncharacterized protein OS=Trich... 250 4e-65 tr|B6PUY6|B6PUY6_BRAFL Putative uncharacterized protein OS=Branc... 247 3e-64 tr|B6L487|B6L487_BRAFL Putative uncharacterized protein OS=Branc... 247 3e-64 tr|A8P3M4|A8P3M4_BRUMA Bifunctional aminoacyl-tRNA synthetase , ... 247 3e-64 tr|Q4S8E3|Q4S8E3_TETNG Chromosome undetermined SCAF14706, whole ... 245 9e-64 tr|Q65ZK5|Q65ZK5_CAEEL Prolyl trna synthetase protein 1, isoform... 244 2e-63 tr|Q22620|Q22620_CAEEL Prolyl trna synthetase protein 1, isoform... 244 2e-63 tr|Q4DLK5|Q4DLK5_TRYCR Prolyl-tRNA synthetase, putative OS=Trypa... 243 6e-63 tr|B8LCI1|B8LCI1_THAPS Prolyl-trna synthetase (Fragment) OS=Thal... 242 1e-62
>tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113773 PE=3 SV=1 Length = 544
Score = 290 bits (741), Expect = 4e-77 Identities = 129/161 (80%), Positives = 151/161 (93%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKE+ LG+ KK++NFG+WYS+VVV+ MIEYYDVSGCYILRPWSY++WE +KDF D Sbjct: 54 KEVKKESGLGLAFKKDENFGEWYSDVVVRGEMIEYYDVSGCYILRPWSYSIWESIKDFFD 113
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 EIKK+GI+N+YFPLFVSE+ALTKEKDH+EGFAPEVAWVT+SG+++LE PIAIRPT+ETV Sbjct: 114 KEIKKMGIENTYFPLFVSEKALTKEKDHVEGFAPEVAWVTRSGDSELEEPIAIRPTSETV 173
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP+FAK IRGHRDLPLR+NQWCNVVRWEFKHPTPFIRSRE Sbjct: 174 MYPIFAKWIRGHRDLPLRINQWCNVVRWEFKHPTPFIRSRE 214
>tr|Q2QS12|Q2QS12_ORYSJ Bifunctional aminoacyl-tRNA synthetase, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g25710 PE=3 SV=1 Length = 489
Score = 275 bits (702), Expect = 1e-72 Identities = 126/161 (78%), Positives = 141/161 (87%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ +WE+LK+F D Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPT+ETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IR HRDLPLR NQWCNVVRWEF +PTPFIRSRE Sbjct: 139 MYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSRE 179
>tr|Q2QS11|Q2QS11_ORYSJ cDNA clone:001-044-H01, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os12g25710 PE=2 SV=1 Length = 510
Score = 275 bits (702), Expect = 1e-72 Identities = 126/161 (78%), Positives = 141/161 (87%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ +WE+LK+F D Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPT+ETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IR HRDLPLR NQWCNVVRWEF +PTPFIRSRE Sbjct: 139 MYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSRE 179
>tr|Q0INI9|Q0INI9_ORYSJ Os12g0443700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os12g0443700 PE=3 SV=1 Length = 515
Score = 275 bits (702), Expect = 1e-72 Identities = 126/161 (78%), Positives = 141/161 (87%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ +WE+LK+F D Sbjct: 24 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 83
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPT+ETV Sbjct: 84 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 143
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IR HRDLPLR NQWCNVVRWEF +PTPFIRSRE Sbjct: 144 MYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSRE 184
>tr|B8BPH6|B8BPH6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38226 PE=4 SV=1 Length = 510
Score = 275 bits (702), Expect = 1e-72 Identities = 126/161 (78%), Positives = 141/161 (87%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ +WE+LK+F D Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPT+ETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IR HRDLPLR NQWCNVVRWEF +PTPFIRSRE Sbjct: 139 MYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSRE 179
>tr|B7SDH3|B7SDH3_ORYSJ Aminoacyl-tRNA synthase OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 510
Score = 275 bits (702), Expect = 1e-72 Identities = 126/161 (78%), Positives = 141/161 (87%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ +WE+LK+F D Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPT+ETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IR HRDLPLR NQWCNVVRWEF +PTPFIRSRE Sbjct: 139 MYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSRE 179
>tr|A3CH13|A3CH13_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034585 PE=3 SV=1 Length = 533
Score = 275 bits (702), Expect = 1e-72 Identities = 126/161 (78%), Positives = 141/161 (87%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ +WE+LK+F D Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPT+ETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IR HRDLPLR NQWCNVVRWEF +PTPFIRSRE Sbjct: 139 MYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSRE 179
>tr|A9PFZ9|A9PFZ9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 498
Score = 273 bits (697), Expect = 5e-72 Identities = 124/161 (77%), Positives = 142/161 (88%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKET LG++ KK +NFG+WYSEVVV MIEYYD+SGCYILRPW+ ++WEI++ F D Sbjct: 7 KEVKKETGLGLSFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEIMQVFFD 66
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ I+N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLE+PIAIRPT+ETV Sbjct: 67 AEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETV 126
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP F+K IRGHRDLPL+LNQWCNVVRWEF +PTPFIRSRE Sbjct: 127 MYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSRE 167
>tr|A7Q0Z4|A7Q0Z4_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028238001 PE=3 SV=1 Length = 516
Score = 270 bits (691), Expect = 3e-71 Identities = 125/161 (77%), Positives = 139/161 (86%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 KEVKKET LG++ KK +NFG+WYSEV V MIEYYD+SGCYILRPW+ AVWE ++ F D Sbjct: 26 KEVKKETGLGLSYKKEENFGEWYSEVCVNGEMIEYYDISGCYILRPWTMAVWETMQTFFD 85
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ I+N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLEVPIAIRPT+ETV Sbjct: 86 AEIKKMKIKNCYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGQSDLEVPIAIRPTSETV 145
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP ++K IRGHRDLPLRLNQWCNVVRWEF HPTPFIR RE Sbjct: 146 MYPYYSKWIRGHRDLPLRLNQWCNVVRWEFSHPTPFIRYRE 186
>tr|Q9M1R2|Q9M1R2_ARATH Multifunctional aminoacyl-tRNA ligase-like protein OS=Arabidopsis thaliana GN=T17J13.8 PE=2 SV=1 Length = 530
Score = 267 bits (683), Expect = 2e-70 Identities = 123/161 (76%), Positives = 143/161 (88%) Frame = +1
Query: 46 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAVWEILKDFVD 225 K+VKKET LG+++KK++NFG+WYSEV K MIEYYD+SGCYILRPWS A+WEI++ F D Sbjct: 40 KDVKKETGLGLSVKKDENFGEWYSEVC-KQDMIEYYDISGCYILRPWSMAIWEIMQIFFD 98
Query: 226 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTNETV 405 AEIKK+ ++N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLEVPIAIRPT+ETV Sbjct: 99 AEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETV 158
Query: 406 MYPVFAK*IRGHRDLPLRLNQWCNVVRWEFKHPTPFIRSRE 528 MYP ++K IRGHRDLPL+LNQWCNVVRWEF +PTPFIRSRE Sbjct: 159 MYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSRE 199
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