BP918213
Clone id YMU001_000110_G12
Library
Length 250
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAGAACCTTCAGGCATGATCACCCTCTGCTTCTTCTCGAGAGTCAACTGCTTTTGGAGTT
CTTGCATTTGCGCTTCATACATTTGACTCTCCCGAAATAATTTGAGTTGAGCTTGTAGCT
CTAACTCGCGCAGGCGATGCTCTCAGCCTCTGAATGGTTTGATCTTTGACTTTTAATTGG
TCCTTGAGCTCAATGACTTCATCTATGCTTGCTTCTTGTTCTATTTCCGCCTTCTCCTTA
GCATTCTTCA
■■Homology search results ■■ -
sp_hit_id Q9ZU70
Definition sp|Q9ZU70|ATB21_ARATH Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana
Align length 65
Score (bit) 33.5
E-value 0.34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918213|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_G12.
(250 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZU70|ATB21_ARATH Homeobox-leucine zipper protein ATHB-21 OS... 33 0.34
sp|Q80U62|K0226_MOUSE Uncharacterized protein KIAA0226 OS=Mus mu... 32 1.3
sp|P54257|HAP1_HUMAN Huntingtin-associated protein 1 OS=Homo sap... 30 2.8
sp|O97961|KTN1_VULVU Kinectin OS=Vulpes vulpes GN=KTN1 PE=2 SV=1 30 2.9
sp|Q92622|K0226_HUMAN Uncharacterized protein KIAA0226 OS=Homo s... 30 2.9
sp|O23208|ATB40_ARATH Homeobox-leucine zipper protein ATHB-40 OS... 30 2.9
sp|Q11072|YT44_CAEEL Uncharacterized RING finger protein B0416.4... 30 3.7
sp|A6PWD2|FHAD1_MOUSE Forkhead-associated domain-containing prot... 29 8.3

>sp|Q9ZU70|ATB21_ARATH Homeobox-leucine zipper protein ATHB-21
OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1
Length = 220

Score = 33.5 bits (75), Expect = 0.34
Identities = 26/65 (40%), Positives = 32/65 (49%)
Frame = -3

Query: 248 KNAKEKAEIEQEASIDEVIELKDQLKVKDQTIQRLRASPARVRATSSTQIISGESNV*SA 69
KNA E +E+ EVI LK+QL ++ IQRL RV T S IS + A
Sbjct: 126 KNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL---AKRVEGTLSNSPISSSVTI-EA 181

Query: 68 NARTP 54
N TP
Sbjct: 182 NHTTP 186


>sp|Q80U62|K0226_MOUSE Uncharacterized protein KIAA0226 OS=Mus
musculus GN=Kiaa0226 PE=2 SV=2
Length = 956

Score = 31.6 bits (70), Expect = 1.3
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -3

Query: 236 EKAEIEQEASIDEVIELKDQLKVKDQTIQRLRASPA-RVRATSSTQIISGESNV*SANAR 60
E+ E+E+E S E+ ELK +++++ Q I+ PA R S ++ S S S ++
Sbjct: 504 EEEEVEEEDSDREIQELKQKIRLRRQQIRTKNLLPAYRETENGSFRVTSSSSQFSSRDST 563

Query: 59 TPKAVDSREEAE 24
S E+A+
Sbjct: 564 QLSESGSAEDAD 575


>sp|P54257|HAP1_HUMAN Huntingtin-associated protein 1 OS=Homo
sapiens GN=HAP1 PE=1 SV=2
Length = 671

Score = 30.4 bits (67), Expect = 2.8
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -1

Query: 115 QAQ-LKLFRESQMYEAQMQELQKQLTLEKKQRVIMPEGS 2
QAQ LKL + +MY A+ ++LQKQL EK+ ++ + E S
Sbjct: 388 QAQVLKLQQRCRMYGAETEKLQKQLASEKEIQMQLQEES 426


>sp|O97961|KTN1_VULVU Kinectin OS=Vulpes vulpes GN=KTN1 PE=2 SV=1
Length = 1330

Score = 30.4 bits (67), Expect = 2.9
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Frame = -3

Query: 236 EKAEIEQEASIDEVIELKDQL-----KVKDQTIQRLRASPARVRATSSTQII-------S 93
EKAEIE+ + EV ELK QL K++ + +R + + +A S +I +
Sbjct: 1215 EKAEIERSTYVTEVRELKTQLNETLTKLRTEQSERQKVAGDLHKAQQSLDLIQSKIVKAA 1274

Query: 92 GESNV*SANARTPKAVDSREE 30
G++ V + +P+A S +E
Sbjct: 1275 GDTTVIENSDVSPEAESSEKE 1295


>sp|Q92622|K0226_HUMAN Uncharacterized protein KIAA0226 OS=Homo
sapiens GN=KIAA0226 PE=1 SV=3
Length = 972

Score = 30.4 bits (67), Expect = 2.9
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = -3

Query: 236 EKAEIEQEASIDEVIELKDQLKVKDQTIQRLRASP-------ARVRATSSTQIISGESNV 78
E+ E+E+E S E+ ELK +++++ Q I+ P R TSS+ S +
Sbjct: 519 EEEEVEEEDSDREIQELKQKIRLRRQQIRTKNLLPMYQEAEHGSFRVTSSSSQFSSRDSA 578

Query: 77 *SANARTPKAVDSREEAEGD 18
+++ + VD E + D
Sbjct: 579 QLSDSGSADEVDEFEIQDAD 598


>sp|O23208|ATB40_ARATH Homeobox-leucine zipper protein ATHB-40
OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2
Length = 217

Score = 30.4 bits (67), Expect = 2.9
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = -3

Query: 248 KNAKEKAEIEQEASIDEVIELKDQLKVKDQTIQRLRASPARVRATSSTQIISGESNV*SA 69
KN+ + +++ EVI+LK+QL ++ IQRL RV SS IS +V A
Sbjct: 121 KNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL---AERVEGGSSNSPISSSVSV-EA 176

Query: 68 NARTPKAVDSREEAEGD 18
N TP D + +GD
Sbjct: 177 N-ETPFFGDYKVGDDGD 192


>sp|Q11072|YT44_CAEEL Uncharacterized RING finger protein B0416.4
OS=Caenorhabditis elegans GN=B0416.4 PE=2 SV=1
Length = 218

Score = 30.0 bits (66), Expect = 3.7
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3

Query: 248 KNAKEKAEIEQEASIDEVIELKDQLKVKDQTIQRLRASPAR 126
K +E+ + E+E D++ +L+D++K+K+Q I + R
Sbjct: 25 KRLEEQIKAEEEQFSDKMKQLEDEIKIKEQVITMFKRKTVR 65


>sp|A6PWD2|FHAD1_MOUSE Forkhead-associated domain-containing protein 1
OS=Mus musculus GN=Fhad1 PE=2 SV=1
Length = 1420

Score = 28.9 bits (63), Expect = 8.3
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = -3

Query: 248 KNAKEKAEIEQEASIDEVIELKDQLKVKDQTIQRLRASPARVRATSSTQIISGESNV*SA 69
K +++ E ++ +E+ E K+Q+K QTI L +V T Q I GE
Sbjct: 877 KALQDERESQKHGFEEEISEYKEQIKQHSQTIVSLEERLCQV--TQYYQKIEGEITTLKN 934

Query: 68 NARTPKAVDSREEAEG 21
N PK S++ G
Sbjct: 935 NDTGPKEEASQDLTAG 950


tr_hit_id Q7XBE0
Definition tr|Q7XBE0|Q7XBE0_MAIZE Putative gypsy-type retrotransposon OS=Zea mays
Align length 61
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918213|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_G12.
(250 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XBE0|Q7XBE0_MAIZE Putative gypsy-type retrotransposon OS=Ze... 33 7.2

>tr|Q7XBE0|Q7XBE0_MAIZE Putative gypsy-type retrotransposon OS=Zea
mays GN=Z013I05_7 PE=4 SV=1
Length = 957

Score = 33.1 bits (74), Expect = 7.2
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -3

Query: 215 EASIDEVIELKDQLKVKDQTIQRLRASP---ARVRATSSTQIISGESNV*SANARTPKAV 45
+ S+DEV LK + KD TI+ LRAS A+ T+ + E + A+ KA+
Sbjct: 850 QESVDEVTRLKQLISAKDATIKELRASKKTIAQELETAQLAAKTAEETAATLKAQRDKAM 909

Query: 44 D 42
D
Sbjct: 910 D 910