BP918218 |
Clone id |
YMU001_000110_H06 |
Library |
YMU01 |
Length |
505 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_H06. |
Accession |
BP918218 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL468Contig1 |
Sequence |
ATAGAGCAATTACAAAGGACCTCTTCAGTTGTGCAAAAAACTTCCTGAAGTTCCAACTCT TAGCATACAGAGTACCCCACAAACCTATTCAATTGCCTCATGTCCTTCGGTGAGAACTTT TCACCTCATGAATCATAAGAAAATAACAGGGTTGAGGTAGGAATAGCCAGACATTCATAA ACCCACCTATGCGCTGACCCTGTTATCTAAAGCTGAAGTGCAGGATTCATATCAAAGAGG AAACTCATTTTCCTGCCTCTGCACACTTTTTGAAAGAAAGCAAAACTCCATTCTGGACAT ACCATCGGAATCTTACCAAGATGCCCCTATTCTATTGGCACCCAACGCCTATACATTGAC TCATCATGTGCATAGTGTCAAAACCTTATGTCATCTTGTTTCGAATCTGCCGGTGAACGT GGACAAGGTACTCCACATACGAAAGACCCAAAGCATTCTTGTCCTCCACAAGAAGTGACC AGAAAAGAAACTTCAACGGATCTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M291 |
Definition |
sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana |
Align length |
39 |
Score (bit) |
43.1 |
E-value |
0.0007 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S9N4 |
Definition |
tr|A9S9N4|A9S9N4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
39 |
Score (bit) |
62.0 |
E-value |
2.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918218|Adiantum capillus-veneris mRNA, clone: YMU001_000110_H06. (505 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S9N4|A9S9N4_PHYPA Predicted protein OS=Physcomitrella paten... 62 2e-08 tr|A7P0Y5|A7P0Y5_VITVI Chromosome chr19 scaffold_4, whole genome... 56 1e-06 tr|Q2QSF9|Q2QSF9_ORYSJ Retrotransposon protein, putative, unclas... 55 1e-06 tr|Q0INL9|Q0INL9_ORYSJ Os12g0430000 protein OS=Oryza sativa subs... 55 1e-06 tr|B8BPD2|B8BPD2_ORYSI Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|A3CGV8|A3CGV8_ORYSJ Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|A9S9P0|A9S9P0_PHYPA Predicted protein OS=Physcomitrella paten... 54 6e-06 tr|B8BKI0|B8BKI0_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|Q2R4A0|Q2R4A0_ORYSJ Protein transport protein Sec24-like CEF,... 51 4e-05 tr|Q0ISQ1|Q0ISQ1_ORYSJ Os11g0482100 protein (Fragment) OS=Oryza ... 51 4e-05 tr|B8BKH9|B8BKH9_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|A3CBA1|A3CBA1_ORYSJ Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|A4S4Y9|A4S4Y9_OSTLU Predicted protein OS=Ostreococcus lucimar... 45 0.002 tr|Q00YP1|Q00YP1_OSTTA S24C_ARATH Protein transport protein Sec2... 45 0.003 tr|Q27GK4|Q27GK4_ARATH Uncharacterized protein At3g44340.1 OS=Ar... 43 0.008 tr|Q641I5|Q641I5_XENLA MGC80413 protein OS=Xenopus laevis GN=sec... 40 0.049 tr|Q5B8Q0|Q5B8Q0_EMENI Putative uncharacterized protein OS=Emeri... 40 0.083 tr|Q2UQE8|Q2UQE8_ASPOR Vesicle coat complex COPII OS=Aspergillus... 39 0.11 tr|Q0CPA0|Q0CPA0_ASPTN Putative uncharacterized protein OS=Asper... 39 0.11 tr|B8MZM3|B8MZM3_ASPFL Sec23/Sec24 family protein OS=Aspergillus... 39 0.11 tr|B8M772|B8M772_9EURO Sec23/Sec24 family protein OS=Talaromyces... 39 0.11 tr|A8Q267|A8Q267_MALGO Putative uncharacterized protein OS=Malas... 39 0.14 tr|A7F0N1|A7F0N1_SCLS1 Putative uncharacterized protein OS=Scler... 39 0.19 tr|A6SPR1|A6SPR1_BOTFB SEC24 related gene family OS=Botryotinia ... 39 0.19 tr|Q4WXJ2|Q4WXJ2_ASPFU Sec23/Sec24 family protein OS=Aspergillus... 38 0.24 tr|B6GYD7|B6GYD7_PENCH Pc12g15830 protein OS=Penicillium chrysog... 38 0.24 tr|B0XY32|B0XY32_ASPFC Sec23/Sec24 family protein OS=Aspergillus... 38 0.24 tr|A1D799|A1D799_NEOFI Sec23/Sec24 family protein OS=Neosartorya... 38 0.24 tr|A1CK66|A1CK66_ASPCL Sec23/Sec24 family protein OS=Aspergillus... 38 0.24 tr|Q4PBY5|Q4PBY5_USTMA Putative uncharacterized protein OS=Ustil... 38 0.32
>tr|A9S9N4|A9S9N4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_76562 PE=4 SV=1 Length = 1007
Score = 62.0 bits (149), Expect = 2e-08 Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GDP + LF++ LVEDK+ALGLSYVEYLV HRQI+N+MT Sbjct: 969 GDPRELLFYNYLVEDKSALGLSYVEYLVQTHRQIQNRMT 1007
>tr|A7P0Y5|A7P0Y5_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027411001 PE=4 SV=1 Length = 77
Score = 55.8 bits (133), Expect = 1e-06 Identities = 25/39 (64%), Positives = 32/39 (82%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GD LF+S +VEDK A+GLSYVE+LVH+HRQI+ KM+ Sbjct: 39 GDASGMLFFSFMVEDKTAIGLSYVEFLVHIHRQIQIKMS 77
>tr|Q2QSF9|Q2QSF9_ORYSJ Retrotransposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g24250 PE=4 SV=1 Length = 1083
Score = 55.5 bits (132), Expect = 1e-06 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GDP F SLLVEDK GLSYVE+LVHVHRQI++KMT Sbjct: 1045 GDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 1083
>tr|Q0INL9|Q0INL9_ORYSJ Os12g0430000 protein OS=Oryza sativa subsp. japonica GN=Os12g0430000 PE=4 SV=1 Length = 867
Score = 55.5 bits (132), Expect = 1e-06 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GDP F SLLVEDK GLSYVE+LVHVHRQI++KMT Sbjct: 829 GDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 867
>tr|B8BPD2|B8BPD2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38153 PE=4 SV=1 Length = 1094
Score = 55.5 bits (132), Expect = 1e-06 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GDP F SLLVEDK GLSYVE+LVHVHRQI++KMT Sbjct: 1056 GDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 1094
>tr|A3CGV8|A3CGV8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034530 PE=4 SV=1 Length = 1056
Score = 55.5 bits (132), Expect = 1e-06 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GDP F SLLVEDK GLSYVE+LVHVHRQI++KMT Sbjct: 1018 GDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 1056
>tr|A9S9P0|A9S9P0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126303 PE=4 SV=1 Length = 1044
Score = 53.5 bits (127), Expect = 6e-06 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 3/42 (7%) Frame = -1
Query: 505 GDPLK---FLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 GDP LF + LVEDK ALGLSYVEYLV HRQI+N+MT Sbjct: 1003 GDPRGTTFLLFQNYLVEDKTALGLSYVEYLVQTHRQIQNRMT 1044
>tr|B8BKI0|B8BKI0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36108 PE=4 SV=1 Length = 784
Score = 52.0 bits (123), Expect = 2e-05 Identities = 25/39 (64%), Positives = 30/39 (76%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 G+P F S L+EDK GLSYVE+LVHVHRQI++KMT Sbjct: 746 GEPSGDFFRSFLIEDKAPGGLSYVEFLVHVHRQIQSKMT 784
>tr|Q2R4A0|Q2R4A0_ORYSJ Protein transport protein Sec24-like CEF, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g29200 PE=4 SV=1 Length = 810
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/39 (64%), Positives = 29/39 (74%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 G+P F S L EDK GLSYVE+LVHVHRQI++KMT Sbjct: 772 GEPSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKMT 810
>tr|Q0ISQ1|Q0ISQ1_ORYSJ Os11g0482100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0482100 PE=4 SV=1 Length = 577
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/39 (64%), Positives = 29/39 (74%) Frame = -1
Query: 505 GDPLKFLFWSLLVEDKNALGLSYVEYLVHVHRQIRNKMT 389 G+P F S L EDK GLSYVE+LVHVHRQI++KMT Sbjct: 539 GEPSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKMT 577
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