BP918220 |
Clone id |
YMU001_000110_H09 |
Library |
YMU01 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_H09. |
Accession |
BP918220 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1576Contig1 |
Sequence |
GCCACAAATGGTGAGAGGAGCTCACCCATACCCTGGCAATATCCAGTCTCTGGATCAAAA AGAGCATACACCTCCAGTATAGAAACTAACCTCGCAGCATGATGCTGCAAACAAGGTTCT AGATCTAAATCCTCCTTAAGGCCAACATCCAACGCGAGCTGAGTTGCAGCTCCCTTTGTT ACACTGGCCTGAGAGGGTGAGTGTGCAACCCATTCGGCATTCATGCGAATGGCATCCAAT CTCATGATCCGCTGCCACATCGTAAACTCTTTCTTAGCCTGCACACTCATTTCTTCCCAT TTTGCAAGCTTGTCTTGCTCCATTGGGCTGTTCAAATTTTTGTCTGCACATTCTCTATGC TCTAGCAACAATGAACCATCTGTAGGGATCAGTGCAGGCAGAGACACATCAAAAACGTGC TGACTGTCTGGATTGACATTCTCAAAAGCATCTTTATTCTCAAACAATCCCCTCGATTCC AATGTAACCTTCTCCCTTACTATTTTGCAGCATCGCACAAGGTCATCATACTCTTCCCTC CTGACAAGCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q755I4 |
Definition |
sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya gossypii |
Align length |
29 |
Score (bit) |
36.2 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LR92 |
Definition |
tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
153 |
Score (bit) |
133.0 |
E-value |
7.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918220|Adiantum capillus-veneris mRNA, clone: YMU001_000110_H09. (552 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea... 133 7e-30 tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea... 133 7e-30 tr|A9TX53|A9TX53_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 3e-25 tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genom... 116 7e-25 tr|A9RYK1|A9RYK1_PHYPA Predicted protein (Fragment) OS=Physcomit... 115 2e-24 tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis... 114 3e-24 tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genom... 114 4e-24 tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like smal... 113 8e-24 tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like smal... 113 8e-24 tr|B4FIM1|B4FIM1_MAIZE Putative uncharacterized protein OS=Zea m... 110 4e-23 tr|Q9FJC7|Q9FJC7_ARATH GTPase activator protein of Rab-like smal... 110 5e-23 tr|Q94BY9|Q94BY9_ARATH AT5g53570/MNC6_11 OS=Arabidopsis thaliana... 110 5e-23 tr|Q56WX5|Q56WX5_ARATH GTPase activator protein of Rab-like smal... 110 5e-23 tr|Q94HX6|Q94HX6_ORYSA Putative GTPase activating protein OS=Ory... 108 2e-22 tr|Q7XCR7|Q7XCR7_ORYSJ Os10g0518100 protein OS=Oryza sativa subs... 108 2e-22 tr|B8BHW1|B8BHW1_ORYSI Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|A3C6I1|A3C6I1_ORYSJ Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q6Z9D7|Q6Z9D7_ORYSJ Os08g0547200 protein OS=Oryza sativa subs... 107 4e-22 tr|Q69NG6|Q69NG6_ORYSJ Os09g0528800 protein OS=Oryza sativa subs... 107 4e-22 tr|B8B9D2|B8B9D2_ORYSI Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|A3BVG7|A3BVG7_ORYSJ Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|Q9FIN3|Q9FIN3_ARATH GTPase activator-like protein of Rab-like... 104 4e-21 tr|Q67XX9|Q67XX9_ARATH GTPase activator like protein of Rab-like... 104 4e-21 tr|Q0WLJ6|Q0WLJ6_ARATH GTPase activator-like protein of Rab-like... 104 4e-21 tr|Q9SG14|Q9SG14_ARATH Putative GTPase activator protein of Rab-... 103 5e-21 tr|Q4V3B4|Q4V3B4_ARATH At3g49350 (GTPase activating-like protein... 103 5e-21 tr|A3C0V1|A3C0V1_ORYSJ Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|A2Z3C3|A2Z3C3_ORYSI Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|B4FE62|B4FE62_MAIZE Putative uncharacterized protein OS=Zea m... 58 4e-07 tr|A9TWF8|A9TWF8_PHYPA Predicted protein (Fragment) OS=Physcomit... 50 8e-05
>tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 455
Score = 133 bits (334), Expect = 7e-30 Identities = 67/153 (43%), Positives = 102/153 (66%) Frame = -2
Query: 461 ENKDAFENVNPDSQHVFDVSLPALIPTDGSLLLEHRECADKNLNSPMEQDKLAKWEEMSV 282 E++ + + D ++F V + DG + + + K+ ++ ++ D++ +E Sbjct: 130 ESEACLDGESTDEYNLFPVKSSVTV-NDGQTVNDGQTQDRKSSDNEVKFDRIESLKERGP 188
Query: 281 QAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQH 102 +A ++F+ WQRI+RLDA+RMNAEW+ +SPSQA+V++ A+ L VGLK D LEP +H Sbjct: 189 KALEDFSTWQRIIRLDAVRMNAEWIPYSPSQANVSEEEASVLGCHVGLKNDEHLEPSRKH 248
Query: 101 HAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 HAARLV+ILE YAL+D + GYCQGM +LLSPFV Sbjct: 249 HAARLVAILETYALYDYDIGYCQGMSDLLSPFV 281
>tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 585
Score = 133 bits (334), Expect = 7e-30 Identities = 67/153 (43%), Positives = 102/153 (66%) Frame = -2
Query: 461 ENKDAFENVNPDSQHVFDVSLPALIPTDGSLLLEHRECADKNLNSPMEQDKLAKWEEMSV 282 E++ + + D ++F V + DG + + + K+ ++ ++ D++ +E Sbjct: 260 ESEACLDGESTDEYNLFPVKSSVTV-NDGQTVNDGQTQDRKSSDNEVKFDRIESLKERGP 318
Query: 281 QAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQH 102 +A ++F+ WQRI+RLDA+RMNAEW+ +SPSQA+V++ A+ L VGLK D LEP +H Sbjct: 319 KALEDFSTWQRIIRLDAVRMNAEWIPYSPSQANVSEEEASVLGCHVGLKNDEHLEPSRKH 378
Query: 101 HAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 HAARLV+ILE YAL+D + GYCQGM +LLSPFV Sbjct: 379 HAARLVAILETYALYDYDIGYCQGMSDLLSPFV 411
>tr|A9TX53|A9TX53_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_31780 PE=4 SV=1 Length = 367
Score = 117 bits (294), Expect = 3e-25 Identities = 52/91 (57%), Positives = 72/91 (79%) Frame = -2
Query: 275 KKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHA 96 ++ F W+RI++LDA+RMNAEW+ ++ +QASVT A +L+ + GL +D LEP ++HHA Sbjct: 111 EENFQTWRRIIKLDAVRMNAEWIPYAATQASVTSQEAERLSKEAGLMDDEHLEPPMRHHA 170
Query: 95 ARLVSILEVYALFDPETGYCQGMGELLSPFV 3 AR+V ILE Y ++DPETGYCQGM +LLSPFV Sbjct: 171 ARVVLILEAYTMYDPETGYCQGMSDLLSPFV 201
>tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000523001 PE=4 SV=1 Length = 553
Score = 116 bits (291), Expect = 7e-25 Identities = 59/113 (52%), Positives = 79/113 (69%) Frame = -2
Query: 341 KNLNSPMEQDKLAKWEEMSVQAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAAT 162 K +SP E + +K ++ ++F WQRI+RLDA+R NAEW+ +SPSQA+V++ A Sbjct: 272 KENSSPSETESGSK-----LRMNEDFATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKAR 326
Query: 161 QLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 + A VGLK+ LEPC HAARLV+ILE YAL+D E GYCQGM +LLSP + Sbjct: 327 RFAESVGLKDYDHLEPCRIFHAARLVAILEAYALYDSEIGYCQGMSDLLSPII 379
>tr|A9RYK1|A9RYK1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121602 PE=4 SV=1 Length = 274
Score = 115 bits (288), Expect = 2e-24 Identities = 53/91 (58%), Positives = 71/91 (78%) Frame = -2
Query: 275 KKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHA 96 +++F WQRI+RLDA+RMNAEW+ ++ +QA VT A +L+ GL++D LEP +HHA Sbjct: 6 EEDFQTWQRIIRLDAVRMNAEWIPYAETQAHVTFEEAARLSKVAGLQDDEHLEPPRRHHA 65
Query: 95 ARLVSILEVYALFDPETGYCQGMGELLSPFV 3 ARLV ILE Y ++DP+TGYCQGM +LLSPFV Sbjct: 66 ARLVLILEAYTIYDPKTGYCQGMSDLLSPFV 96
>tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025995 PE=4 SV=1 Length = 266
Score = 114 bits (285), Expect = 3e-24 Identities = 54/90 (60%), Positives = 69/90 (76%) Frame = -2
Query: 272 KEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHAA 93 ++F WQRI+RLDA+R NAEW+ +SPSQA+V++ A + A VGLK+ LEPC HAA Sbjct: 3 EDFATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKARRFAESVGLKDYDHLEPCRIFHAA 62
Query: 92 RLVSILEVYALFDPETGYCQGMGELLSPFV 3 RLV+ILE YAL+D E GYCQGM +LLSP + Sbjct: 63 RLVAILEAYALYDSEIGYCQGMSDLLSPII 92
>tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037201001 PE=4 SV=1 Length = 513
Score = 114 bits (284), Expect = 4e-24 Identities = 79/209 (37%), Positives = 113/209 (54%), Gaps = 26/209 (12%) Frame = -2
Query: 551 KLVRREEYDDLVRCCKIVR----EKVTL-ESRGLFENKD----AFENVNPDSQHVFDVSL 399 K R+EY+ L R C+ + E L ES G N + + +PDS+ V Sbjct: 128 KTQNRKEYEKLRRECRRLLKHSGESYKLKESGGTCGNGENGSFIHDTDSPDSEDVVSAR- 186
Query: 398 PALIPTDGSLLLE----------------HRECADKNLNSPMEQDKLAKWEEMS-VQAKK 270 +L S LLE + E +D + + + +K E S ++ + Sbjct: 187 ESLSNHPSSTLLEGEDVSRRITCASSSVLNSESSDSDSSEDPDDSSPSKTEVHSKIRTAE 246
Query: 269 EFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHAAR 90 +F WQRI+R+DA+R N+EW+ +SP+QA+V++G A A VGLK+ LEP HAAR Sbjct: 247 DFATWQRIIRVDAVRANSEWIPYSPAQAAVSEGRARCSAEAVGLKDYDHLEPSRIFHAAR 306
Query: 89 LVSILEVYALFDPETGYCQGMGELLSPFV 3 LV+ILE YAL+DPE GYCQGM +LLSP + Sbjct: 307 LVAILEAYALYDPEIGYCQGMSDLLSPII 335
>tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 506
Score = 113 bits (282), Expect = 8e-24 Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Frame = -2
Query: 344 DKNLNSPMEQDKLAKWEEMSVQAKKEF-TMWQRIMRLDAIRMNAEWVAHSPSQASVTKGA 168 +K ++SP + K S A ++F + WQRI+RLDA+R N EWV +SP+QA+V++ Sbjct: 225 EKEISSPSSKPK-------SQAADEDFMSTWQRIIRLDAVRANDEWVPYSPTQAAVSETK 277
Query: 167 ATQLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 A +A+ VGL + LEPC HAARLV ILE YA++DPE GYCQGM +LLSP + Sbjct: 278 ARGIAIQVGLNDYDHLEPCRIFHAARLVGILEAYAVYDPEIGYCQGMSDLLSPLI 332
>tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana GN=At5g41940 PE=2 SV=1 Length = 549
Score = 113 bits (282), Expect = 8e-24 Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Frame = -2
Query: 344 DKNLNSPMEQDKLAKWEEMSVQAKKEF-TMWQRIMRLDAIRMNAEWVAHSPSQASVTKGA 168 +K ++SP + K S A ++F + WQRI+RLDA+R N EWV +SP+QA+V++ Sbjct: 268 EKEISSPSSKPK-------SQAADEDFMSTWQRIIRLDAVRANDEWVPYSPTQAAVSETK 320
Query: 167 ATQLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 A +A+ VGL + LEPC HAARLV ILE YA++DPE GYCQGM +LLSP + Sbjct: 321 ARGIAIQVGLNDYDHLEPCRIFHAARLVGILEAYAVYDPEIGYCQGMSDLLSPLI 375
>tr|B4FIM1|B4FIM1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 547
Score = 110 bits (276), Expect = 4e-23 Identities = 53/95 (55%), Positives = 68/95 (71%) Frame = -2
Query: 287 SVQAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCL 108 S + ++F WQRI+RLDAIR N+EW+ S +QA V K A Q A VGLK+ LEP + Sbjct: 279 SSRTPEDFATWQRIIRLDAIRSNSEWIMFSGNQAEVPKERALQSAASVGLKDYDHLEPSM 338
Query: 107 QHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 +HAARLV +LE YA++DPE GYCQGM +LLSP + Sbjct: 339 IYHAARLVGLLEAYAVYDPEIGYCQGMSDLLSPII 373
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