BP918221
Clone id YMU001_000110_H10
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000110_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATCATCAGCAGCAACAACAGAAAAAGAAAGAGAAGAAGCAAGAGAAAGGGAAGTGCTCA
AAACTACACAGCTTAGAGATGGCTGCAAAGGAGCAGAGTGCCGGGCTTGGACCACGCTAC
TTGCAAATGGGCATGCGTCCTGGTGTTTTCTGATATCAGCAAATGAGCATATGCCAATAC
ATCGAAGGTCTACATGGCTGTTGATGCTTCATTTGCTACATATCTTGACATGTTGCATGG
TCTTCTGTGCAACGTGATTTCTGCCCAATGCTCTGAGTGTCAAGGAAAACTTTTAGAGCA
AGTTATGGCTTCTCTAACGTAGCCTAGTGCACGGACAAACGACGCCGTGTATACATGTTT
GGAAGGTGGTGATCATCACGGCCATGTCTAAGCAACACCTGAGCTTTATCTAAACCCTCA
CAGAGAAAGGGCTCACCAGCATATCCTGCCTCATGTATTGAACATGGCTTACCATGTAAT
GCCGTTTGACTAGTTTGTACCTTTTTAAGCTTGTAGTGCAACAAACAGGTGCATATCACA
■■Homology search results ■■ -
sp_hit_id O46683
Definition sp|O46683|MCPT3_SHEEP Mast cell protease 3 OS=Ovis aries
Align length 34
Score (bit) 34.3
E-value 0.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918221|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_H10.
(540 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O46683|MCPT3_SHEEP Mast cell protease 3 OS=Ovis aries PE=2 SV=1 34 0.40
sp|P80931|MCT1A_SHEEP Mast cell protease 1A OS=Ovis aries PE=1 SV=2 32 2.0
sp|P80219|DDN1_BOVIN Duodenase-1 OS=Bos taurus GN=BDMD1 PE=1 SV=2 31 3.4
sp|O96028|NSD2_HUMAN Probable histone-lysine N-methyltransferase... 30 5.8
sp|Q09500|CTNS_CAEEL Cystinosin homolog OS=Caenorhabditis elegan... 30 9.9

>sp|O46683|MCPT3_SHEEP Mast cell protease 3 OS=Ovis aries PE=2 SV=1
Length = 251

Score = 34.3 bits (77), Expect = 0.40
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -2

Query: 446 GYAGEPFLCEGLDKAQVLLRHGRDDHHLPNMYTR 345
G +G P +C+G+ AQ ++ +G+DD PN+YTR
Sbjct: 199 GDSGGPLVCDGV--AQGIVSYGKDDGTTPNVYTR 230


>sp|P80931|MCT1A_SHEEP Mast cell protease 1A OS=Ovis aries PE=1 SV=2
Length = 245

Score = 32.0 bits (71), Expect = 2.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -2

Query: 449 AGYAGEPFLCEGLDKAQVLLRHGRDDHHLPNMYTR 345
+G +G P +C G+ AQ ++ +G+DD P++YTR
Sbjct: 198 SGDSGGPLVCNGV--AQGIVSYGKDDGTTPDVYTR 230


>sp|P80219|DDN1_BOVIN Duodenase-1 OS=Bos taurus GN=BDMD1 PE=1 SV=2
Length = 251

Score = 31.2 bits (69), Expect = 3.4
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -2

Query: 449 AGYAGEPFLCEGLDKAQVLLRHGRDDHHLPNMYTR 345
+G +G P +C G+ AQ ++ +GR+D P++YTR
Sbjct: 198 SGDSGGPLVCNGV--AQGIVSYGRNDGTTPDVYTR 230


>sp|O96028|NSD2_HUMAN Probable histone-lysine N-methyltransferase
NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1
Length = 1365

Score = 30.4 bits (67), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -1

Query: 180 VLAYAHLLISENTRTHAHLQVAW----SKPGTLLLC 85
++ AH + R HAH+ V+W SK G+LL C
Sbjct: 811 IICTAHFTARKGKRHHAHVNVSWCFVCSKGGSLLCC 846


>sp|Q09500|CTNS_CAEEL Cystinosin homolog OS=Caenorhabditis elegans
GN=ctns-1 PE=2 SV=2
Length = 404

Score = 29.6 bits (65), Expect = 9.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1

Query: 360 KHVYTASFVRALGYVREAITCSKSFP 283
+ + SFV +L Y++ A+TC K FP
Sbjct: 260 RKIQLLSFVTSLSYIKMAVTCCKYFP 285


tr_hit_id B6DXC8
Definition tr|B6DXC8|B6DXC8_BOVIN Granzyme B OS=Bos taurus
Align length 34
Score (bit) 33.9
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918221|Adiantum capillus-veneris mRNA, clone:
YMU001_000110_H10.
(540 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6DXC8|B6DXC8_BOVIN Granzyme B OS=Bos taurus PE=2 SV=1 34 5.6

>tr|B6DXC8|B6DXC8_BOVIN Granzyme B OS=Bos taurus PE=2 SV=1
Length = 251

Score = 33.9 bits (76), Expect = 5.6
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2

Query: 446 GYAGEPFLCEGLDKAQVLLRHGRDDHHLPNMYTR 345
G +G P +C G+ AQ ++ +GRDD PN+YTR
Sbjct: 199 GDSGGPLVCNGV--AQGIVSYGRDDGTPPNVYTR 230