BP918222 |
Clone id |
YMU001_000110_H11 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000110_H11. |
Accession |
BP918222 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTCCCATTCACTGTATACTGGAGAGGTTCGGTCGGATTTTGAATTTTGACTATCCTTTCT TTTGATTGAAACTGGTAACAAATACTTGGCAGGTTCCCCCCTACTATCTCCACCACAGAG ACCACACTTTCTCCCTTCGAGTTCATTCAATCTTACCTCACCTTCATAAGCAGCATCTTT CTTCTCATTGCCCTGATCAGAAGTTCCAAGTGTCTCCACAATTTCCTCCTCCTTTGAGAT TGGTAAGGTCTCCTCCTGCCTACTCTCAGGTAAGGAAGTCTTTGGAAGCTCATCCCCAGA AAGAGGCTTGCCAGTATCAAAATGATCAAGAATTGAGCATGATAAATTGTGGTCATTGCT TGATGCCTGCACTCCATTCGGTAGTTTGTTGAATGGCTTATTGCAAAAGTTAACCTCTGA AGTCTCCAAATAAATGAGGCTGCAGACACCAGAAGCATTTGCTGGAGGCTGAGATTGAGG AGCATCTTCTTGAACTCCTCCAAATGAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9NY61 |
Definition |
sp|Q9NY61|AATF_HUMAN Protein AATF OS=Homo sapiens |
Align length |
66 |
Score (bit) |
35.0 |
E-value |
0.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P1T3 |
Definition |
tr|A7P1T3|A7P1T3_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
79 |
Score (bit) |
39.3 |
E-value |
0.11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918222|Adiantum capillus-veneris mRNA, clone: YMU001_000110_H11. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P1T3|A7P1T3_VITVI Chromosome chr19 scaffold_4, whole genome... 39 0.11 tr|B4ML64|B4ML64_DROWI GK19282 OS=Drosophila willistoni GN=GK192... 39 0.15 tr|B8A0K4|B8A0K4_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.42 tr|A2RAE2|A2RAE2_ASPNC Similarity to hypothetical protein YML079... 37 0.55 tr|B8A778|B8A778_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.72 tr|A9SRS8|A9SRS8_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.72 tr|A2ZWD4|A2ZWD4_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.72 tr|Q21354|Q21354_CAEEL Protein K08F4.5, confirmed by transcript ... 37 0.72 tr|Q0CUA7|Q0CUA7_ASPTN Predicted protein OS=Aspergillus terreus ... 36 0.94 tr|Q8UW88|Q8UW88_ORYLA Vitellogenin 1 OS=Oryzias latipes GN=Ol-v... 36 1.2 tr|Q23136|Q23136_CAEEL Putative uncharacterized protein OS=Caeno... 36 1.2 tr|A5K156|A5K156_PLAVI Putative uncharacterized protein OS=Plasm... 36 1.2 tr|Q7SDB5|Q7SDB5_NEUCR Predicted protein OS=Neurospora crassa GN... 36 1.2 tr|Q48LH6|Q48LH6_PSE14 Putative uncharacterized protein OS=Pseud... 35 1.6 tr|Q4ZPY0|Q4ZPY0_PSEU2 Putative uncharacterized protein OS=Pseud... 35 2.1 tr|Q2H4K4|Q2H4K4_CHAGB Putative uncharacterized protein OS=Chaet... 35 2.1 tr|Q4N132|Q4N132_THEPA Putative uncharacterized protein OS=Theil... 35 2.7 tr|B4GUD4|B4GUD4_DROPE GL24790 OS=Drosophila persimilis GN=GL247... 35 2.7 tr|B8NDN7|B8NDN7_ASPFL Putative uncharacterized protein OS=Asper... 35 2.7 tr|Q4T2S0|Q4T2S0_TETNG Chromosome undetermined SCAF10201, whole ... 34 3.6 tr|Q3B8P7|Q3B8P7_RAT Similar to Protein C6orf203 OS=Rattus norve... 34 3.6 tr|Q7NLI6|Q7NLI6_GLOVI Gll1137 protein OS=Gloeobacter violaceus ... 34 3.6 tr|A9SDN8|A9SDN8_PHYPA Predicted protein OS=Physcomitrella paten... 34 3.6 tr|B6KLZ0|B6KLZ0_TOXGO Putative uncharacterized protein OS=Toxop... 34 3.6 tr|B7S2C5|B7S2C5_9GAMM Putative Mg chelatase OS=marine gamma pro... 34 4.7 tr|B5YNT0|B5YNT0_THAPS Predicted protein OS=Thalassiosira pseudo... 34 4.7 tr|Q17H40|Q17H40_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.7 tr|A7SRG3|A7SRG3_NEMVE Predicted protein OS=Nematostella vectens... 34 4.7 tr|B4D9H1|B4D9H1_9BACT Putative uncharacterized protein OS=Chtho... 33 6.1 tr|A9TLC0|A9TLC0_PHYPA Predicted protein OS=Physcomitrella paten... 33 6.1
>tr|A7P1T3|A7P1T3_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027744001 PE=3 SV=1 Length = 1180
Score = 39.3 bits (90), Expect = 0.11 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = -3
Query: 231 EEEIVETLGTSDQGNEKKDAAYE-GEVRLNELEGRKCGLCGGDSRGEPAKYLL-PVSIKR 58 +E+ VE + K AY G+ R+ E GR+CGLCGG + G+P K ++ + Sbjct: 43 DEKPVEPENSMGVDKSNKALAYTLGKPRIKE--GRRCGLCGGGTDGKPPKRVVQDIGESE 100
Query: 57 KDSQNSKSDRTSPVYSEWE 1 ++ + S P Y W+ Sbjct: 101 NEACSGSSASDEPNYDPWD 119
>tr|B4ML64|B4ML64_DROWI GK19282 OS=Drosophila willistoni GN=GK19282 PE=4 SV=1 Length = 511
Score = 38.9 bits (89), Expect = 0.15 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 5/116 (4%) Frame = +3
Query: 96 PPYYLHHRDHTFSLRVHSILPHLH--KQHLSSHCPDQKFQVSPQFPPPLRLVRSPP---A 260 PP++LHH H + H+ HLH +Q H F + Q P ++ PP Sbjct: 31 PPHHLHHHHHHQQQQHHAQHHHLHQQQQQQQQHHHQGMFTPAGQQLIPSSVLHYPPRNQP 90
Query: 261 YSQVRKSLEAHPQKEACQYQNDQELSMINCGHCLMPALHSVVC*MAYCKS*PLKSP 428 Q ++ L+ H Q Q Q Q+ + H PA S+ C + P SP Sbjct: 91 QPQSQQQLQLHHQSSYQQQQQQQQQQLPTSNHYETPAT-SLFCASSAPSPSPSPSP 145
>tr|B8A0K4|B8A0K4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 444
Score = 37.4 bits (85), Expect = 0.42 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 9/86 (10%) Frame = -3
Query: 372 VQASSNDHNLSC--------SILDHFDTGKPLSGDELPKT-SLPESRQEETLPISKEEEI 220 + SND ++C ++ DH T + D L + SLP S QE PI + EE Sbjct: 145 IHGQSNDTEVACDSSVTTCEAVPDHATTELDVKSDSLDNSQSLPSSIQE-CEPIYQGEEH 203
Query: 219 VETLGTSDQGNEKKDAAYEGEVRLNE 142 + LGT++ E ++ YEGEV L E Sbjct: 204 I--LGTTNMVYENQEPVYEGEVVLAE 227
>tr|A2RAE2|A2RAE2_ASPNC Similarity to hypothetical protein YML079w - Saccharomyces cerevisiae OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An18g02840 PE=4 SV=1 Length = 202
Score = 37.0 bits (84), Expect = 0.55 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = +3
Query: 216 PQFPPPLRLVRSPPAYSQVRKSLEAHPQKEACQYQ----NDQELSMIN 347 P FPPP + + PP+ Q +SL+ HP E YQ + QE+ + N Sbjct: 6 PPFPPPSQPTKEPPSVIQTIQSLDLHPHPEGGYYQETFRHPQEIPIAN 53
>tr|B8A778|B8A778_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03204 PE=4 SV=1 Length = 1895
Score = 36.6 bits (83), Expect = 0.72 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Frame = -3
Query: 195 QGNEKKDAAYEGEVRLNELEGRKCGLCGGDSRGEPAKYLLPVSIKRKDSQNSKSD----R 28 +G K + E + + EGR+CGLCGG + G P K L ++ DS N + Sbjct: 384 EGVRKFPVSEEKQGTMEIKEGRRCGLCGGGTDGRPPKVALHDTV---DSDNEAYEGALPS 440
Query: 27 TSPVYSEWE 1 P Y W+ Sbjct: 441 EDPNYDMWD 449
>tr|A9SRS8|A9SRS8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_230639 PE=4 SV=1 Length = 921
Score = 36.6 bits (83), Expect = 0.72 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%) Frame = -3
Query: 483 APQSQPPANASGVCSLIYLETSEVNFCNKPFNKLPNGVQASSNDHNLSCSILDHFDTGKP 304 +PQS P S S+I +E C P +L S + +SC+ L+ DTG Sbjct: 473 SPQSATPPGTSPSSSIIAVEE-----CESPSRRLSAEFNVQSQNSEVSCTSLEGDDTGND 527
Query: 303 LSG--DELPKTSLPESRQEETLPISKEEEIVETLGTSDQGNEKK 178 E+P TS P R SK E+ ETL S + ++++ Sbjct: 528 DHSFQAEVPLTSDPNER-------SKNEDGNETLSESAEVDKRE 564
>tr|A2ZWD4|A2ZWD4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002856 PE=3 SV=1 Length = 1977
Score = 36.6 bits (83), Expect = 0.72 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Frame = -3
Query: 195 QGNEKKDAAYEGEVRLNELEGRKCGLCGGDSRGEPAKYLLPVSIKRKDSQNSKSD----R 28 +G K + E + + EGR+CGLCGG + G P K L ++ DS N + Sbjct: 246 EGVRKFPVSEEKQGTMEIKEGRRCGLCGGGTDGRPPKVALHDTV---DSDNEAYEGALPS 302
Query: 27 TSPVYSEWE 1 P Y W+ Sbjct: 303 EDPNYDMWD 311
Score = 36.6 bits (83), Expect = 0.72 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Frame = -3
Query: 195 QGNEKKDAAYEGEVRLNELEGRKCGLCGGDSRGEPAKYLLPVSIKRKDSQNSKSD----R 28 +G K + E + + EGR+CGLCGG + G P K L ++ DS N + Sbjct: 571 EGVRKFPVSEEKQGTMEIKEGRRCGLCGGGTDGRPPKVALHDTV---DSDNEAYEGALPS 627
Query: 27 TSPVYSEWE 1 P Y W+ Sbjct: 628 EDPNYDMWD 636
>tr|Q21354|Q21354_CAEEL Protein K08F4.5, confirmed by transcript evidence OS=Caenorhabditis elegans GN=K08F4.5 PE=2 SV=1 Length = 215
Score = 36.6 bits (83), Expect = 0.72 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = -3
Query: 291 ELPKTSLPESRQEETLPISKEEEIVETLGTSDQGNEKKDAAYEGEVRLNELEGRKCG 121 E PK +PE ++EE +K+EE E ++ EKK+ + EGE + + E + G Sbjct: 70 EEPKEKVPEKKEEEKKDATKKEEAKEEKKEEERKEEKKEESKEGEKKNSGEEKKNSG 126
>tr|Q0CUA7|Q0CUA7_ASPTN Predicted protein OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_02727 PE=3 SV=1 Length = 548
Score = 36.2 bits (82), Expect = 0.94 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = -3
Query: 363 SSNDHNLSCSILDHFDTGKPLSGDELPKTSLPESRQEETLPISKEEEIVETLGTSDQG 190 +SND +LS LD + +P+ P+T PE+ + E E+++ E + +SD+G Sbjct: 113 ASNDTSLSRMRLDKLNHSEPVLSAARPQTPQPENTKREVESRENEKDVGEVIASSDEG 170
>tr|Q8UW88|Q8UW88_ORYLA Vitellogenin 1 OS=Oryzias latipes GN=Ol-vit1 PE=2 SV=1 Length = 1678
Score = 35.8 bits (81), Expect = 1.2 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = -3
Query: 303 LSGDELPKTSLPESRQEETLPISKEEEIVETLGTSDQGNEKKDAAYEGEVRLNE-LEGRK 127 ++G E+P+TSLP ++ I + EE V +S +E +++ + ++G+ Sbjct: 1488 VNGMEIPRTSLPYQHPTASIEIRENEEGVSVFASSHGLHEVYVNKTSWRIKIADWMKGKT 1547
Query: 126 CGLCG 112 CGLCG Sbjct: 1548 CGLCG 1552
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