BP918238
Clone id YMU001_000111_B05
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAACTATGCAGGAAGCATGTAGCAGCTAGTACCCACCACTTTGTGATGACTATGGTGATC
ACAGCTCTGAACAAATGGCATCCTCCATACATACATATATATATAAGAGCTATATGCTCC
CTTTCATTGTCAAATGCTTCCATTGATGAGGGTGTATTTGTGAGCTTCCTTACCTCATCT
TACACAACACCAGGCTCTATTACATGTTTCCAAGAACATCCATCCACCGCCGCCTGCTCT
CGATGCCTATTCACAAACAATCATCACATTATGCTTTGAATTACAAGCTTTCTTCCCCTG
GACGTATGAAATGATAGTGGTGGTAATGATGATGATGATGGTGATGCACAATCCCTTTGC
TAGAGTGCTTCTTAGCACTGCTGTAGATGAGCATGTAATCACTTGATGCAGAAATCCGGC
GCTCTCGGCAAGGCGATGGTGATTTCGAGTGGTTGTGCACAAGCTGCATTGCATGTGGCG
GTGACGGTAAGCTCTGGTAACCT
■■Homology search results ■■ -
sp_hit_id Q9WUL6
Definition sp|Q9WUL6|M3K14_MOUSE Mitogen-activated protein kinase kinase kinase 14 OS=Mus musculus
Align length 24
Score (bit) 31.2
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918238|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_B05.
(503 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9WUL6|M3K14_MOUSE Mitogen-activated protein kinase kinase ki... 31 2.9
sp|B0REP4|RS2_CLAMS 30S ribosomal protein S2 OS=Clavibacter mich... 30 8.3
sp|A5CQS5|RS2_CLAM3 30S ribosomal protein S2 OS=Clavibacter mich... 30 8.3

>sp|Q9WUL6|M3K14_MOUSE Mitogen-activated protein kinase kinase
kinase 14 OS=Mus musculus GN=Map3k14 PE=1 SV=1
Length = 942

Score = 31.2 bits (69), Expect = 2.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2

Query: 502 GYQSLPSPPHAMQLVHNHSKSPSP 431
G + LP PPH QL H S+ P P
Sbjct: 293 GQRPLPGPPHLSQLAHGDSQKPLP 316


>sp|B0REP4|RS2_CLAMS 30S ribosomal protein S2 OS=Clavibacter
michiganensis subsp. sepedonicus (strain ATCC 33113 /
JCM 9667) GN=rpsB PE=3 SV=1
Length = 320

Score = 29.6 bits (65), Expect = 8.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1

Query: 173 VRKLTNTPSSMEAFDNEREHIAL 105
+R LT TPS+M D ++EH+A+
Sbjct: 151 IRNLTKTPSAMWVVDTKKEHLAI 173


>sp|A5CQS5|RS2_CLAM3 30S ribosomal protein S2 OS=Clavibacter
michiganensis subsp. michiganensis (strain NCPPB 382)
GN=rpsB PE=3 SV=1
Length = 315

Score = 29.6 bits (65), Expect = 8.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1

Query: 173 VRKLTNTPSSMEAFDNEREHIAL 105
+R LT TPS+M D ++EH+A+
Sbjct: 151 IRNLTKTPSAMWVVDTKKEHLAI 173


tr_hit_id Q5N7L4
Definition tr|Q5N7L4|Q5N7L4_ORYSJ cDNA clone:002-101-F12, full insert sequence OS=Oryza sativa subsp. japonica
Align length 44
Score (bit) 34.3
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918238|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_B05.
(503 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5N7L4|Q5N7L4_ORYSJ cDNA clone:002-101-F12, full insert seque... 34 3.4
tr|A2ZWP0|A2ZWP0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.9

>tr|Q5N7L4|Q5N7L4_ORYSJ cDNA clone:002-101-F12, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0519D04.23 PE=2 SV=1
Length = 349

Score = 34.3 bits (77), Expect = 3.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2

Query: 487 PSPPHAMQLVHNHSKSPSPCRERRISASSDYMLIYSSAKKHSSK 356
P PPH HS+SPSP R R +SS S +++H S+
Sbjct: 74 PPPPHEPSRTGRHSRSPSPSRRHRTRSSSP-----SRSRRHRSR 112


>tr|A2ZWP0|A2ZWP0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_002962 PE=4 SV=1
Length = 349

Score = 32.7 bits (73), Expect = 9.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2

Query: 487 PSPPHAMQLVHNHSKSPSPCRERRISASS 401
P PPH HS+SPSP R R +SS
Sbjct: 74 PPPPHEPSRTGRHSRSPSPSRRHRTRSSS 102