BP918241 [AcEST]

BP918241
Clone id	YMU001_000111_B08
Library	YMU01
Length	345
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000111_B08.
Accession	BP918241
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2461Contig1
Sequence	AAAGGAGCAACTCAATTGGATAACAGAAGGAGACTCACGCAATTAGTTCCTTCTAGAACA ATCTCTCTATTTCCCACACAAGGAAATACACTAATCAGACTTCAGTGTTAGGCAGATACA ACCGTAACATTCCACATTAGAATGAAATTGTGCCTTTGGTAATATCTTTATGGTTTAATT CATCCATAAATTCTTTGTCCCATTAGGCTGTATCTCAACTATGGAATGTATCATAAGAAA CTCATGATAGATGGAAGCACACCTTGCAATCCTTTAAAAGGGATTTCTCGCCAAGAATTT TGTACAGTCCTAAACTTCAAGGGGGAGAGAAGAAAATGATGGATA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q98631
Definition	sp\|Q98631\|RDRP_RDVF RNA-directed RNA polymerase OS=Rice dwarf virus (isolate Fujian)
Align length	50
Score (bit)	28.9
E-value	8.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918241\|Adiantum capillus-veneris mRNA, clone: YMU001_000111_B08. (345 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q98631\|RDRP_RDVF RNA-directed RNA polymerase OS=Rice dwarf vi... 29 8.3 sp\|Q02119\|RDRP_RDVA RNA-directed RNA polymerase OS=Rice dwarf vi... 29 8.3 >sp\|Q98631\|RDRP_RDVF RNA-directed RNA polymerase OS=Rice dwarf virus (isolate Fujian) GN=S1 PE=3 SV=1 Length = 1444 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -3 Query: 316 SLGLYKILGEKSLLKDCKVCFHLSVSYDTFHSDTAWDKEFMDELNHK 167 SL Y + +K LL+D K+ HL V +F S D A +F LN K Sbjct: 1045 SLSAYYLKDQKDLLRDMKLGKHLEKVKGISFKSSDLAFSGSDFSQGLNLK 1094 >sp\|Q02119\|RDRP_RDVA RNA-directed RNA polymerase OS=Rice dwarf virus (isolate Akita) GN=S1 PE=2 SV=1 Length = 1444 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -3 Query: 316 SLGLYKILGEKSLLKDCKVCFHLSVSYDTFHSDTAWDKEFMDELNHK 167 SL Y + +K LL+D K+ HL V +F S D A +F LN K Sbjct: 1045 SLSAYYLKDQKDLLRDMKLGKHLEKVKGISFKSSDLAFSGSDFSQGLNLK 1094
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918241\|Adiantum capillus-veneris mRNA, clone: YMU001_000111_B08. (345 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****