BP918247
Clone id YMU001_000111_C03
Library
Length 349
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTACACAGCGCACAATGTCTTATACTAACTTGTGTACAGCTTGACAAATATCACAAGTTG
CAACCATCAATCAAAATTTGAAGGGAATCTATATATAAACTTATACAAGCTTTTGCTCGT
CTCACTACGAAAAAATAATGAGCCCAAGGGGGGTGATCTTCAAGTCTTTGTTTCGAGTAA
TATCTCTTCATTGCTCAAATGTGTGTGTATTGGCCATCTTTCCGGTCGTAATGTAGCAGG
TCCATGCTAAAGTAGTCAATTGCAATCATCCCTCCAATAAAAGTATTATGCAGAGGAGAG
TGCATGCACAAACAGCTTACTCTCCAAGTGTATATATCAGAAAAATCGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918247|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_C03.
(349 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q4Y5C1
Definition tr|Q4Y5C1|Q4Y5C1_PLACH Putative uncharacterized protein (Fragment) OS=Plasmodium chabaudi
Align length 112
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918247|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_C03.
(349 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4Y5C1|Q4Y5C1_PLACH Putative uncharacterized protein (Fragmen... 33 9.2
tr|A6USF3|A6USF3_METVS Peptidase U32 OS=Methanococcus vannielii ... 33 9.2

>tr|Q4Y5C1|Q4Y5C1_PLACH Putative uncharacterized protein (Fragment)
OS=Plasmodium chabaudi GN=PC000852.00.0 PE=4 SV=1
Length = 1076

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/112 (23%), Positives = 46/112 (41%)
Frame = +2

Query: 8 AHNVLY*LVYSLTNITSCNHQSKFEGNLYINLYKLLLVSLRKNNEPKGGDLQVFVSSNIS 187
++++ Y +Y L N +C + +LYI+ L+ N+ P +++ +I
Sbjct: 9 SNHISYEKLYILHNNLTCKNLCLITNDLYISTINRLM-----NDLPLHKSIKIMKYLSIK 63

Query: 188 SLLKCVCIGHLSGRNVAGPCXXXXXXXXXXXKYYAEESACTNSLLSKCIYQK 343
+ C+ I H+S A C YY E T LL +C +K
Sbjct: 64 KMALCININHMSFYFAAEICKSFNSPEIVDILYYLNEKN-TEILLKECDIKK 114


>tr|A6USF3|A6USF3_METVS Peptidase U32 OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=Mevan_1532 PE=4
SV=1
Length = 403

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2

Query: 53 TSCNHQSKFEGNLYINLYKLLLVSLRKNNEPKGGDLQVFVSSNISSLLKCVCIGHLSG 226
TSCN ++E I+ YK + V + N K G L+VF+++++ + + IG+ +G
Sbjct: 301 TSCNSDIQYEFEGNISRYKKVEVGIALNYYKKAGVLEVFLTNDLKIGDEILIIGNTTG 358