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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918249
Clone id YMU001_000111_C06
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTAACCAATCTTCTCATTTTCATTTGCTCCCTCATTTTCCTTATCATCTTAAGAATGTTG
TGCCCCATAAAGAGCTGAATGACACTGCAGAAACTAGAAGCCGCAAGCAGAACTTGTATC
CTTGGATTTGCAAACTCAACTGGAAGTAGCCTATGAGCATCCCTCATTGATATCCAAGTG
TGGCCTCGTAACTCCTAAACTCAAATTACCTCTTTCTTTGAGCTGTGAGGTACGAAGATA
GAGATTTGTGCATGTAATGACCAATCTCTTCGTACCCAGAGATTTAAGCGTCTAACGACT
GACTTCTTTGTACCCTTCTCTCGGGATAGTCTACATATGCTGTGTGTCCTGGGGATCTGA
GCTGCTTTGCCAACCTCCATTTGAAGGCAGTGTGATGATACTCTAAGCTGACCAATCGGC
ACCCTTGCACCATGTACCTGGGTCTTCCGTCCCCTGAGATGCCCATGACGCGTTGTCTGT
AGTATGCATCTTCG
■■Homology search results ■■ -
sp_hit_id Q84S11
Definition sp|Q84S11|CSLF2_ORYSJ Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica
Align length 24
Score (bit) 32.7
E-value 0.93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918249|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_C06.
         (494 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q84S11|CSLF2_ORYSJ Mixed-linked glucan synthase 2 OS=Oryza sa...    33   0.93 
sp|Q6ZF89|CSLF1_ORYSJ Putative mixed-linked glucan synthase 1 OS...    33   0.93 
sp|Q7Z7H8|RM10_HUMAN 39S ribosomal protein L10, mitochondrial OS...    31   2.7  
sp|Q12GW8|RL2_POLSJ 50S ribosomal protein L2 OS=Polaromonas sp. ...    31   2.7  
sp|A1VIQ3|RL2_POLNA 50S ribosomal protein L2 OS=Polaromonas naph...    31   2.7  
sp|A8GC31|MAO1_SERP5 NAD-dependent malic enzyme OS=Serratia prot...    31   2.7  
sp|Q3MHY7|RM10_BOVIN 39S ribosomal protein L10, mitochondrial OS...    30   6.0  
sp|Q6QZN6|DACT1_DANRE Dapper homolog 1 OS=Danio rerio GN=dact1 P...    30   7.9  

>sp|Q84S11|CSLF2_ORYSJ Mixed-linked glucan synthase 2 OS=Oryza
           sativa subsp. japonica GN=CSLF2 PE=2 SV=1
          Length = 889

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 486 HTTDNASWASQGTEDPGTWCKGAD 415
           H  +NA+W + GT  PGTW + AD
Sbjct: 302 HAGENATWMADGTHWPGTWFEPAD 325


>sp|Q6ZF89|CSLF1_ORYSJ Putative mixed-linked glucan synthase 1
           OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1
          Length = 860

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 486 HTTDNASWASQGTEDPGTWCKGAD 415
           H  +NA+W + GT  PGTW + AD
Sbjct: 272 HAGENATWMADGTHWPGTWFEPAD 295


>sp|Q7Z7H8|RM10_HUMAN 39S ribosomal protein L10, mitochondrial
           OS=Homo sapiens GN=MRPL10 PE=1 SV=3
          Length = 261

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 155 HRLLPVEFANPRIQVLLAASSFCSVIQLFMGHNILKMIR--KMREQMKMRRLV 3
           H++L   F N  ++  L  S + +++ LF+GHN+L +    K++E +++ R V
Sbjct: 119 HKILMKVFPNQVLKPFLEDSKYQNLLPLFVGHNMLLVSEEPKVKEMVRILRTV 171


>sp|Q12GW8|RL2_POLSJ 50S ribosomal protein L2 OS=Polaromonas sp.
           (strain JS666 / ATCC BAA-500) GN=rplB PE=3 SV=1
          Length = 274

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = -1

Query: 431 GARVPIGQLRVSS--HCLQMEVGKAAQIPRT--HSICRLSREKGTKKSVVRR 288
           G  +PI  + V S  HC++M++GK AQI R+   S   L+RE GT   V  R
Sbjct: 127 GNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLARE-GTYAQVRMR 177


>sp|A1VIQ3|RL2_POLNA 50S ribosomal protein L2 OS=Polaromonas
           naphthalenivorans (strain CJ2) GN=rplB PE=3 SV=1
          Length = 274

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = -1

Query: 431 GARVPIGQLRVSS--HCLQMEVGKAAQIPRT--HSICRLSREKGTKKSVVRR 288
           G  +PI  + V S  HC++M++GK AQI R+   S   L+RE GT   V  R
Sbjct: 127 GNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLARE-GTYAQVRMR 177


>sp|A8GC31|MAO1_SERP5 NAD-dependent malic enzyme OS=Serratia
           proteamaculans (strain 568) GN=sfcA PE=3 SV=1
          Length = 565

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 443 TQVHGARVP-IGQLRVSSHCLQMEVGKAAQIPRTHSICRLSREKGTKKSVVRRLNLW 276
           T  HGA +P I  ++  S C+ MEVGKAAQ+     +  ++ E+   K++    N W
Sbjct: 502 TDGHGALLPDIDDIQGVSKCIAMEVGKAAQL---QGMAVVTSEEALSKAIEH--NFW 553


>sp|Q3MHY7|RM10_BOVIN 39S ribosomal protein L10, mitochondrial
           OS=Bos taurus GN=MRPL10 PE=1 SV=2
          Length = 262

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 155 HRLLPVEFANPRIQVLLAASSFCSVIQLFMGHNILKMIR--KMREQMKMRRLV 3
           H++L   F N  ++  L  S + +++ LF+GHN+L +    K++E +++ + V
Sbjct: 119 HKILMKVFPNQILKPFLEDSKYQNLLPLFVGHNLLLVSEEPKVKEMVRILKSV 171


>sp|Q6QZN6|DACT1_DANRE Dapper homolog 1 OS=Danio rerio GN=dact1 PE=1
           SV=1
          Length = 821

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 462 ASQGTEDPGTWCKGADWSA*SIITLPSNGGWQSSSDPQDT 343
           AS  + +P T      WSA S    P NG + SSS PQ++
Sbjct: 388 ASATSTEPSTASPQRQWSAESKGGTPQNGAYLSSSQPQNS 427
tr_hit_id Q2UES2
Definition tr|Q2UES2|Q2UES2_ASPOR Gamma-tubulin complex OS=Aspergillus oryzae
Align length 25
Score (bit) 33.1
E-value 7.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918249|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_C06.
         (494 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2UES2|Q2UES2_ASPOR Gamma-tubulin complex OS=Aspergillus oryz...    33   7.3  
tr|B8P3B3|B8P3B3_9APHY Predicted protein OS=Postia placenta Mad-...    33   7.3  
tr|B8NG88|B8NG88_ASPFL Spindle pole body component (Alp4), putat...    33   7.3  
tr|A2BM60|A2BM60_HYPBU Conserved archaeal protein OS=Hyperthermu...    33   7.3  
tr|B8B790|B8B790_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.5  
tr|A3BL00|A3BL00_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.5  
tr|Q5K872|Q5K872_CRYNE Expressed protein (Putative uncharacteriz...    33   9.5  
tr|Q5B0Q7|Q5B0Q7_EMENI Putative uncharacterized protein OS=Emeri...    33   9.5  

>tr|Q2UES2|Q2UES2_ASPOR Gamma-tubulin complex OS=Aspergillus oryzae
           GN=AO090026000505 PE=4 SV=1
          Length = 884

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 305 KSVVRRLNLWVRRDWSLHAQISIFV 231
           KS  RRL LW RR W+L A++ +FV
Sbjct: 689 KSTDRRLELWKRRAWNLRAKMLVFV 713


>tr|B8P3B3|B8P3B3_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_97267 PE=4 SV=1
          Length = 407

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -1

Query: 374 VGKAAQIPRTHSICRLSR-----EKGTKKSVVRRLNLWVRRDWSLHAQISIFVPHSSKKE 210
           VG A QIPRTHS    SR      KG     +  L+LW  +  + +   S F+  S ++ 
Sbjct: 47  VGNAFQIPRTHSWITYSRLAEQYGKGALSMQIALLSLWPEKCMTFYIYFSTFILKSPQRR 106

Query: 209 VI 204
            +
Sbjct: 107 FV 108


>tr|B8NG88|B8NG88_ASPFL Spindle pole body component (Alp4), putative
           OS=Aspergillus flavus NRRL3357 GN=AFLA_134280 PE=4 SV=1
          Length = 884

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 305 KSVVRRLNLWVRRDWSLHAQISIFV 231
           KS  RRL LW RR W+L A++ +FV
Sbjct: 689 KSTDRRLELWKRRAWNLRAKMLVFV 713


>tr|A2BM60|A2BM60_HYPBU Conserved archaeal protein OS=Hyperthermus
           butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_1239 PE=4
           SV=1
          Length = 328

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = -3

Query: 366 SSSDPQDTQHM*TIPREGYKEVSR*TLKSL---GTKRLVITCTNLYLRTSQLKERGNLSL 196
           +SSDP         P E Y +++R TL+ L   G K L+IT  +L  R + L  RGN ++
Sbjct: 90  TSSDPYP-------PEEEYYKLTRWTLEQLLPRGFKVLIITKGSLVARDTDLLSRGNAAV 142

Query: 195 GVTRPHLD 172
            +T   LD
Sbjct: 143 TMTITTLD 150


>tr|B8B790|B8B790_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26428 PE=4 SV=1
          Length = 792

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 486 HTTDNASWASQGTEDPGTWCKGAD 415
           H  +NA+W + GT  PGTW + AD
Sbjct: 302 HAGENATWMADGTHWPGTWFEPAD 325


>tr|A3BL00|A3BL00_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_023722 PE=4 SV=1
          Length = 859

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 486 HTTDNASWASQGTEDPGTWCKGAD 415
           H  +NA+W + GT  PGTW + AD
Sbjct: 272 HAGENATWMADGTHWPGTWFEPAD 295


>tr|Q5K872|Q5K872_CRYNE Expressed protein (Putative uncharacterized
           protein) OS=Cryptococcus neoformans GN=CNBI0140 PE=4
           SV=1
          Length = 422

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 453 GTEDPGTWCKGADWSA*SIITLPSNGGWQSSSDPQDTQ 340
           GT DP  W  G  W+A  ++ + +   W + SD  D+Q
Sbjct: 227 GTSDPNLWATGNGWAAAGMLRVWATINWSTFSDQLDSQ 264


>tr|Q5B0Q7|Q5B0Q7_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN5873.2 PE=4 SV=1
          Length = 893

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 305 KSVVRRLNLWVRRDWSLHAQISIFV 231
           KS  RRL LW RR W+L A++ +F+
Sbjct: 681 KSTDRRLELWKRRAWNLRAKMLVFI 705