BP918255
Clone id YMU001_000111_D01
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATCGACACAAATGGGCCTTCGAGCACCACTCAGATGCATTCAAATCCATGACCCGAGTC
ACGAAGGTCGAATGCTTCAACTGATTGAGCTAGCTCTCGTCAGCAACCCTTTCCTTTAAA
AAAAAAAACAGAACTCACATTGCCAAAGGGGTGAAGCACGAGCATTCGCGCTCGGAAGCA
ACAAATGTGCCTTTGGATATCACTCATATTCATTTGGACCCATGACCCTGGTCACGAAGG
CCAAATGCTTCAACCAAATGAGCTAACTTTCATCGACACAAATGCGCCTTTGAGCACCAC
TCAACTGCGTTCGAAGCCATGACCCGAGTCACGAAGGTCGAATGTTTCAACTGATTGAGC
TAGCTATGGTCAGCAACCCTTTCCTTAGAAAAAAAAAACAGAACTCACATTGCCAAAGGG
ATAAAGTATGAGCATTCCTGCTCGTAAGCAACAAATGTGCCTTTGGATATCACTCAAATT
CATTTGGACTGGTCATGAAGGCCAAATGCTTCAACCAAATGAGCTAACTTTCAT
■■Homology search results ■■ -
sp_hit_id Q8WHL6
Definition sp|Q8WHL6|MATK_LEMGI Maturase K OS=Lemna gibba
Align length 102
Score (bit) 29.6
E-value 9.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918255|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_D01.
(534 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8WHL6|MATK_LEMGI Maturase K OS=Lemna gibba GN=matK PE=3 SV=1 30 9.5

>sp|Q8WHL6|MATK_LEMGI Maturase K OS=Lemna gibba GN=matK PE=3 SV=1
Length = 512

Score = 29.6 bits (65), Expect = 9.5
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = -3

Query: 412 QCEFCFFFLRKGLLTIASSIS*NIRPS*LGSWLRTQLSGAQRRI----CVDES*LIWLKH 245
+CE F+FLRK + S+ + RP RT G + I C D +WL
Sbjct: 223 ECESIFYFLRKSSSYLRST---SFRPL----LERTHFYGKMKHIGVTCCNDFQKTLWLFK 275

Query: 244 LAFVTRVMGPNEYE*YPKA-HLLLPSANARASPLWQCEFCFF 122
F+ V + K HLL+ + LWQC F F+
Sbjct: 276 DPFMHYVRYQGKCIIASKGTHLLMKKWKSYFVNLWQCHFHFW 317


tr_hit_id Q08Q27
Definition tr|Q08Q27|Q08Q27_STIAU Serine/threonine kinase PKN11 OS=Stigmatella aurantiaca DW4/3-1
Align length 56
Score (bit) 34.3
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918255|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_D01.
(534 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q08Q27|Q08Q27_STIAU Serine/threonine kinase PKN11 OS=Stigmate... 34 4.2

>tr|Q08Q27|Q08Q27_STIAU Serine/threonine kinase PKN11 OS=Stigmatella
aurantiaca DW4/3-1 GN=STIAU_6708 PE=4 SV=1
Length = 990

Score = 34.3 bits (77), Expect = 4.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1

Query: 139 IAKGVKHEHSRSEATNVPLDITHIHLDP*PWSRRPNASTK*ANFHRHKCAFEHHST 306
+A G+ + HSR ++T PL+I H ++P N K A+F K A H T
Sbjct: 96 VADGLAYAHSRMDSTGAPLNIVHRDVNPSNVMIGSNGEVKLADFGIAKVADGHQET 151