BP918261 |
Clone id |
YMU001_000111_D08 |
Library |
YMU01 |
Length |
348 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000111_D08. |
Accession |
BP918261 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCGGGCCTGTAAAAGTCGCTCCTAAGTATACATAAGACCGTACCTGCTCCACCATCTCCC CTCTAAATGTGAACTGATGCTCTGCTCGAGTGACCAAGGCCTGTGTGGTGTTGAACACCA TAACCTTGGTTTTCCCAAGGTTCACTATCAAGTCCCTATCTGCACAAAATCTCTGGAGAG CATCCAACTGTCTCTGTAGCCCCTCTGGAGAGTCCGAAATCAATACCACATCGTCTGCAT ACAAAAGAAGTGGTATCATCAGCCCTGCCAGGGTGGATCCTGCATCATCATATGTATCCA CATACTCTGAGAGCTCATCGATGTAAATCCCGAAGAGAGTGGGAGACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q05118 |
Definition |
sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica |
Align length |
117 |
Score (bit) |
43.1 |
E-value |
0.0004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2WBW5 |
Definition |
tr|Q2WBW5|Q2WBW5_PLADU Putative origin recognition complex subunit 3 protein OS=Platynereis dumerilii |
Align length |
113 |
Score (bit) |
72.8 |
E-value |
8.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918261|Adiantum capillus-veneris mRNA, clone: YMU001_000111_D08. (348 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2WBW5|Q2WBW5_PLADU Putative origin recognition complex subun... 73 8e-12 tr|A7SDI1|A7SDI1_NEMVE Predicted protein OS=Nematostella vectens... 65 1e-09 tr|A8PDH4|A8PDH4_COPC7 Putative uncharacterized protein OS=Copri... 60 5e-08 tr|O64463|O64463_CHLVU Gene, , similar to reverse transcriptase ... 57 3e-07 tr|A8P1J7|A8P1J7_COPC7 Putative uncharacterized protein OS=Copri... 56 8e-07 tr|A8NHL8|A8NHL8_COPC7 Predicted protein OS=Coprinopsis cinerea ... 53 9e-06 tr|Q49P02|Q49P02_IXOSC Reverse transcriptase-like protein (Fragm... 49 1e-04 tr|O44321|O44321_TENMO Reverse transcriptase (Fragment) OS=Teneb... 49 1e-04 tr|A4KWG0|A4KWG0_OSTNU Reverse transcriptase OS=Ostrinia nubilal... 49 2e-04 tr|A4KWF2|A4KWF2_OSTNU Reverse transcriptase OS=Ostrinia nubilal... 49 2e-04 tr|A4KWF4|A4KWF4_OSTNU Reverse transcriptase OS=Ostrinia nubilal... 48 2e-04 tr|B6PIV8|B6PIV8_BRAFL Putative uncharacterized protein OS=Branc... 47 4e-04 tr|Q9YW31|Q9YW31_MSEPV ORF MSV061 putative LINE reverse transcri... 47 6e-04 tr|Q49P03|Q49P03_BOOMI Reverse transcriptase-like protein (Fragm... 47 6e-04 tr|B6NHS4|B6NHS4_BRAFL Putative uncharacterized protein OS=Branc... 47 6e-04 tr|B6L490|B6L490_BRAFL Putative uncharacterized protein OS=Branc... 46 0.001 tr|B7QB19|B7QB19_IXOSC Reverse transcriptase, putative OS=Ixodes... 45 0.002 tr|O16589|O16589_CAEEL Putative uncharacterized protein F21E9.5 ... 45 0.002 tr|A0JNH2|A0JNH2_BOVIN Catenin, alpha OS=Bos taurus GN=LOC780777... 44 0.004 tr|B7PS21|B7PS21_IXOSC Reverse transcriptase, putative OS=Ixodes... 44 0.005 tr|Q9TZX4|Q9TZX4_CAEEL Reverse transcriptase OS=Caenorhabditis e... 43 0.009 tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Sch... 43 0.009 tr|B7PZY1|B7PZY1_IXOSC Putative uncharacterized protein OS=Ixode... 43 0.009 tr|O44323|O44323_FORAU Reverse transcriptase (Fragment) OS=Forfi... 42 0.012 tr|Q30KW9|Q30KW9_SCHMA Reverse transcriptase SR3-right (Fragment... 42 0.020 tr|Q76IP1|Q76IP1_CIOIN Reverse transcriptase OS=Ciona intestinal... 41 0.026 tr|O44316|O44316_DROMR Reverse transcriptase domain protein (Fra... 41 0.026 tr|A7SVR1|A7SVR1_NEMVE Predicted protein (Fragment) OS=Nematoste... 41 0.026 tr|Q9BPN2|Q9BPN2_CAEEL Putative uncharacterized protein OS=Caeno... 41 0.034 tr|Q4QQD8|Q4QQD8_SCHMA Polyprotein OS=Schistosoma mansoni PE=2 SV=1 41 0.034
>tr|Q2WBW5|Q2WBW5_PLADU Putative origin recognition complex subunit 3 protein OS=Platynereis dumerilii GN=orcs3 PE=4 SV=1 Length = 966
Score = 72.8 bits (177), Expect = 8e-12 Identities = 42/113 (37%), Positives = 65/113 (57%) Frame = -3
Query: 346 SPTLFGIYIDELSEYVDTYDDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRF 167 SP LF Y+ +L++Y+D G T+ ++ LLYADD+VL S+S +GLQ ++ L F Sbjct: 39 SPNLFTEYLTDLNKYLDV--SQGITIGDNIVTHLLYADDMVLCSESAKGLQILINGLYTF 96
Query: 166 CADRDLIVNLGKTKVMVFNTTQALVTRAEHQFTFRGEMVEQVRSYVYLGATFT 8 C LI+++ KT VMVF + +V QF + + + +Y YLG F+ Sbjct: 97 CTKWHLILSINKTNVMVFRKKREIV---NFQFKYGVDEIAITDNYKYLGVIFS 146
>tr|A7SDI1|A7SDI1_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g210604 PE=4 SV=1 Length = 1079
Score = 65.5 bits (158), Expect = 1e-09 Identities = 33/86 (38%), Positives = 49/86 (56%) Frame = -3
Query: 265 GLMIPLLLYADDVVLISDSPEGLQRQLDALQRFCADRDLIVNLGKTKVMVFNTTQALVTR 86 G+ + L YADD+VLIS S GLQ+ ++ + +FC D + VN KTKV++ + Sbjct: 531 GVPLNSLFYADDLVLISTSASGLQKSINLIDQFCKDWLMSVNQKKTKVVIIQKQCRKLNL 590
Query: 85 AEHQFTFRGEMVEQVRSYVYLGATFT 8 + +F G ++ V Y YLG TFT Sbjct: 591 QKFRFFLNGSQLDNVTEYKYLGCTFT 616
>tr|A8PDH4|A8PDH4_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_09484 PE=4 SV=1 Length = 1355
Score = 60.1 bits (144), Expect = 5e-08 Identities = 37/109 (33%), Positives = 60/109 (55%) Frame = -3
Query: 346 SPTLFGIYIDELSEYVDTYDDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRF 167 SP L+ +Y+ +L +++ DD L + L ADD++L+S + GLQR++ L R+ Sbjct: 408 SPILWVLYMADLPQWIPN-DDDDVVLGTTPVTNLEQADDILLLSTTARGLQRKMSGLFRW 466
Query: 166 CADRDLIVNLGKTKVMVFNTTQALVTRAEHQFTFRGEMVEQVRSYVYLG 20 C +I+N K++VMVF T + QF F E+V V + Y+G Sbjct: 467 CGRNFMIINSVKSEVMVFGTRSTDMP----QFRFGDEVVSVVDAQSYIG 511
>tr|O64463|O64463_CHLVU Gene, , similar to reverse transcriptase genes of various retrotransposons OS=Chlorella vulgaris PE=4 SV=1 Length = 191
Score = 57.4 bits (137), Expect = 3e-07 Identities = 30/87 (34%), Positives = 49/87 (56%) Frame = -3
Query: 265 GLMIPLLLYADDVVLISDSPEGLQRQLDALQRFCADRDLIVNLGKTKVMVFNTTQALVTR 86 G +P L YADD L++ +P LQR +DA FC +++++ KTK++VF+++ Sbjct: 31 GSCVPDLGYADDFALLATTPAHLQRLIDAAAEFCEQTGMVISVDKTKIVVFSSS----LP 86
Query: 85 AEHQFTFRGEMVEQVRSYVYLGATFTG 5 Q+ G + V+ + YLGA F G Sbjct: 87 GPFQWLCGGAPLHWVQQFEYLGAPFDG 113
>tr|A8P1J7|A8P1J7_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05593 PE=4 SV=1 Length = 813
Score = 56.2 bits (134), Expect = 8e-07 Identities = 33/109 (30%), Positives = 56/109 (51%) Frame = -3
Query: 346 SPTLFGIYIDELSEYVDTYDDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRF 167 SP L+ +Y+ +L +Y+ D+ L + + L ADD++L+S GLQR++ L R+ Sbjct: 447 SPILWVLYMADLPDYIPN-DEDDIVLGSVAVTSLEQADDILLLSTCAAGLQRKMSGLYRW 505
Query: 166 CADRDLIVNLGKTKVMVFNTTQALVTRAEHQFTFRGEMVEQVRSYVYLG 20 C +++N K++VM+F T +F F G V Y+G Sbjct: 506 CGVNFMVINNVKSEVMIFGPK----TSQLPEFHFGGTTVSVTEKQSYIG 550
>tr|A8NHL8|A8NHL8_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_12170 PE=4 SV=1 Length = 412
Score = 52.8 bits (125), Expect = 9e-06 Identities = 32/90 (35%), Positives = 48/90 (53%) Frame = -3
Query: 289 DDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRFCADRDLIVNLGKTKVMVFN 110 DD L + L ADD++L+S + GLQR++ L R+C +I+N K++VMVF Sbjct: 11 DDDDVVLGTTPVTNLEQADDILLLSTTARGLQRKMSGLFRWCGRNFMIINSVKSEVMVFG 70
Query: 109 TTQALVTRAEHQFTFRGEMVEQVRSYVYLG 20 T + QF F E+V V + Y+G Sbjct: 71 TRSTDMP----QFRFGDEVVSVVDAQSYIG 96
>tr|Q49P02|Q49P02_IXOSC Reverse transcriptase-like protein (Fragment) OS=Ixodes scapularis PE=4 SV=1 Length = 513
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -3
Query: 343 PTLFGIYIDELSEYVDTYDDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRFC 164 P LF + +DE + +D G + L + + +ADD+++ + +PEGLQR+LD+L F Sbjct: 1 PLLFNLVVDEFLQTLDP--GIGYSSDQLQLDGMAFADDLIVFASTPEGLQRRLDSLHSFV 58
Query: 163 ADRDLIVNLGKT 128 R L +N K+ Sbjct: 59 GARGLAINAEKS 70
>tr|O44321|O44321_TENMO Reverse transcriptase (Fragment) OS=Tenebrio molitor GN=R2 ORF PE=4 SV=1 Length = 469
Score = 48.9 bits (115), Expect = 1e-04 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Frame = -3
Query: 241 YADDVVLISDSPEGLQRQLDALQRFCADRDLIVNLGKTKVMVFNT---TQALVTRAEHQF 71 YADD++L++D+ E QR L+A RF DR L +N K + +V T + + T QF Sbjct: 2 YADDIILLADNVETAQRLLNASTRFFEDRGLDINPAKCESLVMRTLPSKKKVFTVTTPQF 61
Query: 70 TFRGEMVEQV---RSYVYLGATFT 8 + E ++ + +++ YLG FT Sbjct: 62 YVKAEPIKPIEVGKAFKYLGQQFT 85
>tr|A4KWG0|A4KWG0_OSTNU Reverse transcriptase OS=Ostrinia nubilalis PE=4 SV=1 Length = 497
Score = 48.5 bits (114), Expect = 2e-04 Identities = 35/111 (31%), Positives = 60/111 (54%) Frame = -3
Query: 346 SPTLFGIYIDELSEYVDTYDDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRF 167 SP LF ++++ + +D ++ G + G I L +ADD+V+++++ E L LD L R Sbjct: 209 SPKLFTTALEDVFKLLD-WNGFGININGEYITHLRFADDIVVMAETVEDLNTMLDGLSRA 267
Query: 166 CADRDLIVNLGKTKVMVFNTTQALVTRAEHQFTFRGEMVEQVRSYVYLGAT 14 L +N+ KTK+M + + + T + T +E V +YVYLG T Sbjct: 268 SQQVGLKMNMDKTKIM--SNARVVPTPLKVGDT----TLELVDNYVYLGQT 312
>tr|A4KWF2|A4KWF2_OSTNU Reverse transcriptase OS=Ostrinia nubilalis PE=4 SV=1 Length = 478
Score = 48.5 bits (114), Expect = 2e-04 Identities = 35/111 (31%), Positives = 60/111 (54%) Frame = -3
Query: 346 SPTLFGIYIDELSEYVDTYDDAGSTLAGLMIPLLLYADDVVLISDSPEGLQRQLDALQRF 167 SP LF ++++ + +D ++ G + G I L +ADD+V+++++ E L LD L R Sbjct: 190 SPKLFTTALEDVFKLLD-WNGFGININGEYITHLRFADDIVVMAETVEDLNTMLDGLSRA 248
Query: 166 CADRDLIVNLGKTKVMVFNTTQALVTRAEHQFTFRGEMVEQVRSYVYLGAT 14 L +N+ KTK+M + + + T + T +E V +YVYLG T Sbjct: 249 SQQVGLKMNMDKTKIM--SNARVVPTPLKVGDT----TLELVDNYVYLGQT 293
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