BP918263
Clone id YMU001_000111_D10
Library
Length 393
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGCTGGACGACATGAGGTATGCAGGTGCATGAGATGACATCTAGTGGCGTAAGGAGGTC
GAATGGGGTCAATACTTGCACGTGGATAAGTACGAACACAACGTGGGTACTTTCTTGTGA
TAATTATGCAAAAAGTCCATCATGAGAACCGTATCTGGGGACCACTTCACATGGTTGTGG
GATGTATTATTGGAAAAAATTGAGTGCCAGCTGTGTAGATGGATGCAGCAGGGTGACAAC
TATGCACTGCGAGGCCACTTCTTGGCCTGTTCGGGGTCCGTTTGAGGTCAACTAAAAGGC
CAAAGGTACCCAAGTCATAAAGCTAAGTGTGGGAACTGAAAAACCTGAGAGAAGATCAGA
AAAAACCATGGAGAGAACAGGAGGAACAGACGC
■■Homology search results ■■ -
sp_hit_id Q8NBF1
Definition sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens
Align length 25
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918263|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_D10.
(393 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens ... 30 2.9
sp|O05410|YRPE_BACSU Uncharacterized protein yrpE OS=Bacillus su... 29 6.4
sp|Q20762|YAO6_CAEEL Uncharacterized protein F54D1.6 OS=Caenorha... 29 8.3

>sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens
GN=GLIS1 PE=2 SV=2
Length = 620

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1

Query: 279 GPRTGQEVASQCIVVTLLHPSTQLA 205
GP T +V ++C+V+ LH STQLA
Sbjct: 360 GPDTEADVLTECLVLQQLHTSTQLA 384


>sp|O05410|YRPE_BACSU Uncharacterized protein yrpE OS=Bacillus
subtilis GN=yrpE PE=3 SV=1
Length = 251

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2

Query: 206 HSIFSNNTSHNHVKWSPDTVLMMDFLHNYHKKVPT 102
HSI+ SH H+ W D ++D + N+ P+
Sbjct: 203 HSIYPTKASHYHLYWGDDREALLDEVKNWPTYYPS 237


>sp|Q20762|YAO6_CAEEL Uncharacterized protein F54D1.6
OS=Caenorhabditis elegans GN=F54D1.6 PE=1 SV=4
Length = 1423

Score = 28.9 bits (63), Expect = 8.3
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Frame = +1

Query: 169 TWL------WDVLLEKIECQLCRWM----QQGDNYALRGHFLACSGSV*GQLKGQRYPSH 318
TWL + VL+ I LC W+ ++G+ RG+ +A S+ G G++YP H
Sbjct: 1321 TWLAIIGGIFGVLVFVILIFLCCWIVKQKKKGEAAERRGYDMASRSSMTGSRGGKKYPIH 1380

Query: 319 KAK 327
+++
Sbjct: 1381 ESE 1383


tr_hit_id B6AHQ7
Definition tr|B6AHQ7|B6AHQ7_9CRYT Putative uncharacterized protein OS=Cryptosporidium muris RN66
Align length 45
Score (bit) 38.1
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918263|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_D10.
(393 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6AHQ7|B6AHQ7_9CRYT Putative uncharacterized protein OS=Crypt... 38 0.22
tr|B8C496|B8C496_THAPS 3',5'-cyclic amp phosphodiesterase (Fragm... 35 1.9
tr|Q49HK0|Q49HK0_9BACT ORF2 OS=uncultured bacterial symbiont of ... 34 4.1
tr|B7RUC3|B7RUC3_9GAMM ApbE family protein OS=marine gamma prote... 33 7.1
tr|B8LIH3|B8LIH3_9MARC CysA OS=Aneura pinguis GN=cysA PE=4 SV=1 33 9.2
tr|B8LIG9|B8LIG9_9MARC CysA OS=Aneura sp. Shaw 670 GN=cysA PE=4 ... 33 9.2

>tr|B6AHQ7|B6AHQ7_9CRYT Putative uncharacterized protein
OS=Cryptosporidium muris RN66 GN=CMU_006750 PE=4 SV=1
Length = 223

Score = 38.1 bits (87), Expect = 0.22
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2

Query: 92 TNTTWVLSCDNYAKSPS*EPYLGTTSHGCGMYYWKKLSASCVDGC 226
T W+L D S + +P L S C +YYW K++ SC +GC
Sbjct: 19 TCLAWILYFDIIPSSTNQDPSLSIES--CNIYYWTKINTSCFEGC 61


>tr|B8C496|B8C496_THAPS 3',5'-cyclic amp phosphodiesterase
(Fragment) OS=Thalassiosira pseudonana CCMP1335
GN=THAPSDRAFT_262976 PE=4 SV=1
Length = 332

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2

Query: 170 VKWSPDTVLMMDFLHNYHKKVPTLCSYL 87
V W+P+ DF+ NY K+PTLCS+L
Sbjct: 25 VGWAPECQDGYDFVSNYEVKIPTLCSFL 52


>tr|Q49HK0|Q49HK0_9BACT ORF2 OS=uncultured bacterial symbiont of
Discodermia dissoluta PE=3 SV=1
Length = 709

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1

Query: 207 ALNFFQ*YIPQPCEVVPRYGSHDGLFA*LSQESTHVVFVLIHVQVLTPFDLLTPLDVI 34
AL ++ + V+ + SH GL + Q++ +V VL V+V PFD L P D +
Sbjct: 180 ALGMVLYFLAEKLLVITQERSHQGLISIFGQQARYVWVVLDDVEVEVPFDQLQPGDTV 237


>tr|B7RUC3|B7RUC3_9GAMM ApbE family protein OS=marine gamma
proteobacterium HTCC2148 GN=apbE PE=4 SV=1
Length = 335

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -1

Query: 276 PRTGQEVASQCIVVTLLHPSTQLA 205
PRTG VA + + VT++HPST LA
Sbjct: 258 PRTGYPVAHELVSVTVIHPSTMLA 281


>tr|B8LIH3|B8LIH3_9MARC CysA OS=Aneura pinguis GN=cysA PE=4 SV=1
Length = 376

Score = 32.7 bits (73), Expect = 9.2
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +1

Query: 130 KKSIMRTVSG----DHFT-WLWDVLLEKIECQLCRWMQQGDNYALRGHFLACSGSV*GQL 294
K S++R ++G DH + WL + + + Q R NYAL H G L
Sbjct: 41 KSSLLRIIAGLDDCDHGSIWLRGIDMTTVSTQYRRMSFVFQNYALFKHMTVYENISFG-L 99

Query: 295 KGQRYPSHKAK 327
K +RYPSHK K
Sbjct: 100 KLRRYPSHKIK 110


>tr|B8LIG9|B8LIG9_9MARC CysA OS=Aneura sp. Shaw 670 GN=cysA PE=4
SV=1
Length = 376

Score = 32.7 bits (73), Expect = 9.2
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +1

Query: 130 KKSIMRTVSG----DHFT-WLWDVLLEKIECQLCRWMQQGDNYALRGHFLACSGSV*GQL 294
K S++R ++G DH + WL + + + Q R NYAL H G L
Sbjct: 41 KSSLLRIIAGLDDCDHGSIWLRGIDMTTVSTQYRRMSFVFQNYALFKHMTVYENISFG-L 99

Query: 295 KGQRYPSHKAK 327
K +RYPSHK K
Sbjct: 100 KLRRYPSHKIK 110