BP918267
Clone id YMU001_000111_E02
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTCACTCCAGCAAGAGTGAGTGAATATTATATTAAAATCACCAAAAAATGACTCCAGCTC
CATGCTCCAACCGAGCCATGGAGGACATCAGCATACCTAAACATCAACCATATCAGTCCA
CAAGTGAGCTTTTTACAAGGAAGCTCAAAACCGGTACATCAAGTGCTTAATTCTGACTGG
CCTTTAGCTTATAACAGAGAATACTACCACTCAAATGGGTGCCACCATGACATACCTTCT
CCCACAAGGGCTGCCATGCCCGGGTCAAGCAGTAGCGACGAAGATTCGGAGAGAATGTAA
GCCGTAGAAGAGAGAACCAATACCGCTGATGAAGAGGTCAAAACATGCCGCACACACACC
GAAGAACCACTTGGTTGCCACCCACCGGAAAGCCCTGCCACTGCCTTCAAGTGTGTGTAA
GATCGTCCCAGTATGTTGTTTGCCATCCCCGAACCCAGATGCCAGATGAAGCCGCTTCAC
C
■■Homology search results ■■ -
sp_hit_id Q9ZPY2
Definition sp|Q9ZPY2|LAC6_ARATH Laccase-6 OS=Arabidopsis thaliana
Align length 86
Score (bit) 35.0
E-value 0.18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918267|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_E02.
(481 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZPY2|LAC6_ARATH Laccase-6 OS=Arabidopsis thaliana GN=LAC6 P... 35 0.18
sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2 29 9.8
sp|B0C8D6|SYE_ACAM1 Glutamyl-tRNA synthetase OS=Acaryochloris ma... 29 9.8
sp|Q923B1|DBR1_MOUSE Lariat debranching enzyme OS=Mus musculus G... 29 9.8

>sp|Q9ZPY2|LAC6_ARATH Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2
SV=1
Length = 569

Score = 35.0 bits (79), Expect = 0.18
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = +1

Query: 100 NINHISPQVSFLQGSSKPVHQVLNSDWPLAYNREYYHSNGCHHDIPSPTRAAMPGXXXXX 279
NI+ I P+VS L+ K + D+P + Y NG +DI + T+AA
Sbjct: 392 NISFIEPKVSILEAYYKQLEGYFTLDFPTTPEKAYDFVNGAPNDIANDTQAANGTRAIVF 451

Query: 280 XXXXRM*AVEERTNTADEEVKTCRTH 357
R+ + + T T E H
Sbjct: 452 EYGSRIQIIFQNTGTLTTENHPIHLH 477


>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2
Length = 34350

Score = 29.3 bits (64), Expect = 9.8
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Frame = +2

Query: 236 LLPQGLPCPGQAVATKI----RRECKP*KREPIPLMKRSKHAAHTP---------KNHLV 376
LLP+ P P + V K R E + K EP L K K A P + V
Sbjct: 11862 LLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPPPPKPVEEVEVPTV 11921

Query: 377 ATHRKALPLPSSVCKIVPVCCLPSPNP 457
+ +P P+ V +I P LP+P P
Sbjct: 11922 TKRERKIPEPTKVPEIKPAIPLPAPEP 11948


>sp|B0C8D6|SYE_ACAM1 Glutamyl-tRNA synthetase OS=Acaryochloris
marina (strain MBIC 11017) GN=gltX PE=3 SV=1
Length = 485

Score = 29.3 bits (64), Expect = 9.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1

Query: 442 QTTYWDDLTHT*RQWQGFPVGGNQVVLR 359
QT W DL WQG +GG+ VV R
Sbjct: 153 QTITWKDLVRGPMHWQGRDLGGDMVVAR 180


>sp|Q923B1|DBR1_MOUSE Lariat debranching enzyme OS=Mus musculus
GN=Dbr1 PE=2 SV=2
Length = 550

Score = 29.3 bits (64), Expect = 9.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1

Query: 61 HAPTEPWRTSAYLNINHI-SPQVSFLQGSSKPVHQVLNSDWPLAYNREYYH 210
H P+ +S +I H+ + +V L+ +PVH L+ DWP R YH
Sbjct: 136 HFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPVHIFLSHDWP----RNIYH 182


tr_hit_id A7CZ15
Definition tr|A7CZ15|A7CZ15_9BACT Putative uncharacterized protein OS=Opitutaceae bacterium TAV2
Align length 89
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918267|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_E02.
(481 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7CZ15|A7CZ15_9BACT Putative uncharacterized protein OS=Opitu... 35 1.4
tr|B6QRE7|B6QRE7_PENMA Meiotic recombination protein Ski8/Rec14,... 33 9.2

>tr|A7CZ15|A7CZ15_9BACT Putative uncharacterized protein
OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_0027 PE=4
SV=1
Length = 452

Score = 35.4 bits (80), Expect = 1.4
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = +2

Query: 197 ENTTTQMGATMTYL--LPQGLPCPGQAVATKIRRECKP*KREPIPLMKRSKHAAHTPKNH 370
+ TT A +T L +P P PGQA + C P K R A +PKN
Sbjct: 368 QKTTWLHAALLTALCSVPPSSPTPGQAASPP----CAPSKNALPSSNTRGTPAPASPKNS 423

Query: 371 LVATHRKALPLPSSVCKIVPVCCLPSPNP 457
A + P P S CK P P+ P
Sbjct: 424 PPANKPTSKPPPPSTCKNAPATSSPASAP 452


>tr|B6QRE7|B6QRE7_PENMA Meiotic recombination protein Ski8/Rec14,
putative OS=Penicillium marneffei ATCC 18224
GN=PMAA_046140 PE=4 SV=1
Length = 309

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1

Query: 124 VSFLQGSSKPVHQVLNSDWPLAYNREYYHSNGCHHDIPS 240
+S S+ +H ++D+PLA E H GCHH + S
Sbjct: 30 ISASGASALKIHSTADTDFPLAQTIEAAHKIGCHHVVTS 68