BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918275|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_E11.
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P47741|TNR4_MOUSE Tumor necrosis factor receptor superfamily ...    36   0.12 
sp|P15725|TNR4_RAT Tumor necrosis factor receptor superfamily me...    34   0.45 
sp|P51816|AFF2_HUMAN AF4/FMR2 family member 2 OS=Homo sapiens GN...    30   8.5  
sp|Q8NEB7|ACRBP_HUMAN Acrosin-binding protein OS=Homo sapiens GN...    30   8.5  

>sp|P47741|TNR4_MOUSE Tumor necrosis factor receptor superfamily
           member 4 OS=Mus musculus GN=Tnfrsf4 PE=1 SV=1
          Length = 272

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 325 CWEARRCTSERGSEHGSHCRP*RRNVPCCKVHTRPARKSGRESGADC 465
           C +  +C    GSE   +C P +  V  C+  T+P + SG + G DC
Sbjct: 77  CKQCTQCNHRSGSELKQNCTPTQDTVCRCRPGTQPRQDSGYKLGVDC 123


>sp|P15725|TNR4_RAT Tumor necrosis factor receptor superfamily
           member 4 OS=Rattus norvegicus GN=Tnfrsf4 PE=1 SV=1
          Length = 271

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 325 CWEARRCTSERGSEHGSHCRP*RRNVPCCKVHTRPARKSGRESGADC 465
           C +  +C    GSE   +C P    V  C+  T+P + S  + G DC
Sbjct: 76  CKQCTQCNHRSGSELKQNCTPTEDTVCQCRPGTQPRQDSSHKLGVDC 122


>sp|P51816|AFF2_HUMAN AF4/FMR2 family member 2 OS=Homo sapiens
           GN=AFF2 PE=1 SV=4
          Length = 1311

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -1

Query: 468 FTISATLSPTLPRWP-CVHFAARDISPSWPT-MTSMF*SPFARTST-SFPTQ 322
           FTI  T   +LP  P CV    R+++ SWPT +TSM  +  +  ST S P Q
Sbjct: 340 FTILQTSEVSLPSDPSCVEEILREMTHSWPTPLTSMHTAGHSEQSTFSIPGQ 391


>sp|Q8NEB7|ACRBP_HUMAN Acrosin-binding protein OS=Homo sapiens
           GN=ACRBP PE=2 SV=1
          Length = 543

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 333 FPTQNCRRTLSRHPKSLSFSMP*SLFRNRNRNLSQ 229
           FPT+ C     ++P   SF     L RNRNR +S+
Sbjct: 472 FPTKICDTDYIQYPNYCSFKSQQCLMRNRNRKVSR 506

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918275|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_E11.
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1ASL3|B1ASL3_MOUSE Tumor necrosis factor receptor superfamil...    36   1.3  
tr|A7APV4|A7APV4_BABBO Membrane protein, putative OS=Babesia bov...    34   4.8  
tr|B2AXI9|B2AXI9_PODAN Predicted CDS Pa_7_10720 OS=Podospora ans...    33   8.0  

>tr|B1ASL3|B1ASL3_MOUSE Tumor necrosis factor receptor superfamily,
           member 4 OS=Mus musculus GN=Tnfrsf4 PE=2 SV=1
          Length = 272

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 325 CWEARRCTSERGSEHGSHCRP*RRNVPCCKVHTRPARKSGRESGADC 465
           C +  +C    GSE   +C P +  V  C+  T+P + SG + G DC
Sbjct: 77  CKQCTQCNHRSGSELKQNCTPTQDTVCRCRPGTQPRQDSGYKLGVDC 123


>tr|A7APV4|A7APV4_BABBO Membrane protein, putative OS=Babesia bovis
           GN=BBOV_III010320 PE=4 SV=1
          Length = 713

 Score = 33.9 bits (76), Expect = 4.8
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = -1

Query: 486 NEFKHSFTISATLSPT-LPRWPCVHFA-ARDISPSWPTMTSMF*SPFARTSTSFPTQNCR 313
           ++FK     + T  P  L  W   H +   +I+   PTMTS F     + ST   T+N  
Sbjct: 240 DKFKTLSMFTVTEPPKKLDAWQYQHMSKVAEIALGLPTMTSQFLKNVLQCSTDEKTKNIA 299

Query: 312 RTLSRHPKSLSFSMP*SLFRNRNRNLSQNKNPNLFS 205
             LS+H K+L      +   +RN    Q KN   F+
Sbjct: 300 SFLSKHAKNLQVKYYTAAITSRN---GQRKNEISFA 332


>tr|B2AXI9|B2AXI9_PODAN Predicted CDS Pa_7_10720 OS=Podospora
           anserina PE=4 SV=1
          Length = 560

 Score = 33.1 bits (74), Expect = 8.0
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = -3

Query: 406 TGHFAVMAD----NDFHVLIPFRSYIDELPNTELPAYP 305
           TG++ V+ D    ND+  ++ FR+   ELP T++P  P
Sbjct: 147 TGYYCVITDQFTDNDYEAIVEFRNAYGELPATQIPKLP 184