BP918277
Clone id YMU001_000111_F01
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTCATGGTAAATCAAGGGGTAGTGACTCAGAATGAGTGCTCCACAGCATGTGAAGTACC
ATCAAAAATAGCAATCTGGATGCTCACTAGTTTTATTTGGTAATAGTGTCAATAGTATAC
AGGAATTTGCACATATTGGGGATCATTTAAATCATATCCACTGCAATGTCTGCCCCAACA
TATGCACAGCGACATCTCCCAAATTTGCCACAACATTGGGTTATGTGTCATTCATTGCAC
CTTGCAACTGTTTTCTAACAATCTTTAAGCAATTGATGATTTTGTGCACAAGATAGGGTA
TTTCATGCGGGCGTAGGCTTCAAAGGACGATGCTTAATTGGATGGTTTCACGCACCTACA
TCCTGTATTGTGCATTTGAGTAGTCTTCCTTGTCCCATCCTCTGCAAGGCTCTGCTTCTC
TCTTCTAGTTTGATATGCACTATGAAGGGCCCAAGCAAGAAAATGATCACATGCGCCATC
ATCATGCTTGCTCTTTCAGAAACAATACTGTAACCATATTCTTGCCCATAGGAGCAGCTA
GAGAATGTAGCTCAGCTCATCTATGTCAGTCTTCATGTTTCCTC
■■Homology search results ■■ -
sp_hit_id Q9ES45
Definition sp|Q9ES45|DUOX2_RAT Dual oxidase 2 OS=Rattus norvegicus
Align length 64
Score (bit) 31.6
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918277|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_F01.
(584 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ES45|DUOX2_RAT Dual oxidase 2 OS=Rattus norvegicus GN=Duox2... 32 3.0
sp|Q9MZF4|DUOX1_CANFA Dual oxidase 1 OS=Canis familiaris GN=DUOX... 32 3.0
sp|P77883|PYRB_LACPL Aspartate carbamoyltransferase OS=Lactobaci... 31 5.2
sp|Q8CIY2|DUOX1_RAT Dual oxidase 1 OS=Rattus norvegicus GN=Duox1... 31 5.2
sp|Q15619|OR1C1_HUMAN Olfactory receptor 1C1 OS=Homo sapiens GN=... 30 6.7
sp|Q8NGR2|OR1L6_HUMAN Olfactory receptor 1L6 OS=Homo sapiens GN=... 30 8.8
sp|Q8HZK3|DUOX1_PIG Dual oxidase 1 OS=Sus scrofa GN=DUOX1 PE=2 SV=1 30 8.8

>sp|Q9ES45|DUOX2_RAT Dual oxidase 2 OS=Rattus norvegicus GN=Duox2 PE=2
SV=1
Length = 1517

Score = 31.6 bits (70), Expect = 3.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -2

Query: 187 VHMLGQTLQWI*FK*SPICANSCILLTLLPNKTSEHPDCYF*WYFT----CCGALILSHY 20
VH LG + F SP+ +C+ ++ N S+ P Y+ W+F G L+L
Sbjct: 1109 VHSLGHAVNVYIFSVSPLSLMTCVFPSVFVNDGSKLPPKYYWWFFETVPGMTGVLLLLVL 1168

Query: 19 PLIY 8
++Y
Sbjct: 1169 AIMY 1172


>sp|Q9MZF4|DUOX1_CANFA Dual oxidase 1 OS=Canis familiaris GN=DUOX1
PE=1 SV=1
Length = 1551

Score = 31.6 bits (70), Expect = 3.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2

Query: 187 VHMLGQTLQWI*FK*SPICANSCILLTLLPNKTSEHPDCYF*WYF 53
+H G + F SP+ SC+ L N SE P Y+ W+F
Sbjct: 1143 LHSAGHVVNVYLFSISPLSVLSCLFPGLFHNDGSEFPQKYYWWFF 1187


>sp|P77883|PYRB_LACPL Aspartate carbamoyltransferase
OS=Lactobacillus plantarum GN=pyrB PE=3 SV=1
Length = 311

Score = 30.8 bits (68), Expect = 5.2
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = -1

Query: 572 RLT*MS*ATFSSCSYGQEYGYSIVSERASMMMAHVIIFLLGPFIVHIKLEE------RSR 411
RL+ ++ TF + +Y Q+YG + +ERA+ M H II P ++L +SR
Sbjct: 221 RLSQVNNQTFDASAYHQQYG--LTAERAARMPKHAIIMHPAPVNRGVELASDLVEAPQSR 278

Query: 410 ALQRMGQG 387
Q+M G
Sbjct: 279 IFQQMTNG 286


>sp|Q8CIY2|DUOX1_RAT Dual oxidase 1 OS=Rattus norvegicus GN=Duox1 PE=1
SV=1
Length = 1551

Score = 30.8 bits (68), Expect = 5.2
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -2

Query: 187 VHMLGQTLQWI*FK*SPICANSCILLTLLPNKTSEHPDCYF*WYFT----CCGALILSHY 20
+H G + F SP+ SC+ L + SE P Y+ W+F G L+L
Sbjct: 1143 LHSAGHVVNVYLFSISPLSVLSCLFPDLFHDDGSEFPQKYYWWFFQTVPGLTGVLLLLAL 1202

Query: 19 PLIY 8
++Y
Sbjct: 1203 AIMY 1206


>sp|Q15619|OR1C1_HUMAN Olfactory receptor 1C1 OS=Homo sapiens
GN=OR1C1 PE=1 SV=4
Length = 314

Score = 30.4 bits (67), Expect = 6.7
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1

Query: 500 SERASMMMAHVIIFLLGPFIVHIKLEERSRALQRMGQGRLLKCTI 366
S+ S +M ++ +L PFI ++ + R LQ+M LLKCT+
Sbjct: 270 SDTLSTIMYSMVAPMLNPFIYTLRNRDMKRGLQKM----LLKCTV 310


>sp|Q8NGR2|OR1L6_HUMAN Olfactory receptor 1L6 OS=Homo sapiens
GN=OR1L6 PE=2 SV=1
Length = 311

Score = 30.0 bits (66), Expect = 8.8
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -1

Query: 512 YSIVSERASMMMAHVIIFLLGPFIVHIKLEERSRALQRM 396
YS+V +R + +M V+ +L PFI ++ ++ R L+++
Sbjct: 267 YSVVRDRVATVMYTVVTPMLNPFIYSLRNKDMKRGLKKL 305


>sp|Q8HZK3|DUOX1_PIG Dual oxidase 1 OS=Sus scrofa GN=DUOX1 PE=2 SV=1
Length = 1553

Score = 30.0 bits (66), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2

Query: 187 VHMLGQTLQWI*FK*SPICANSCILLTLLPNKTSEHPDCYF*WYF 53
+H G + F SP+ SC+ L + SE P Y+ W+F
Sbjct: 1145 LHSAGHVVNVYLFSISPLSVLSCLFPGLFHDNGSEFPQKYYWWFF 1189


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918277|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_F01.
(584 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******