BP918278
Clone id YMU001_000111_F02
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACCAATCTTCATCAACTCCTCTTTCTCAATGGCTTCACCCATATTAATCCCTTTTTCAT
ACAAAGGTTTAAATTTAGGTGGGGTAGTCTTCTTTGGAACTATATGCATCCTAACCTTCT
TCTTTGTTTGCTTAATCACAATTGTATATGCACCAATATTTTCTCACTTTATCGTCCCTT
AGCCATGTCCTTCCCAAAATTATTGGGTAAGAACATGTTGACTCTTCCAACTTCAAGGCA
ACAAAATTGACCACAAAAGCTAGTCCTGCTACACTTATAGTTTGATGTCTGAGAATACCC
AAAGGTTATACTCTTTTTTGGTCAGCCATTTTGACTTGAAAAGGTGTTGGTTCCCATTTC
TTGAGATTCAACTTCTTACAAATAGGAAGAATGTTCACAGTTGAACCTCCATTTACCAGT
AAAACTGACAGGTAAACCTTCCCAATGGAAATATAGACAATAGTATACATCCATTGGAAC
TGCATCT
■■Homology search results ■■ -
sp_hit_id Q5QWY4
Definition sp|Q5QWY4|MLTF_IDILO Membrane-bound lytic murein transglycosylase F OS=Idiomarina loihiensis
Align length 73
Score (bit) 31.6
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918278|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_F02.
(487 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5QWY4|MLTF_IDILO Membrane-bound lytic murein transglycosylas... 32 2.0
sp|Q09966|YS97_CAEEL Putative G-protein coupled receptor B0244.7... 31 3.4
sp|P0AGM7|URAA_ECOLI Uracil permease OS=Escherichia coli (strain... 30 4.4
sp|P0AGM8|URAA_ECO57 Uracil permease OS=Escherichia coli O157:H7... 30 4.4
sp|Q9HGQ3|YLH3_SCHPO Uncharacterized transporter C17D4.03c OS=Sc... 30 5.7

>sp|Q5QWY4|MLTF_IDILO Membrane-bound lytic murein transglycosylase F
OS=Idiomarina loihiensis GN=mltF PE=3 SV=1
Length = 455

Score = 31.6 bits (70), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2

Query: 20 LFLNGFTHINPFFIQRFKFRWGSLLWNYMHPXXXXXXXXXXXXXTNIFSLYRPLAMSFPK 199
LF+ + P +I+ FK GSL W + SL+ P A+S
Sbjct: 274 LFIEAVEQVLPGYIETFKEHSGSLDWRLLAAISYQE------------SLWNPRAVSPTG 321

Query: 200 LLGKNMLTLPTSR 238
+ G MLTLPT++
Sbjct: 322 VRGMMMLTLPTAK 334


>sp|Q09966|YS97_CAEEL Putative G-protein coupled receptor B0244.7
OS=Caenorhabditis elegans GN=B0244.7 PE=3 SV=2
Length = 319

Score = 30.8 bits (68), Expect = 3.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3

Query: 51 PFSYKGLNLGG-VVFFGTICILTFFFVCLITIVYAPI 158
PFS N G V+ FG +CI T F +CL+ +Y I
Sbjct: 196 PFSCDYGNCAGPVLIFGIVCIATAFSICLVIQLYVII 232


>sp|P0AGM7|URAA_ECOLI Uracil permease OS=Escherichia coli (strain
K12) GN=uraA PE=3 SV=1
Length = 429

Score = 30.4 bits (67), Expect = 4.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3

Query: 3 PIFINSSFSMASPI--LIPFSYKGLNLGGVVFFGTICILTFFFV 128
P ++ SSF+ SP+ L+P Y+ + LGG + G + L F V
Sbjct: 66 PAYLGSSFAFISPVLLLLPLGYE-VALGGFIMCGVLFCLVSFIV 108


>sp|P0AGM8|URAA_ECO57 Uracil permease OS=Escherichia coli O157:H7
GN=uraA PE=3 SV=1
Length = 429

Score = 30.4 bits (67), Expect = 4.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3

Query: 3 PIFINSSFSMASPI--LIPFSYKGLNLGGVVFFGTICILTFFFV 128
P ++ SSF+ SP+ L+P Y+ + LGG + G + L F V
Sbjct: 66 PAYLGSSFAFISPVLLLLPLGYE-VALGGFIMCGVLFCLVSFIV 108


>sp|Q9HGQ3|YLH3_SCHPO Uncharacterized transporter C17D4.03c
OS=Schizosaccharomyces pombe GN=SPAC17D4.03c PE=2 SV=1
Length = 732

Score = 30.0 bits (66), Expect = 5.7
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = -3

Query: 464 TIVYISIGKVYLSVLLVNGGSTVNILPICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
++V+I++G L L T +L + KL + +PTPF + A+ K
Sbjct: 117 SMVFITLGAFVLGTL-----DTTCLLLLAFKLFFIRNDPTPFNARSANLKNY-------- 163

Query: 284 QTISVAGLAFVVNFVALKLEESTCSYPI 201
I+ FV+N + + L CSY +
Sbjct: 164 --IAFPICLFVINHILILLGYFQCSYSV 189


tr_hit_id A5B213
Definition tr|A5B213|A5B213_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 113
Score (bit) 60.8
E-value 3.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918278|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_F02.
(487 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5B213|A5B213_VITVI Putative uncharacterized protein OS=Vitis... 61 3e-08
tr|A5C4B4|A5C4B4_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5AKD6|A5AKD6_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5BI15|A5BI15_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05
tr|A5ADR1|A5ADR1_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05
tr|A5BNE4|A5BNE4_VITVI Putative uncharacterized protein OS=Vitis... 51 3e-05
tr|A5C4G6|A5C4G6_VITVI Putative uncharacterized protein OS=Vitis... 50 6e-05
tr|A5C468|A5C468_VITVI Putative uncharacterized protein OS=Vitis... 50 6e-05
tr|A5BWM0|A5BWM0_VITVI Putative uncharacterized protein OS=Vitis... 50 6e-05
tr|A7QVG1|A7QVG1_VITVI Chromosome undetermined scaffold_188, who... 50 7e-05
tr|A5C6K4|A5C6K4_VITVI Putative uncharacterized protein OS=Vitis... 49 9e-05
tr|A5AZT3|A5AZT3_VITVI Putative uncharacterized protein OS=Vitis... 49 9e-05
tr|A5AFC7|A5AFC7_VITVI Putative uncharacterized protein OS=Vitis... 49 9e-05
tr|Q9SKS0|Q9SKS0_ARATH Putative Athila retroelement ORF1 protein... 49 1e-04
tr|A7PBW0|A7PBW0_VITVI Chromosome chr2 scaffold_11, whole genome... 49 1e-04
tr|A5C3F3|A5C3F3_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04
tr|A7QTX3|A7QTX3_VITVI Chromosome undetermined scaffold_172, who... 49 2e-04
tr|A5C341|A5C341_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04
tr|A5BTI5|A5BTI5_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04
tr|A5ACX9|A5ACX9_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04
tr|A5CAU8|A5CAU8_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5C692|A5C692_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5C1P8|A5C1P8_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5C0G4|A5C0G4_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5BMP4|A5BMP4_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5BJV3|A5BJV3_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5B656|A5B656_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5B5J8|A5B5J8_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5AWB6|A5AWB6_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|A5ASL2|A5ASL2_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04

>tr|A5B213|A5B213_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_020876 PE=4 SV=1
Length = 1197

Score = 60.8 bits (146), Expect = 3e-08
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Frame = -3

Query: 461 IVYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILR 288
I+ +SIG Y+ L++ G+ VN+LP + K+L L++ +PT + +AD+ P G++
Sbjct: 172 IILVSIGGTYVEKALLDLGANVNLLPYSVYKQLGLRELKPTSITLSLADRSVKIPRGVIE 231

Query: 287 HQTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWLRDDKVRKYWCIYNC 138
+ V ++V+FV L ++ + T S PIILGR +L V I NC
Sbjct: 232 DVLVQVDKFYYLVDFVVLDMDPIVKGTNSVPIILGRPFLATSNV-----IINC 279


>tr|A5C4B4|A5C4B4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_010413 PE=4 SV=1
Length = 1050

Score = 52.4 bits (124), Expect = 1e-05
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = -3

Query: 467 YTIVYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGI 294
Y + +SIG + L++ G++VN+LP + K+L L + +PT + + D+ P GI
Sbjct: 38 YPTISVSIGGTCVEKALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLTDRSVKIPRGI 97

Query: 293 LRHQTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWL 180
+ H + V + V+FV L + + T PIILGR +L
Sbjct: 98 IEHVLVQVDKFYYPVDFVVLDTDPIFKGTNYVPIILGRPFL 138


>tr|A5AKD6|A5AKD6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003590 PE=4 SV=1
Length = 979

Score = 52.4 bits (124), Expect = 1e-05
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Frame = -3

Query: 458 VYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
+ ++IG Y+ L++ G++VN+LP + KKL L++ +PT + +A++ P G++ H
Sbjct: 130 ISVNIGDTYIEKTLLDLGASVNLLPYSVYKKLGLRELKPTSITLSLANRSINIPRGMIEH 189

Query: 284 QTISVAGLAFVVNFVALKLEESTCS---YPIILGRTWL 180
+ V ++++F+ L E PII GR +L
Sbjct: 190 VLVQVDKFYYLIDFIILDTEPIASGPNHVPIIFGRPFL 227


>tr|A5BI15|A5BI15_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_022917 PE=4 SV=1
Length = 339

Score = 51.6 bits (122), Expect = 2e-05
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Frame = -3

Query: 458 VYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
+ ++IG ++ L++ G++VN+LP + K+L L + + T + +AD+ P GI+
Sbjct: 84 ISVNIGNTFVKRALLDLGASVNLLPYSVYKQLGLGELKSTSITLSLADRSVKFPRGIIED 143

Query: 284 QTISVAGLAFVVNFVALKLEESTCS---YPIILGRTWL 180
I + ++V+FV L E+ T PIILGR +L
Sbjct: 144 VLIQIDNFYYLVDFVVLDTEQGTSGLNHVPIILGRPFL 181


>tr|A5ADR1|A5ADR1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_041344 PE=4 SV=1
Length = 1480

Score = 51.6 bits (122), Expect = 2e-05
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Frame = -3

Query: 458 VYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
+ I IG+ + L++ G++VN+LP I K+L L + +PT + +AD+ P GI++
Sbjct: 54 ISIIIGRTVVEKTLLDLGASVNLLPYFIYKQLGLGELKPTSITLSLADRSVKIPRGIIKD 113

Query: 284 QTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWLRDDKVRKYWCIYNC 138
+ V + V+FV L + + T PIILGR +L V I NC
Sbjct: 114 VLVQVDNFYYPVDFVILDTDPIVKETDYVPIILGRPFLATSNV-----IINC 160


>tr|A5BNE4|A5BNE4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028330 PE=4 SV=1
Length = 1741

Score = 50.8 bits (120), Expect = 3e-05
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Frame = -3

Query: 464 TIVYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGIL 291
TI + GKV LL N G++VN+LP I K+L L + +PT + +AD+ P G++
Sbjct: 567 TISVMIRGKVVEKALL-NLGASVNLLPYSIYKQLGLGELKPTSITLSLADRSVKIPRGVI 625

Query: 290 RHQTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWLRDDKVRKYWCIYNC 138
+ V + V+FV L + + S PIILGR++L V I NC
Sbjct: 626 EDVLVQVDNFYYPVDFVVLDTDPTVKEANSVPIILGRSFLATSNV-----IINC 674


>tr|A5C4G6|A5C4G6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031909 PE=4 SV=1
Length = 588

Score = 50.1 bits (118), Expect = 6e-05
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = -3

Query: 467 YTIVYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGI 294
Y + + IG + L++ G++VN+LP + K+L L + +PT + +AD+ P GI
Sbjct: 468 YATILVMIGGTIVKKALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSVKIPRGI 527

Query: 293 LRHQTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWL 180
+ + V + ++FV L + + T PIILGR +L
Sbjct: 528 IEDVLVQVDNFYYPIDFVVLDTDPIFKETNYVPIILGRPFL 568


>tr|A5C468|A5C468_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_023387 PE=4 SV=1
Length = 1947

Score = 50.1 bits (118), Expect = 6e-05
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Frame = -3

Query: 458 VYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
+ + IG + L++ G++VN+LP + K+L L + +PT + +AD+ P GI+
Sbjct: 581 ISVMIGGTVVKKALLDLGTSVNLLPYSVYKQLGLSELKPTSITLSLADRSMKIPRGIIED 640

Query: 284 QTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWL 180
+ V + V+FV L + + T PIILGR++L
Sbjct: 641 VLVQVDNFYYPVDFVVLDTDPIVKETNYVPIILGRSFL 678


>tr|A5BWM0|A5BWM0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015074 PE=4 SV=1
Length = 1244

Score = 50.1 bits (118), Expect = 6e-05
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Frame = -3

Query: 458 VYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
+ + IG + L++ G++VN+LP + K+L L +PT + +AD+ P GI+
Sbjct: 498 ISVMIGGKVVEKALLDLGASVNLLPYSVYKQLGLGDLKPTSITLSLADRSMKIPRGIIED 557

Query: 284 QTISVAGLAFVVNFVALKLE---ESTCSYPIILGRTWL 180
+ V + VNFV L + + T + PIILGR +L
Sbjct: 558 VLVQVDNFYYPVNFVVLDTDPMVKETNNVPIILGRPFL 595


>tr|A7QVG1|A7QVG1_VITVI Chromosome undetermined scaffold_188, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00007333001 PE=4 SV=1
Length = 161

Score = 49.7 bits (117), Expect = 7e-05
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = -3

Query: 458 VYISIGKVYLSVLLVNGGSTVNILP--ICKKLNLKKWEPTPFQVKMADQKRV*PLGILRH 285
+ ++IG+ ++ L++ G +VN+LP + K+L L++ +PT + +AD+ P G++
Sbjct: 45 ISVNIGETHVEKALLDLGPSVNLLPYSVYKQLGLRELKPTAISLSLADRSVKIPRGVIED 104

Query: 284 QTISVAGLAFVVNFVALKLEEST--CSY-PIILGRTWL 180
+ V + V+FV L + + +Y PIILGR +L
Sbjct: 105 VLVQVDKFYYPVDFVVLDTDPTVKEANYVPIILGRPFL 142