BP918280
Clone id YMU001_000111_F04
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGGTGGGAAATGAGCCATGTTAGTCTTCGGGAGCCTCCATTAAAGGCAAACAAAAAAAA
AGGCAAAAGATGAAGCTGTGGATATGCCTAACTTTTAACATACTCTGAATGCAATGGCCA
CATTCGATGACCCAGATCACCTTCAATCAATGCTTTCGTGATTCTTGGGCATCGTTGACA
AAAATTGCACCTTTAAATCTTGTCCTTGTAAGTCTGCTTTTCTCATGAGGAAGCTGGTTT
ACTTTACAGACCTTAGTCATGCTAGTGCCATCCATGGGGGGCAATATAAACTGACTTTAG
TCATGTACACTTTGAAAATAGGAAAATGGGTTTGGCTTCTGAGTTATATGAGCTTAAATT
TGAAGCCATGCAAAAAAAGGCTACGTGTTCAAGTCTCACAGCGGACATAAATGAGAGTGC
AAGGGGTAGAGAGTCCTTCAGGGCATAGTGTAGGAGGAAGTTATAATTCCAAAAAGGGAC
TGAATGTCTGCCGAAATCGGTTTGGCTT
■■Homology search results ■■ -
sp_hit_id P07477
Definition sp|P07477|TRY1_HUMAN Trypsin-1 OS=Homo sapiens
Align length 54
Score (bit) 32.0
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918280|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_F04.
(508 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P07477|TRY1_HUMAN Trypsin-1 OS=Homo sapiens GN=PRSS1 PE=1 SV=1 32 1.7
sp|P35032|TRY2_SALSA Trypsin-2 (Fragment) OS=Salmo salar PE=2 SV=1 31 2.9
sp|P00763|TRY2_RAT Anionic trypsin-2 OS=Rattus norvegicus GN=Prs... 31 2.9
sp|P07478|TRY2_HUMAN Trypsin-2 OS=Homo sapiens GN=PRSS2 PE=1 SV=1 31 2.9
sp|P00761|TRYP_PIG Trypsin OS=Sus scrofa PE=1 SV=1 30 4.9
sp|P08426|TRY3_RAT Cationic trypsin-3 OS=Rattus norvegicus GN=Tr... 30 8.4
sp|Q13SH4|OXAA_BURXL Inner membrane protein oxaA OS=Burkholderia... 30 8.4

>sp|P07477|TRY1_HUMAN Trypsin-1 OS=Homo sapiens GN=PRSS1 PE=1 SV=1
Length = 247

Score = 32.0 bits (71), Expect = 1.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3

Query: 248 CKVNQLPHEKSRLTRTRFKGAIFVNDAQESRKH*LKVIWVIECGHCIQSMLKVR 87
C+ N +P++ S + F G +N+ WV+ GHC +S ++VR
Sbjct: 30 CEENSVPYQVSLNSGYHFCGGSLINEQ-----------WVVSAGHCYKSRIQVR 72


>sp|P35032|TRY2_SALSA Trypsin-2 (Fragment) OS=Salmo salar PE=2 SV=1
Length = 231

Score = 31.2 bits (69), Expect = 2.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3

Query: 248 CKVNQLPHEKSRLTRTRFKGAIFVNDAQESRKH*LKVIWVIECGHCIQSMLKVR 87
CK PH+ S + F G VN+ WV+ HC QS ++VR
Sbjct: 16 CKAYSQPHQVSLNSGYHFCGGSLVNEN-----------WVVSAAHCYQSRVEVR 58


>sp|P00763|TRY2_RAT Anionic trypsin-2 OS=Rattus norvegicus GN=Prss2
PE=1 SV=2
Length = 246

Score = 31.2 bits (69), Expect = 2.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3

Query: 248 CKVNQLPHEKSRLTRTRFKGAIFVNDAQESRKH*LKVIWVIECGHCIQSMLKVR 87
C+ N +P++ S + F G +ND WV+ HC +S ++VR
Sbjct: 30 CQENSVPYQVSLNSGYHFCGGSLINDQ-----------WVVSAAHCYKSRIQVR 72


>sp|P07478|TRY2_HUMAN Trypsin-2 OS=Homo sapiens GN=PRSS2 PE=1 SV=1
Length = 247

Score = 31.2 bits (69), Expect = 2.9
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3

Query: 251 VCKVNQLPHEKSRLTRTRFKGAIFVNDAQESRKH*LKVIWVIECGHCIQSMLKVR 87
+C+ N +P++ S + F G +++ WV+ GHC +S ++VR
Sbjct: 29 ICEENSVPYQVSLNSGYHFCGGSLISEQ-----------WVVSAGHCYKSRIQVR 72


>sp|P00761|TRYP_PIG Trypsin OS=Sus scrofa PE=1 SV=1
Length = 231

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -3

Query: 248 CKVNQLPHEKSRLTRTRFKGAIFVNDAQESRKH*LKVIWVIECGHCIQSMLKVR 87
C N +P++ S + + F G +N WV+ HC +S ++VR
Sbjct: 15 CAANSIPYQVSLNSGSHFCGGSLINSQ-----------WVVSAAHCYKSRIQVR 57


>sp|P08426|TRY3_RAT Cationic trypsin-3 OS=Rattus norvegicus GN=Try3
PE=2 SV=1
Length = 247

Score = 29.6 bits (65), Expect = 8.4
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3

Query: 248 CKVNQLPHEKSRLTRTRFKGAIFVNDAQESRKH*LKVIWVIECGHCIQSMLKVR 87
C+ N LP++ S F G +N WV+ HC +S ++VR
Sbjct: 31 CQKNSLPYQVSLNAGYHFCGGSLINSQ-----------WVVSAAHCYKSRIQVR 73


>sp|Q13SH4|OXAA_BURXL Inner membrane protein oxaA OS=Burkholderia
xenovorans (strain LB400) GN=oxaA PE=3 SV=1
Length = 552

Score = 29.6 bits (65), Expect = 8.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3

Query: 69 DEAVDMPNF*HTLNAMATFDDPDHLQSMLS*FLGIVDKN 185
D+ V+ P F HT A + D H Q M G +DKN
Sbjct: 215 DQPVETPRFSHTFIGPAVYTDQHHFQKMT---FGDIDKN 250


tr_hit_id Q4XXS2
Definition tr|Q4XXS2|Q4XXS2_PLACH Putative uncharacterized protein (Fragment) OS=Plasmodium chabaudi
Align length 50
Score (bit) 35.8
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918280|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_F04.
(508 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4XXS2|Q4XXS2_PLACH Putative uncharacterized protein (Fragmen... 36 1.2

>tr|Q4XXS2|Q4XXS2_PLACH Putative uncharacterized protein (Fragment)
OS=Plasmodium chabaudi GN=PC000926.02.0 PE=4 SV=1
Length = 1040

Score = 35.8 bits (81), Expect = 1.2
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -2

Query: 471 WNYNFLLHYALKDSLPLALSFMSAVRLEHVAFFCMASNLSSYNSEAKPIF 322
W +F LHYA + ++P+ +SF+S + +A NL ++N+E +F
Sbjct: 213 WRNSFDLHYADRKNIPIKISFLSPSTNKVDKVVTIAENLENFNNEQNHLF 262