BP918281 |
Clone id |
YMU001_000111_F05 |
Library |
YMU01 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000111_F05. |
Accession |
BP918281 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGATAGAGAAAAAAGATTAATCAATAAATTAGTCCACTTTTGTATGATTGATGGTAAGAA AACAAAATCTCGTGTTATTGTTTCCCAAACCCTTTCTTGTCTTTTCCGAACTGAACCTGA TGTTCATGTTATTCTACTTTTGGCGTTAGCCACAGAGAATGTCAAGCCTACTTGCGAAGT CAAGAGAGTGAGAATTGCAGGGATTACTCGTAATGTACCCAAGATTATTGCCAAAAAACG TCAAGAAACCTTAGCTCTTCGTTGGATTATGGAAGCAGCTATCAAACAACGTACTACAAG CAGAAATAGCCAGAGTCCAGATCAATGTTTATCTGCTGAGATACTGGATGCTTATCAAAA GAAGGGAAATGTTCATAAGAGAAGGGATGATCTTCATAAACTGGCAGAGGCCAATAGAAG TTTCGCGCATTATAGGTGGTGGTGCAGTAAACAAAGTAAAATAAACAAAAAAAAAACAAA AAATTCCTGCGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P26867 |
Definition |
sp|P26867|RT07_MARPO Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha |
Align length |
146 |
Score (bit) |
176.0 |
E-value |
3.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918281|Adiantum capillus-veneris mRNA, clone: YMU001_000111_F05. (448 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P26867|RT07_MARPO Ribosomal protein S7, mitochondrial OS=Marc... 176 3e-44 sp|Q9MF82|RT07_BETVU Ribosomal protein S7, mitochondrial OS=Beta... 154 2e-37 sp|Q01902|RT07_WHEAT Ribosomal protein S7, mitochondrial OS=Trit... 149 5e-36 sp|P92557|RT07_ARATH Ribosomal protein S7, mitochondrial OS=Arab... 149 7e-36 sp|Q492B0|RS7_BLOPB 30S ribosomal protein S7 OS=Blochmannia penn... 108 8e-24 sp|Q87L44|RS7_VIBPA 30S ribosomal protein S7 OS=Vibrio parahaemo... 108 1e-23 sp|A3Q978|RS7_SHELP 30S ribosomal protein S7 OS=Shewanella loihi... 107 2e-23 sp|A7MZ63|RS7_VIBHB 30S ribosomal protein S7 OS=Vibrio harveyi (... 107 2e-23 sp|Q89A66|RS7_BUCBP 30S ribosomal protein S7 OS=Buchnera aphidic... 107 3e-23 sp|Q9KUZ8|RS7_VIBCH 30S ribosomal protein S7 OS=Vibrio cholerae ... 106 5e-23 sp|A5F3J8|RS7_VIBC3 30S ribosomal protein S7 OS=Vibrio cholerae ... 106 5e-23 sp|A1REB0|RS7_SHESW 30S ribosomal protein S7 OS=Shewanella sp. (... 106 5e-23 sp|A4YBY7|RS7_SHEPC 30S ribosomal protein S7 OS=Shewanella putre... 106 5e-23 sp|Q7N9B3|RS7_PHOLL 30S ribosomal protein S7 OS=Photorhabdus lum... 106 5e-23 sp|A8GYX2|RS7_SHEPA 30S ribosomal protein S7 OS=Shewanella peale... 105 9e-23 sp|B0TM16|RS7_SHEHH 30S ribosomal protein S7 OS=Shewanella halif... 105 9e-23 sp|Q12SW3|RS7_SHEDO 30S ribosomal protein S7 OS=Shewanella denit... 105 9e-23 sp|A9KW98|RS7_SHEB9 30S ribosomal protein S7 OS=Shewanella balti... 105 1e-22 sp|A6WHS4|RS7_SHEB8 30S ribosomal protein S7 OS=Shewanella balti... 105 1e-22 sp|A3DB98|RS7_SHEB5 30S ribosomal protein S7 OS=Shewanella balti... 105 1e-22 sp|A6Q1M6|RS7_NITSB 30S ribosomal protein S7 OS=Nitratiruptor sp... 105 1e-22 sp|Q6KHS4|RS7_MYCMO 30S ribosomal protein S7 OS=Mycoplasma mobil... 105 1e-22 sp|A4WFD4|RS7_ENT38 30S ribosomal protein S7 OS=Enterobacter sp.... 105 1e-22 sp|Q7MH41|RS7_VIBVY 30S ribosomal protein S7 OS=Vibrio vulnificu... 104 2e-22 sp|Q8DCQ9|RS7_VIBVU 30S ribosomal protein S7 OS=Vibrio vulnificu... 104 2e-22 sp|A8G1F2|RS7_SHESH 30S ribosomal protein S7 OS=Shewanella sedim... 104 2e-22 sp|P57594|RS7_BUCAI 30S ribosomal protein S7 OS=Buchnera aphidic... 104 2e-22 sp|Q089Q8|RS7_SHEFN 30S ribosomal protein S7 OS=Shewanella frigi... 104 2e-22 sp|A1S214|RS7_SHEAM 30S ribosomal protein S7 OS=Shewanella amazo... 104 2e-22 sp|Q6CZW4|RS7_ERWCT 30S ribosomal protein S7 OS=Erwinia carotovo... 104 2e-22
>sp|P26867|RT07_MARPO Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2 Length = 230
Score = 176 bits (447), Expect = 3e-44 Identities = 93/146 (63%), Positives = 109/146 (74%) Frame = +2
Query: 5 REKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVK 184 ++K+LI KLVH CMIDGKKT+SR IV +T R P VI LL A ENVKP CEVK Sbjct: 89 KQKQLIKKLVHICMIDGKKTRSRAIVYKTFH---RLAPHGDVIKLLVNAIENVKPICEVK 145
Query: 185 RVRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKK 364 +VRI+G TR VP IIA RQETLA+RW++E+A K+R + S S DQCL AEIL+A QK Sbjct: 146 KVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRR-MGKKSISLDQCLYAEILEASQKM 204
Query: 365 GNVHKRRDDLHKLAEANRSFAHYRWW 442 G K+RDDLHKLAEANRSF+HYRWW Sbjct: 205 GIARKKRDDLHKLAEANRSFSHYRWW 230
>sp|Q9MF82|RT07_BETVU Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2 Length = 148
Score = 154 bits (389), Expect = 2e-37 Identities = 81/145 (55%), Positives = 108/145 (74%) Frame = +2
Query: 8 EKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKR 187 +K+LI KLV+F M +GK+TK R IV QT L RTE DV I L+ A EN+KP C+V++ Sbjct: 8 QKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDV--IKLMIDAVENIKPICKVEK 65
Query: 188 VRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKG 367 VR+AG +VP I+A+ RQ+TLA+RWI+EAA K+R + R S ++CL EILDAY+K+G Sbjct: 66 VRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISL--EKCLFDEILDAYRKRG 123
Query: 368 NVHKRRDDLHKLAEANRSFAHYRWW 442 K+R++LH LA ANRSFAH+RWW Sbjct: 124 ISRKKRENLHGLASANRSFAHFRWW 148
>sp|Q01902|RT07_WHEAT Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1 Length = 148
Score = 149 bits (376), Expect = 5e-36 Identities = 79/145 (54%), Positives = 104/145 (71%) Frame = +2
Query: 8 EKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKR 187 +K LI KLV+F MIDGK+T+ R IV +T L RTE DV I L+ A +N+KP CEV + Sbjct: 8 QKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDV--IKLMVDAVDNIKPICEVVK 65
Query: 188 VRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKG 367 V +AG +VP I+A+ RQ+TLA+RWI+ AA K+R + R S ++C AEILDAY+K+G Sbjct: 66 VGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISL--EKCSFAEILDAYRKRG 123
Query: 368 NVHKRRDDLHKLAEANRSFAHYRWW 442 KRR++LH LA NRSFAH+RWW Sbjct: 124 ISRKRRENLHGLASTNRSFAHFRWW 148
>sp|P92557|RT07_ARATH Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1 Length = 148
Score = 149 bits (375), Expect = 7e-36 Identities = 78/145 (53%), Positives = 104/145 (71%) Frame = +2
Query: 8 EKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKR 187 +K LI KLV+F M +GK+T+ R IV QT RTE DV I L+ A EN+KP CEV + Sbjct: 8 QKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDV--IKLMVDAVENIKPICEVAK 65
Query: 188 VRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKG 367 V +AG +VP I+A+ RQ+TLA+RWI+EAA K+R + R S ++C AEILDAYQK+G Sbjct: 66 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISL--EKCSFAEILDAYQKRG 123
Query: 368 NVHKRRDDLHKLAEANRSFAHYRWW 442 + ++R++LH LA NRSFAH+RWW Sbjct: 124 SARRKRENLHGLASTNRSFAHFRWW 148
>sp|Q492B0|RS7_BLOPB 30S ribosomal protein S7 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rpsG PE=3 SV=1 Length = 156
Score = 108 bits (271), Expect = 8e-24 Identities = 57/141 (40%), Positives = 90/141 (63%) Frame = +2
Query: 17 LINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKRVRI 196 L+ K ++ M++GKK+ + IV L LFR + + + +A NV+P EVK R+ Sbjct: 22 LLAKFINILMLNGKKSTAESIVYSALDSLFRRS-NKNCLEAFEIALNNVRPVVEVKSRRV 80
Query: 197 AGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKGNVH 376 G T VP + R+ TLA+RWI+EAA K RN +S + L++E+LDA + KG+ Sbjct: 81 GGSTYQVPVEVRLVRRNTLAMRWIIEAARK-----RNDKSMELRLASELLDAIEGKGHAV 135
Query: 377 KRRDDLHKLAEANRSFAHYRW 439 K+R+++H++AE+N++FAHYRW Sbjct: 136 KKREEIHRIAESNKAFAHYRW 156
>sp|Q87L44|RS7_VIBPA 30S ribosomal protein S7 OS=Vibrio parahaemolyticus GN=rpsG PE=3 SV=1 Length = 156
Score = 108 bits (270), Expect = 1e-23 Identities = 59/144 (40%), Positives = 86/144 (59%) Frame = +2
Query: 8 EKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKR 187 + L+ K V+ M+DGKK+ + IV L + H + + A ENV+P EVK Sbjct: 19 KSELLAKFVNILMVDGKKSTAEKIVYTALDSMAEKSGKDH-LAIFEEALENVRPAVEVKS 77
Query: 188 VRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKG 367 R+ G T VP + R+ LA+RW++EAA K R +S Q L+AE+LDA + KG Sbjct: 78 RRVGGSTYQVPVEVRPVRRNALAMRWLVEAARK-----RGEKSMAQRLAAEMLDASENKG 132
Query: 368 NVHKRRDDLHKLAEANRSFAHYRW 439 K+R+D+H++AEAN++FAHYRW Sbjct: 133 TAVKKREDVHRMAEANKAFAHYRW 156
>sp|A3Q978|RS7_SHELP 30S ribosomal protein S7 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rpsG PE=3 SV=1 Length = 156
Score = 107 bits (268), Expect = 2e-23 Identities = 57/141 (40%), Positives = 89/141 (63%) Frame = +2
Query: 17 LINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKRVRI 196 L+ K ++ M DGKK+ + I+ + L + + + H+++L A A +NV+PT EVK R+ Sbjct: 22 LLAKFINVIMQDGKKSTAEKIIYKALDVVAEKKGEEHLVILEA-ALDNVRPTVEVKSRRV 80
Query: 197 AGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKGNVH 376 G T VP + R+ LA+RW++EAA K R +S L+ E+LDA + KG Sbjct: 81 GGSTYQVPCEVRPVRRNALAMRWLVEAARK-----RGEKSMALRLAGEMLDAAENKGTAV 135
Query: 377 KRRDDLHKLAEANRSFAHYRW 439 K+R+D+H++AEAN++FAHYRW Sbjct: 136 KKREDVHRMAEANKAFAHYRW 156
>sp|A7MZ63|RS7_VIBHB 30S ribosomal protein S7 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rpsG PE=3 SV=1 Length = 156
Score = 107 bits (267), Expect = 2e-23 Identities = 58/144 (40%), Positives = 86/144 (59%) Frame = +2
Query: 8 EKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKR 187 + L+ K V+ M+DGKK+ + IV L + H + + A ENV+P EVK Sbjct: 19 KSELLAKFVNILMVDGKKSTAEKIVYTALDSMAEKSGKDH-LAIFEEALENVRPAVEVKS 77
Query: 188 VRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKG 367 R+ G T VP + R+ LA+RW++EAA K R +S Q L+AE+LDA + KG Sbjct: 78 RRVGGSTYQVPVEVRPVRRNALAMRWLVEAARK-----RGEKSMAQRLAAEMLDASENKG 132
Query: 368 NVHKRRDDLHKLAEANRSFAHYRW 439 K+R+D+H++A+AN++FAHYRW Sbjct: 133 TAVKKREDVHRMADANKAFAHYRW 156
>sp|Q89A66|RS7_BUCBP 30S ribosomal protein S7 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpsG PE=3 SV=1 Length = 156
Score = 107 bits (266), Expect = 3e-23 Identities = 61/143 (42%), Positives = 91/143 (63%), Gaps = 2/143 (1%) Frame = +2
Query: 17 LINKLVHFCMIDGKKTKSRVIVSQTLSCLFRT--EPDVHVILLLALATENVKPTCEVKRV 190 ++ KL++ M+DGKK+ + IV Q L+ L + +P++ V L LA ENV+PT EVK Sbjct: 22 MVAKLINIIMVDGKKSIAEEIVYQALTMLAKKIGKPELEV---LELALENVRPTVEVKSR 78
Query: 191 RIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKGN 370 R+ G T VP + R+ LA+RWI+ +A K R +S LS E+ DA + KG+ Sbjct: 79 RVGGSTYQVPIEVRPVRRHALAMRWIVHSARK-----RIDKSMIIRLSNELSDAIENKGS 133
Query: 371 VHKRRDDLHKLAEANRSFAHYRW 439 K+R+D+H++AEAN++FAHYRW Sbjct: 134 AVKKREDVHRMAEANKAFAHYRW 156
>sp|Q9KUZ8|RS7_VIBCH 30S ribosomal protein S7 OS=Vibrio cholerae GN=rpsG PE=3 SV=1 Length = 156
Score = 106 bits (264), Expect = 5e-23 Identities = 58/144 (40%), Positives = 86/144 (59%) Frame = +2
Query: 8 EKRLINKLVHFCMIDGKKTKSRVIVSQTLSCLFRTEPDVHVILLLALATENVKPTCEVKR 187 + L+ K V+ M+DGKK+ + IV L + H + + A ENV+P EVK Sbjct: 19 KSELLAKFVNILMVDGKKSTAEKIVYTALDTMAEKSGKDH-LAVFEEALENVRPAVEVKS 77
Query: 188 VRIAGITRNVPKIIAKKRQETLALRWIMEAAIKQRTTSRNSQSPDQCLSAEILDAYQKKG 367 R+ G T VP + R+ LA+RW++EAA K R +S L+AE+LDA + KG Sbjct: 78 RRVGGSTYQVPVEVRPVRRNALAMRWLVEAARK-----RGEKSMAARLAAEMLDAAENKG 132
Query: 368 NVHKRRDDLHKLAEANRSFAHYRW 439 + K+R+D+H++AEAN++FAHYRW Sbjct: 133 SAVKKREDVHRMAEANKAFAHYRW 156
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1XGB2 |
Definition |
tr|Q1XGB2|Q1XGB2_PHYPA 30S ribosomal protein S7 OS=Physcomitrella patens |
Align length |
146 |
Score (bit) |
174.0 |
E-value |
2.0e-42 |
Report |
|