BP918286 |
Clone id |
YMU001_000111_F10 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000111_F10. |
Accession |
BP918286 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGTGTCAGAGACTATTTTGAGATGGTATATAGTCCGCTTTATGGCTATTATTTGCTATT GAGATGGTGCTTATGGGTTGATTAGGAGCACTTTTCGGTATCGAACAGTCTGTCTCCGAG TTTTTCCAGGCATCCATCTTCTCACAGGTTCTTGCATACATACATGACATCCAAATTTCT TACAGGTTGTAGTGTTTTGCATCAGCATAGATTTCAGTGTTAGTATTTGATGCGGATATG CATTGTTTGGGCACTTTTGATAGTGCTTGAGCTCTTTTGAGAGCGGTTTTACTCCCCGCA GGGATTTGTTTACTTCTTGCACATTTTGTTTGGCGCTTGTTTGAGCGCGTATACTACACC TTGCAGTATTGTCGACAGTGGATGTACGTTGAGTTGCGGAAACTGCCATATGTACCTTTT GTAGAGCCGATTTGGCTTGTTTCTAGCACTTCCGACCGTTTCTGAAACTCGGTTCGGAGG CCCTTTCTGAGATTGAGCTGGTTTCTTGTCTGCATAACCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P43236 |
Definition |
sp|P43236|CATK_RABIT Cathepsin K OS=Oryctolagus cuniculus |
Align length |
50 |
Score (bit) |
32.7 |
E-value |
1.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6M965 |
Definition |
tr|A6M965|A6M965_9VIRU Putative O-antigen polymerase OS=Geobacillus virus E2 |
Align length |
59 |
Score (bit) |
36.2 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918286|Adiantum capillus-veneris mRNA, clone: YMU001_000111_F10. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A6M965|A6M965_9VIRU Putative O-antigen polymerase OS=Geobacil... 36 1.00 tr|B6LEE1|B6LEE1_BRAFL Putative uncharacterized protein (Fragmen... 36 1.0 tr|Q8JIG2|Q8JIG2_DANRE BHLH-PAS transcription factor OS=Danio re... 35 1.7 tr|B8IN94|B8IN94_METNO Secretion protein HlyD family protein OS=... 35 1.7 tr|B3DH92|B3DH92_DANRE Clock homolog 3 (Mouse) OS=Danio rerio GN... 35 2.2 tr|B6LED9|B6LED9_BRAFL Putative uncharacterized protein (Fragmen... 35 2.2 tr|Q4Y2F2|Q4Y2F2_PLACH Putative uncharacterized protein OS=Plasm... 34 5.0 tr|B6LEC1|B6LEC1_BRAFL Putative uncharacterized protein (Fragmen... 34 5.0 tr|B4JQJ6|B4JQJ6_DROGR GH13708 OS=Drosophila grimshawi GN=GH1370... 33 6.5 tr|B3DM60|B3DM60_XENTR Rlf protein OS=Xenopus tropicalis GN=rlf ... 33 6.5 tr|B0YV76|B0YV76_9HIV1 Envelope glycoprotein OS=Human immunodefi... 33 8.5 tr|Q54RX7|Q54RX7_DICDI Putative uncharacterized protein OS=Dicty... 33 8.5 tr|Q0Q4G9|Q0Q4G9_PIG Cathepsin K (Fragment) OS=Sus scrofa GN=CTS... 33 8.5
>tr|A6M965|A6M965_9VIRU Putative O-antigen polymerase OS=Geobacillus virus E2 PE=4 SV=1 Length = 496
Score = 36.2 bits (82), Expect = 1.00 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2
Query: 176 FLTGCSVLHQHRFQC*YLMRICIVWALLIVLELF*ERFYSPQGFVYFLHILFGACLSAY 352 +L GC + QH FQ + +C+ AL+I + Y+P V FL +L G CL Y Sbjct: 8 WLGGCILYLQHSFQKVFFCLLCVAVALIIGI----LTAYNPIASVLFLLLLIGVCLFVY 62
>tr|B6LEE1|B6LEE1_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_204802 PE=4 SV=1 Length = 400
Score = 36.2 bits (82), Expect = 1.0 Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 3/137 (2%) Frame = -3
Query: 428 GSTKGT--YGSFRNSTYIHCRQYCKV*YTRSNKRQTKCARSKQIPAGSKTALKRAQALSK 255 GST G YG N +C Y S + C + T ++A + Sbjct: 106 GSTSGDSYYGDVVN-------YHCDPGYEISGDEERTCQSDQTWSGTQPTCNRKACPVLS 158
Query: 254 VPKQCISASNTNTEIYADAKHYNL*EIW-MSCMYARTCEKMDAWKNSETDCSIPKSAPNQ 78 VP + S T +Y D Y+ E + + RTC+ +W ++ +CS P Sbjct: 159 VPN---NGSRTEGHLYGDKVTYSCNEGYELIGSENRTCQANQSWSGTQPNCSRTSCPPLP 215
Query: 77 PISTISIANNSHKADYI 27 P+ S + S+ D + Sbjct: 216 PVEHGSTSGGSYYGDVV 232
>tr|Q8JIG2|Q8JIG2_DANRE BHLH-PAS transcription factor OS=Danio rerio GN=clock3 PE=2 SV=1 Length = 813
Score = 35.4 bits (80), Expect = 1.7 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%) Frame = -1
Query: 502 TSSISERASEPSFRNGRKC*KQAKSALQKVHMAVSATQRTSTVD--NTARCSIRAQTSAK 329 TSS S S + + C S K+HM VS++ R +TVD + R S+ Q+ + Sbjct: 418 TSSRSSHKSSHTAISDNTC----TSTPSKLHMDVSSSPRPATVDMISQRRSSVSTQSMSS 473
Query: 328 QNVQEVNKSLRGVKPLSKELKHYQ-KCPNNAYPHQILTLKSMLMQN 194 QN + + ++ +S++ +H Q + P P+ + + + MQ+ Sbjct: 474 QNTTQTDSPVQ----ISQQTQHQQPQQPQQVQPNALFSAQLNAMQH 515
>tr|B8IN94|B8IN94_METNO Secretion protein HlyD family protein OS=Methylobacterium nodulans ORS 2060 GN=Mnod_7473 PE=4 SV=1 Length = 390
Score = 35.4 bits (80), Expect = 1.7 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = -1
Query: 517 LCRQETSSISERASEPSFRNGRKC*KQAKSALQKVHMAVSATQRTSTVDNTARCSIRA-- 344 L R S ++ ASE F+ K+A +A++K H + A +R V +T +RA Sbjct: 158 LTRYRQLSANQYASEQRFQQAEADHKKAAAAVEKAHATLDAAERQLAVIDTQTRQVRAAR 217
Query: 343 -QTSAKQNVQEVN 308 Q A+Q++ +N Sbjct: 218 EQARAEQDIARLN 230
>tr|B3DH92|B3DH92_DANRE Clock homolog 3 (Mouse) OS=Danio rerio GN=clock3 PE=2 SV=1 Length = 820
Score = 35.0 bits (79), Expect = 2.2 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = -1
Query: 502 TSSISERASEPSFRNGRKC*KQAKSALQKVHMAVSATQRTSTVD--NTARCSIRAQTSAK 329 TSS S S + + C S K+HM VS++ R +TVD + R S+ Q+ + Sbjct: 418 TSSRSSHKSSHTAISDNTC----TSTPSKLHMDVSSSPRPATVDMISQRRSSVSTQSMSS 473
Query: 328 QNVQEVNKSLRGVKPLSKELKHYQKCPNNAYPHQI 224 QN + + ++ +S++ +H Q+ P P Q+ Sbjct: 474 QNTTQTDSPVQ----ISQQTQHQQQQPQQ--PQQV 502
>tr|B6LED9|B6LED9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_204816 PE=4 SV=1 Length = 320
Score = 35.0 bits (79), Expect = 2.2 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 1/115 (0%) Frame = -3
Query: 368 YCKV*YTRSNKRQTKCARSKQIPAGSKTALKRAQALSKVPKQCISASNTNTEIYADAKHY 189 +C Y S + C + T ++A + VP + S T +Y D Y Sbjct: 7 HCDPGYEISGDEERTCQSDQTWSGTQPTCNRKACPVLSVPN---NGSRTEGHLYGDKVTY 63
Query: 188 NL*EIW-MSCMYARTCEKMDAWKNSETDCSIPKSAPNQPISTISIANNSHKADYI 27 + E + + RTC+ +W ++ +CS P P+ S + S+ D + Sbjct: 64 SCNEGYELIGSENRTCQANQSWSGTQPNCSRTSCPPLPPVEHGSTSGGSYYGDVV 118
Score = 34.3 bits (77), Expect = 3.8 Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 1/135 (0%) Frame = -3
Query: 428 GSTKGTYGSFRNSTYIHCRQYCKV*YTRSNKRQTKCARSKQIPAGSKTALKRAQALSKVP 249 GST G GS+ + +C Y S + C + T + A + VP Sbjct: 106 GSTSG--GSYYGDVVTY---HCDPGYEISGDEERTCQSDQTWSGTQPTCSRTACPVLPVP 160
Query: 248 KQCISASNTNTEIYADAKHYNL*EIW-MSCMYARTCEKMDAWKNSETDCSIPKSAPNQPI 72 + S T +Y D ++ E + + RTC+ +W ++ +CS +P P+ Sbjct: 161 N---NGSRTEGHLYGDKVTFSCDEGYELIGSENRTCQANQSWSGTQPNCSRKPCSPLLPV 217
Query: 71 STISIANNSHKADYI 27 S + S+ D + Sbjct: 218 EHGSTSGGSYYGDVV 232
>tr|Q4Y2F2|Q4Y2F2_PLACH Putative uncharacterized protein OS=Plasmodium chabaudi GN=PC000645.01.0 PE=4 SV=1 Length = 629
Score = 33.9 bits (76), Expect = 5.0 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = -3
Query: 497 LNLRKGLRTEFQKRSEVLETSQIGSTKGTYGSFRNSTYIHC 375 +NL+ FQKR+E ++S I S G + SF NS +I C Sbjct: 540 VNLKAKFSLHFQKRTEGYKSSDIHSFAGLFMSFMNSIFILC 580
>tr|B6LEC1|B6LEC1_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_204663 PE=4 SV=1 Length = 432
Score = 33.9 bits (76), Expect = 5.0 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%) Frame = -3
Query: 428 GSTKGTYGSFRNSTYIHCRQYCKV*YTRSNKRQTKCARSKQIPAGSKTALKRAQALSKVP 249 GST G GS+ + +C Y S + C + T + A + VP Sbjct: 173 GSTSG--GSYYGDVVTY---HCDPGYEISGDEERTCQSDQTWSGTQSTCNRTACPILPVP 227
Query: 248 KQCISASNTNTEIYADAKHYNL*EIW-MSCMYARTCEKMDAWKNSETDCSIPKSAPNQPI 72 + S T +Y D ++ E + + RTC+ +W ++ +CS AP + Sbjct: 228 N---NGSRTEGHLYGDKVTFSCNEGYELIGSENRTCQANQSWSGTQPNCSRTSCAPLMAV 284
Query: 71 STISIANNSHKADYI 27 S + S+ D + Sbjct: 285 EHGSTSGGSYYGDVV 299
>tr|B4JQJ6|B4JQJ6_DROGR GH13708 OS=Drosophila grimshawi GN=GH13708 PE=4 SV=1 Length = 1822
Score = 33.5 bits (75), Expect = 6.5 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = -1
Query: 346 AQTSAKQNVQEVNKSLRGVKPLSKELKHYQKCPNNAYPHQIL 221 AQT+ QN +++ KSL + P K++ H P AYPH+++ Sbjct: 198 AQTNGLQNGKKLTKSLSEI-PNGKDMMHQHYPPGFAYPHELI 238
>tr|B3DM60|B3DM60_XENTR Rlf protein OS=Xenopus tropicalis GN=rlf PE=2 SV=1 Length = 1323
Score = 33.5 bits (75), Expect = 6.5 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Frame = -3
Query: 341 NKRQTKCARSKQIPAGSKTALKRAQALSKVPKQC--ISASNTNTEIYADAKHYNL*EIWM 168 N Q C +K +P+ KT + + C + NT E+ KH NL + Sbjct: 494 NTEQLNCV-NKCVPSSDKTGSAEDCGETHLSSVCHRSTCENTINELLTSLKHLNL-KNSN 551
Query: 167 SCMYARTCEKMDAWKNSETDCSIPKSA 87 SC+ + +A +S DC++PK++ Sbjct: 552 SCITTSGAQDSEANASSSIDCAVPKNS 578
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