BP918290
Clone id YMU001_000111_G03
Library
Length 433
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000111_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAAAACAGGTTGTAAATGTTAACAAAAACTTTGTACAGCAGTGGATGCCGCCGCTCAAGC
TGTCAACAGACCCCGCAAATGTTTACAAGACAAGCTTCCAAAGGTTCCCATAATGTACAG
TATTAAAGTATTCGAAAAGAAAACAACTCTCCAAAGCTTGTAGCACTCTGTACAATATCG
ACAAGAAAATTTGCTGTGAGAGAGCTACTGAAGTGGCTCATCCAAATCTGCTCTGCGAGT
AAAGTAAACCATTTTCCCATCTCATTTGAAGTGAGGTGGCAAATTGTACAACCATTCTGT
ACAAGATGCTGCTGAGCAACCTAATACAGAGTGGTTTGAGGAAAATCATGACACCATCAA
ATAACCACACTAAAGAACGAACCAATTAGTCTCCACATTGCACTGCTTGTCATTCAGGAA
ACTTCCTTTTCTT
■■Homology search results ■■ -
sp_hit_id Q682D3
Definition sp|Q682D3|XRCC2_ARATH DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana
Align length 27
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918290|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_G03.
(397 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q682D3|XRCC2_ARATH DNA repair protein XRCC2 homolog OS=Arabid... 31 2.2
sp|Q9URY8|SULH2_SCHPO Probable sulfate permease C869.05c OS=Schi... 30 3.7
sp|Q75BE5|ATG14_ASHGO Autophagy-related protein 14 OS=Ashbya gos... 29 6.4

>sp|Q682D3|XRCC2_ARATH DNA repair protein XRCC2 homolog
OS=Arabidopsis thaliana GN=XRCC2 PE=2 SV=2
Length = 372

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2

Query: 144 VLQALESCFLFEYFNTVHYGNLWKLVL 64
++QA SC L + +N +HYG L KLVL
Sbjct: 60 LIQAAISCILPKTWNGIHYGGLGKLVL 86


>sp|Q9URY8|SULH2_SCHPO Probable sulfate permease C869.05c
OS=Schizosaccharomyces pombe GN=SPAC869.05c PE=1 SV=1
Length = 840

Score = 30.0 bits (66), Expect = 3.7
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3

Query: 182 LSHSKFSCRYCTECYKLWRVVFF-SNTL---ILYIMGTFGSLS-CKHLR 51
L +K+ C+Y + Y W+ FF +NTL ++ I+GT S + CKH R
Sbjct: 295 LFFTKYMCQYLGKRYPRWQQAFFLTNTLRSAVVVIVGTAISYAICKHHR 343


>sp|Q75BE5|ATG14_ASHGO Autophagy-related protein 14 OS=Ashbya
gossypii GN=ATG14 PE=3 SV=1
Length = 308

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3

Query: 156 STRKFAVRELLKWLIQICSASKVNHFPIS 242
ST+KF EL +W + CS ++ +HFP S
Sbjct: 142 STQKF--EELCQWFVFTCSTTEDDHFPYS 168


tr_hit_id B4MS77
Definition tr|B4MS77|B4MS77_DROWI GK15957 OS=Drosophila willistoni
Align length 59
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918290|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_G03.
(397 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4MS77|B4MS77_DROWI GK15957 OS=Drosophila willistoni GN=GK159... 35 2.4
tr|A5ALD4|A5ALD4_VITVI Putative uncharacterized protein OS=Vitis... 33 7.0
tr|B0EI58|B0EI58_ENTDI Rap GTPase-activating protein, putative O... 33 7.1
tr|Q1ZNL9|Q1ZNL9_9VIBR UDP-N-acetylmuramoyl-tripeptide--D-alanyl... 33 9.2
tr|Q28XZ8|Q28XZ8_DROPS Transporter OS=Drosophila pseudoobscura p... 33 9.2
tr|B4GGC9|B4GGC9_DROPE GL17158 OS=Drosophila persimilis GN=GL171... 33 9.2
tr|B3MCR4|B3MCR4_DROAN GF13386 OS=Drosophila ananassae GN=GF1338... 33 9.2

>tr|B4MS77|B4MS77_DROWI GK15957 OS=Drosophila willistoni GN=GK15957
PE=4 SV=1
Length = 656

Score = 34.7 bits (78), Expect = 2.4
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = -2

Query: 363 LVRSLVW--LFDGVMIFLKPLCIRLLS-SILYRMVVQFATSLQMRWENGLLYSQ-SRFG 199
LVRSL FDGV+ FLKP +LL + Y V Q SL + + N ++YS +RFG
Sbjct: 295 LVRSLTLPGAFDGVLYFLKPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYSSYNRFG 353


>tr|A5ALD4|A5ALD4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_044038 PE=4 SV=1
Length = 1070

Score = 33.1 bits (74), Expect = 7.0
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2

Query: 110 SKRKQLSKACSTLYNIDKKICCERATEVAHPNLLCE*SKPFSHLI*SEVANCTTILYKML 289
S R L AC TL ++KK+ C+ +++ P C +K + ++ + Y L
Sbjct: 360 SNRTYLPPACYTLSKVEKKLFCQTLSQLKVPEGYCSNTKNLVSMEDLKLYGLKSHDYHAL 419

Query: 290 LSNLIQSGLRKIMTPSNNH 346
+ L+ LR ++ H
Sbjct: 420 MQQLLPVSLRSVLPKHVRH 438


>tr|B0EI58|B0EI58_ENTDI Rap GTPase-activating protein, putative
OS=Entamoeba dispar SAW760 GN=EDI_276740 PE=4 SV=1
Length = 811

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = +3

Query: 24 CRRSSCQQTPQMFTRQASKGSHNVQY*SIRKENNSPKLVALCTISTRKFAVRELLKWLIQ 203
CR+++ +Q + R +G +N ++ +++ L+ALC S A++ L K
Sbjct: 281 CRQTNIEQFLPILNRFLPEGENNKEFVNLKSSKGDTALIALCNASMNIDAMKILCKNEAD 340

Query: 204 ICSASKVNHFPISFEVR 254
+ + FP+ + ++
Sbjct: 341 VNVQTMAEDFPLYYAIK 357


>tr|Q1ZNL9|Q1ZNL9_9VIBR
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase OS=Vibrio angustum S14 GN=VAS14_19871 PE=3 SV=1
Length = 460

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -1

Query: 283 LVQNGCTICHLTSNEMGKWFTLLAEQIWMSHFSSSLTANFLVDIVQSAT 137
LVQNG I +L SN++ W LLA+ ++ + S A++ + ++ T
Sbjct: 213 LVQNGTAIINLESNDLALWQPLLADHQVLTFSTDSHQADYFAEEIKITT 261


>tr|Q28XZ8|Q28XZ8_DROPS Transporter OS=Drosophila pseudoobscura
pseudoobscura GN=GA14253 PE=3 SV=2
Length = 656

Score = 32.7 bits (73), Expect = 9.2
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Frame = -2

Query: 363 LVRSLVW--LFDGVMIFLKPLCIRLL-SSILYRMVVQFATSLQMRWENGLLYSQ-SRFG 199
LVR+L FDGV+ FL+P +LL + + Y V Q SL + + N ++YS +RFG
Sbjct: 295 LVRALTLPGAFDGVLYFLRPQWHKLLEAQVWYAAVTQVFFSLAICFGNIIMYSSYNRFG 353


>tr|B4GGC9|B4GGC9_DROPE GL17158 OS=Drosophila persimilis GN=GL17158
PE=4 SV=1
Length = 657

Score = 32.7 bits (73), Expect = 9.2
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Frame = -2

Query: 363 LVRSLVW--LFDGVMIFLKPLCIRLL-SSILYRMVVQFATSLQMRWENGLLYSQ-SRFG 199
LVR+L FDGV+ FL+P +LL + + Y V Q SL + + N ++YS +RFG
Sbjct: 296 LVRALTLPGAFDGVLYFLRPQWHKLLEAQVWYAAVTQVFFSLAICFGNIIMYSSYNRFG 354


>tr|B3MCR4|B3MCR4_DROAN GF13386 OS=Drosophila ananassae GN=GF13386
PE=4 SV=1
Length = 645

Score = 32.7 bits (73), Expect = 9.2
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -2

Query: 354 SLVWLFDGVMIFLKPLCIRLLS-SILYRMVVQFATSLQMRWENGLLYSQ-SRFG 199
SL FDGV+ FL+P +LL + Y V Q SL + + N ++YS +RFG
Sbjct: 289 SLPGAFDGVLYFLRPQWHKLLEPQVWYAAVTQVFFSLAICFGNIIMYSSYNRFG 342