BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918292|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_G05.
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A5UMY7|SRP54_METS3 Signal recognition 54 kDa protein OS=Metha...    31   2.7  
sp|Q9UJL9|ZN643_HUMAN Zinc finger protein 643 OS=Homo sapiens GN...    30   4.6  
sp|O83309|Y285_TREPA Uncharacterized protein TP_0285 OS=Treponem...    30   7.8  
sp|Q28RJ0|UREF_JANSC Urease accessory protein ureF OS=Jannaschia...    30   7.9  

>sp|A5UMY7|SRP54_METS3 Signal recognition 54 kDa protein
           OS=Methanobrevibacter smithii (strain PS / ATCC 35061 /
           DSM 861) GN=srp54 PE=3 SV=2
          Length = 445

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +1

Query: 343 PGLSSHLSFKPQRISSMYCDVSGACSTTSSLCRQLHKKSSNPS 471
           PGL   +  KP +I  +    SG  +T   LCR L KK  NP+
Sbjct: 91  PGLD--IDVKPYKILFLGLQGSGKTTTIGKLCRYLQKKGFNPA 131


>sp|Q9UJL9|ZN643_HUMAN Zinc finger protein 643 OS=Homo sapiens
           GN=ZNF643 PE=2 SV=1
          Length = 432

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 200 KKCGKIHLHPCSLSNPPQI-SGKEKGHCFFCIGHRRYSIGAMKALSQQIQACPVT 361
           K+CGK   HP SL+   +I +G++   C  C      SIG ++ L   ++  P T
Sbjct: 236 KECGKTFRHPSSLTQHVRIHTGEKPYECRVCEKAFSQSIGLIQHLRTHVREKPFT 290


>sp|O83309|Y285_TREPA Uncharacterized protein TP_0285 OS=Treponema
           pallidum GN=TP_0285 PE=4 SV=1
          Length = 359

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 21  SLNLFNETINKQSLDNCRPSIFAYPGTPVLYKYTHLGWAGNVAQIIKTSQGDVCIC 188
           SL++F + +   +L +    I  YPG  VL + + LGW  +V +       D+C C
Sbjct: 127 SLSVFGDPVLYPALCDVVREILKYPGLSVLIETSGLGWQESVVR-------DLCEC 175


>sp|Q28RJ0|UREF_JANSC Urease accessory protein ureF OS=Jannaschia
           sp. (strain CCS1) GN=ureF PE=3 SV=1
          Length = 220

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 249 GGLLRLQGWRWILPHFLTQGYIYTHHLE 166
           GGLLRL   +W+ P F    Y Y+H LE
Sbjct: 12  GGLLRLS--QWLSPAFPVSAYAYSHGLE 37

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918292|Adiantum capillus-veneris mRNA, clone:
YMU001_000111_G05.
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******