NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918312
Clone id YMU001_000112_A09
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCAT
AGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAG
CTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCAT
CTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTT
CGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTT
CATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCG
AGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCC
CATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAG
■■Homology search results ■■ -
sp_hit_id O64416
Definition sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea
Align length 118
Score (bit) 154.0
E-value 2.0e-37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918312|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_A09.
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   149   6e-36
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   148   1e-35
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   147   2e-35
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   147   3e-35
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   147   3e-35
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   146   4e-35
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   146   4e-35
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   145   7e-35
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   145   9e-35
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   145   1e-34
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   144   2e-34
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   144   3e-34
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   144   3e-34
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   144   3e-34
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   144   3e-34
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   143   3e-34
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   143   3e-34
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   143   3e-34
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   142   6e-34
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   142   6e-34
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   142   6e-34
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   142   6e-34
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   142   8e-34
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   142   8e-34
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   142   1e-33
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   142   1e-33
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   142   1e-33
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...   141   1e-33

>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  154 bits (390), Expect = 2e-37
 Identities = 71/118 (60%), Positives = 85/118 (72%)
 Frame = +2

Query: 125 SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 304
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 305 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 478
           ++ GW PCIEFD  G+V RE     GYYDGRYW MWKLPMFGC D+A+VLREI EC K
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKK 149


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  152 bits (383), Expect = 1e-36
 Identities = 69/120 (57%), Positives = 85/120 (70%)
 Frame = +2

Query: 119 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 298
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 299 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 478
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  149 bits (376), Expect = 6e-36
 Identities = 69/128 (53%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
 Frame = +2

Query: 110 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 277
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 278 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 454
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 455 REIAECAK 478
           +E+ EC K
Sbjct: 142 KEVGECKK 149


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  148 bits (373), Expect = 1e-35
 Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 3/122 (2%)
 Frame = +2

Query: 122 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 292
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 293 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 472
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E+ E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 473 AK 478
            K
Sbjct: 137 IK 138


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  147 bits (371), Expect = 2e-35
 Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 5/125 (4%)
 Frame = +2

Query: 119 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 286
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 287 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 463
           K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 464 AECAK 478
            E  K
Sbjct: 145 QEAKK 149


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  147 bits (370), Expect = 3e-35
 Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
 Frame = +2

Query: 122 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 289
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 290 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 469
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 470 CAK 478
             K
Sbjct: 146 AKK 148


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  147 bits (370), Expect = 3e-35
 Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
 Frame = +2

Query: 122 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 289
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 290 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 469
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 470 CAK 478
             K
Sbjct: 146 AKK 148


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  146 bits (369), Expect = 4e-35
 Identities = 71/123 (57%), Positives = 90/123 (73%), Gaps = 4/123 (3%)
 Frame = +2

Query: 122 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 292
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 293 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 469
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 470 CAK 478
             K
Sbjct: 150 AKK 152


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  146 bits (369), Expect = 4e-35
 Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
 Frame = +2

Query: 122 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 289
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 290 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           +VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 467 ECAK 478
           EC K
Sbjct: 148 ECKK 151


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  145 bits (367), Expect = 7e-35
 Identities = 69/123 (56%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
 Frame = +2

Query: 122 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 292
           F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 293 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 469
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 470 CAK 478
           C K
Sbjct: 145 CKK 147
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 123
Score (bit) 238.0
E-value 1.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918312|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_A09.
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   238   1e-61
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   163   5e-39
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   161   1e-38
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   161   1e-38
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   161   1e-38
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   159   7e-38
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   156   6e-37
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   155   7e-37
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   155   7e-37
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   153   4e-36
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   153   5e-36
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   152   6e-36
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   152   1e-35
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   151   1e-35
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   150   2e-35
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   150   2e-35
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   150   2e-35
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   150   3e-35
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   149   5e-35
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   148   2e-34
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   146   4e-34
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   146   6e-34

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  238 bits (606), Expect = 1e-61
 Identities = 108/123 (87%), Positives = 117/123 (95%)
 Frame = +2

Query: 110 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 289
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 290 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 469
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 470 CAK 478
           CAK
Sbjct: 142 CAK 144


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  166 bits (420), Expect = 5e-40
 Identities = 79/122 (64%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 467 EC 472
           EC
Sbjct: 147 EC 148


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  163 bits (412), Expect = 5e-39
 Identities = 78/122 (63%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 467 EC 472
           EC
Sbjct: 147 EC 148


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  161 bits (408), Expect = 1e-38
 Identities = 75/122 (61%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 467 EC 472
           EC
Sbjct: 182 EC 183


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  161 bits (408), Expect = 1e-38
 Identities = 75/122 (61%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 467 EC 472
           EC
Sbjct: 152 EC 153


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  161 bits (408), Expect = 1e-38
 Identities = 76/122 (62%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 467 EC 472
           EC
Sbjct: 152 EC 153


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  159 bits (402), Expect = 7e-38
 Identities = 73/122 (59%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 467 EC 472
           EC
Sbjct: 151 EC 152


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  158 bits (399), Expect = 1e-37
 Identities = 74/121 (61%), Positives = 89/121 (73%), Gaps = 3/121 (2%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 36  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 466
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 96  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 155

Query: 467 E 469
           E
Sbjct: 156 E 156


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  156 bits (394), Expect = 6e-37
 Identities = 71/121 (58%), Positives = 87/121 (71%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 475
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 476 K 478
           K
Sbjct: 152 K 152


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  155 bits (393), Expect = 7e-37
 Identities = 72/121 (59%), Positives = 87/121 (71%)
 Frame = +2

Query: 116 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 295
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 296 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 475
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 476 K 478
           K
Sbjct: 152 K 152